RNA–Protein interactions for RNA: ENST00000292779.3

CCDC116-201, Transcript of coiled-coil domain containing 116, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC116, Length 2,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116-201ENST00000292779 ZNF530Q6P9A1 599 aaPredicted RBP18.47■□□□□ 0.55
CCDC116-201ENST00000292779 LMO7Q8WWI1 1683 aa18.47■□□□□ 0.55
CCDC116-201ENST00000292779 PIP4K2BP78356 416 aa18.47■□□□□ 0.55
CCDC116-201ENST00000292779 AKAP4Q5JQC9 854 aa18.47■□□□□ 0.55
CCDC116-201ENST00000292779 MPRIPQ6WCQ1 1025 aa18.47■□□□□ 0.55
CCDC116-201ENST00000292779 PTMSP20962 102 aa18.46■□□□□ 0.55
CCDC116-201ENST00000292779 TEFQ10587 303 aa18.46■□□□□ 0.54
CCDC116-201ENST00000292779 SKOR2Q2VWA4 1001 aaPredicted RBP18.46■□□□□ 0.54
CCDC116-201ENST00000292779 PLEKHO1Q53GL0 409 aaPredicted RBP18.46■□□□□ 0.54
CCDC116-201ENST00000292779 CLEC17AQ6ZS10 378 aa18.46■□□□□ 0.54
CCDC116-201ENST00000292779 PANK2Q9BZ23 570 aa18.46■□□□□ 0.54
CCDC116-201ENST00000292779 BTBD11A6QL63 1104 aa18.45■□□□□ 0.54
CCDC116-201ENST00000292779 FAM43AQ8N2R8 423 aa18.45■□□□□ 0.54
CCDC116-201ENST00000292779 SSH3Q8TE77 659 aa18.45■□□□□ 0.54
CCDC116-201ENST00000292779 ESYT1Q9BSJ8 1104 aa18.45■□□□□ 0.54
CCDC116-201ENST00000292779 SRCIN1Q9C0H9 1055 aa18.45■□□□□ 0.54
CCDC116-201ENST00000292779 CHPF2Q9P2E5 772 aa18.45■□□□□ 0.54
CCDC116-201ENST00000292779 STAP2Q9UGK3 403 aa18.45■□□□□ 0.54
CCDC116-201ENST00000292779 RILPL2Q969X0 211 aa18.44■□□□□ 0.54
CCDC116-201ENST00000292779 TRIM6-TRIM34B2RNG4 842 aa18.44■□□□□ 0.54
CCDC116-201ENST00000292779 ANKRD24Q8TF21 1146 aa18.44■□□□□ 0.54
CCDC116-201ENST00000292779 AHDC1Q5TGY3 1603 aaPredicted RBP18.43■□□□□ 0.54
CCDC116-201ENST00000292779 BAG4O95429 457 aaKnown RBP18.43■□□□□ 0.54
CCDC116-201ENST00000292779 HOXB7P09629 217 aa18.43■□□□□ 0.54
CCDC116-201ENST00000292779 MRE11P49959 708 aa18.43■□□□□ 0.54
CCDC116-201ENST00000292779 IL1RAPL2Q9NP60 686 aa18.43■□□□□ 0.54
CCDC116-201ENST00000292779 CHMLP26374 656 aa18.43■□□□□ 0.54
CCDC116-201ENST00000292779 AMOTQ4VCS5 1084 aa18.43■□□□□ 0.54
CCDC116-201ENST00000292779 PPP1R42Q7Z4L9 355 aa18.43■□□□□ 0.54
CCDC116-201ENST00000292779 NUCB2P80303 420 aa18.42■□□□□ 0.54
CCDC116-201ENST00000292779 PHLPP1O60346 1717 aa18.42■□□□□ 0.54
CCDC116-201ENST00000292779 GOLGA6L22H0YM25 854 aa18.42■□□□□ 0.54
CCDC116-201ENST00000292779 ANXA1P04083 346 aa18.42■□□□□ 0.54
CCDC116-201ENST00000292779 C1orf141Q5JVX7 400 aa18.42■□□□□ 0.54
CCDC116-201ENST00000292779 UNC5CLQ8IV45 518 aa18.42■□□□□ 0.54
CCDC116-201ENST00000292779 ZGPATQ8N5A5 531 aaKnown RBP18.42■□□□□ 0.54
CCDC116-201ENST00000292779 GRPEL1Q9HAV7 217 aa18.42■□□□□ 0.54
CCDC116-201ENST00000292779 PI4KAP2A4QPH2 592 aa18.41■□□□□ 0.54
CCDC116-201ENST00000292779 RNMTO43148 476 aaKnown RBP18.41■□□□□ 0.54
CCDC116-201ENST00000292779 CYP2E1P05181 493 aaPredicted RBP18.41■□□□□ 0.54
CCDC116-201ENST00000292779 NBPF7P0C2Y1 421 aaPredicted RBP18.41■□□□□ 0.54
CCDC116-201ENST00000292779 PKP1Q13835 747 aa18.41■□□□□ 0.54
CCDC116-201ENST00000292779 POLA2Q14181 598 aa18.41■□□□□ 0.54
CCDC116-201ENST00000292779 PI4KAP1Q8N8J0 262 aa18.41■□□□□ 0.54
CCDC116-201ENST00000292779 DNAAF4Q8WXU2 420 aa18.41■□□□□ 0.54
CCDC116-201ENST00000292779 CWC22Q9HCG8 908 aaKnown RBP18.41■□□□□ 0.54
CCDC116-201ENST00000292779 SURF6O75683 361 aaKnown RBP18.4■□□□□ 0.54
CCDC116-201ENST00000292779 BEND3Q5T5X7 828 aa18.4■□□□□ 0.54
CCDC116-201ENST00000292779 ISY1Q9ULR0 285 aaKnown RBP18.4■□□□□ 0.54
CCDC116-201ENST00000292779 NCAPD2Q15021 1401 aa18.4■□□□□ 0.54
CCDC116-201ENST00000292779 COL16A1Q07092 1604 aaPredicted RBP18.4■□□□□ 0.54
CCDC116-201ENST00000292779 AOX1Q06278 1338 aa18.4■□□□□ 0.54
CCDC116-201ENST00000292779 NUTM1Q86Y26 1132 aa18.4■□□□□ 0.54
CCDC116-201ENST00000292779 ERBB3P21860 1342 aa18.4■□□□□ 0.54
CCDC116-201ENST00000292779 CAMTA1Q9Y6Y1 1673 aa18.4■□□□□ 0.54
CCDC116-201ENST00000292779 UBAP1LF5GYI3 381 aa18.39■□□□□ 0.54
CCDC116-201ENST00000292779 RAB11FIP3O75154 756 aa18.39■□□□□ 0.54
CCDC116-201ENST00000292779 NEK4P51957 841 aa18.39■□□□□ 0.54
CCDC116-201ENST00000292779 CHMP4AQ9BY43 222 aa18.39■□□□□ 0.54
CCDC116-201ENST00000292779 ANO2Q9NQ90 1003 aa18.39■□□□□ 0.54
CCDC116-201ENST00000292779 SRGAP3O43295 1099 aa18.39■□□□□ 0.53
CCDC116-201ENST00000292779 GAS2L3Q86XJ1 694 aa18.39■□□□□ 0.53
CCDC116-201ENST00000292779 PALD1Q9ULE6 856 aa18.39■□□□□ 0.53
CCDC116-201ENST00000292779 ADCY9O60503 1353 aa18.38■□□□□ 0.53
CCDC116-201ENST00000292779 CPDO75976 1380 aa18.38■□□□□ 0.53
CCDC116-201ENST00000292779 MCCP23508 829 aa18.38■□□□□ 0.53
CCDC116-201ENST00000292779 RHPN1Q8TCX5 695 aa18.38■□□□□ 0.53
CCDC116-201ENST00000292779 MCTP1Q6DN14 999 aa18.37■□□□□ 0.53
CCDC116-201ENST00000292779 KLHL40Q2TBA0 621 aa18.36■□□□□ 0.53
CCDC116-201ENST00000292779 DBF4Q9UBU7 674 aaPredicted RBP18.36■□□□□ 0.53
CCDC116-201ENST00000292779 DDX49Q9Y6V7 483 aaKnown RBP18.36■□□□□ 0.53
CCDC116-201ENST00000292779 TOM1O60784 492 aa18.35■□□□□ 0.53
CCDC116-201ENST00000292779 GIGYF1O75420 1035 aaPredicted RBP18.35■□□□□ 0.53
CCDC116-201ENST00000292779 KIF1BPQ96EK5 621 aa18.35■□□□□ 0.53
CCDC116-201ENST00000292779 TMX3Q96JJ7 454 aa18.35■□□□□ 0.53
CCDC116-201ENST00000292779 PRDM11Q9NQV5 511 aa18.35■□□□□ 0.53
CCDC116-201ENST00000292779 PRAMEF22A3QJZ6 481 aa18.35■□□□□ 0.53
CCDC116-201ENST00000292779 MAP4K4O95819 1239 aaPredicted RBP18.35■□□□□ 0.53
CCDC116-201ENST00000292779 ANAPC15P60006 121 aa18.35■□□□□ 0.53
CCDC116-201ENST00000292779 PI4K2BQ8TCG2 481 aa18.35■□□□□ 0.53
CCDC116-201ENST00000292779 IL25Q9H293 177 aa18.35■□□□□ 0.53
CCDC116-201ENST00000292779 ZDHHC9Q9Y397 364 aa18.35■□□□□ 0.53
CCDC116-201ENST00000292779 PROSER3Q2NL68 480 aa18.34■□□□□ 0.53
CCDC116-201ENST00000292779 RRAGDQ9NQL2 400 aaPredicted RBP18.34■□□□□ 0.53
CCDC116-201ENST00000292779 OVOS2A0A0G2JMS6 1433 aa18.34■□□□□ 0.53
CCDC116-201ENST00000292779 COL22A1Q8NFW1 1626 aaPredicted RBP18.34■□□□□ 0.53
CCDC116-201ENST00000292779 SIPA1L3O60292 1781 aaPredicted RBP18.33■□□□□ 0.53
CCDC116-201ENST00000292779 MCM2P49736 904 aa18.33■□□□□ 0.53
CCDC116-201ENST00000292779 CERKQ8TCT0 537 aa18.33■□□□□ 0.53
CCDC116-201ENST00000292779 NLRP2Q9NX02 1062 aa18.33■□□□□ 0.53
CCDC116-201ENST00000292779 HEG1Q9ULI3 1381 aa18.33■□□□□ 0.52
CCDC116-201ENST00000292779 LMBRD1Q9NUN5 540 aa18.33■□□□□ 0.52
CCDC116-201ENST00000292779 MAP3K2Q9Y2U5 619 aa18.33■□□□□ 0.52
CCDC116-201ENST00000292779 IL17RAQ96F46 866 aa18.32■□□□□ 0.52
CCDC116-201ENST00000292779 HSP90AB4PQ58FF6 505 aa18.31■□□□□ 0.52
CCDC116-201ENST00000292779 NOL8Q76FK4 1167 aaKnown RBP18.3■□□□□ 0.52
CCDC116-201ENST00000292779 COL5A2P05997 1499 aaPredicted RBP18.3■□□□□ 0.52
CCDC116-201ENST00000292779 CSB-PGBD3P0DP91 1061 aa18.3■□□□□ 0.52
CCDC116-201ENST00000292779 CUL4AQ13619 759 aa18.3■□□□□ 0.52
CCDC116-201ENST00000292779 KSR2Q6VAB6 950 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms