RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 HSP90AA1P07900 732 aaKnown RBP10.75□□□□□ -0.69
PTPDC1-201ENST00000288976 PRIM1P49642 420 aaKnown RBP10.75□□□□□ -0.69
PTPDC1-201ENST00000288976 KCNQ3O43525 872 aa10.75□□□□□ -0.69
PTPDC1-201ENST00000288976 SSH1Q8WYL5 1049 aa10.75□□□□□ -0.69
PTPDC1-201ENST00000288976 SMC4Q9NTJ3 1288 aa10.75□□□□□ -0.69
PTPDC1-201ENST00000288976 PDE3AQ14432 1141 aa10.75□□□□□ -0.69
PTPDC1-201ENST00000288976 ZNF496Q96IT1 587 aaPredicted RBP10.75□□□□□ -0.69
PTPDC1-201ENST00000288976 STK31Q9BXU1 1019 aa10.74□□□□□ -0.69
PTPDC1-201ENST00000288976 SCN7AQ01118 1682 aa10.74□□□□□ -0.69
PTPDC1-201ENST00000288976 C4BP0C0L5 1744 aa10.74□□□□□ -0.69
PTPDC1-201ENST00000288976 ANKRD36CQ5JPF3 1778 aa10.74□□□□□ -0.69
PTPDC1-201ENST00000288976 AAMPQ13685 434 aa10.74□□□□□ -0.69
PTPDC1-201ENST00000288976 DBF4Q9UBU7 674 aaPredicted RBP10.73□□□□□ -0.69
PTPDC1-201ENST00000288976 SLC39A6Q13433 755 aa10.73□□□□□ -0.69
PTPDC1-201ENST00000288976 HDGFL1Q5TGJ6 251 aa10.73□□□□□ -0.69
PTPDC1-201ENST00000288976 HYPKQ9NX55 129 aa10.73□□□□□ -0.69
PTPDC1-201ENST00000288976 ATP10DQ9P241 1426 aa10.73□□□□□ -0.69
PTPDC1-201ENST00000288976 ZKSCAN2Q63HK3 967 aa10.73□□□□□ -0.69
PTPDC1-201ENST00000288976 API5Q9BZZ5 524 aaKnown RBP10.72□□□□□ -0.69
PTPDC1-201ENST00000288976 SUPT16HQ9Y5B9 1047 aaKnown RBP10.72□□□□□ -0.69
PTPDC1-201ENST00000288976 ABCC4O15439 1325 aa10.72□□□□□ -0.69
PTPDC1-201ENST00000288976 RGL2O15211 777 aa10.72□□□□□ -0.69
PTPDC1-201ENST00000288976 KRT24Q2M2I5 525 aa10.72□□□□□ -0.69
PTPDC1-201ENST00000288976 ASAP1Q9ULH1 1129 aa10.72□□□□□ -0.69
PTPDC1-201ENST00000288976 BCAR3O75815 825 aa10.72□□□□□ -0.69
PTPDC1-201ENST00000288976 DDX21Q9NR30 783 aaKnown RBP eCLIP10.72□□□□□ -0.69
PTPDC1-201ENST00000288976 CNTNAP4Q9C0A0 1308 aa10.71□□□□□ -0.69
PTPDC1-201ENST00000288976 STARD3NLO95772 234 aa10.71□□□□□ -0.69
PTPDC1-201ENST00000288976 SLC27A3Q5K4L6 730 aa10.71□□□□□ -0.69
PTPDC1-201ENST00000288976 ACSBG1Q96GR2 724 aa10.71□□□□□ -0.69
PTPDC1-201ENST00000288976 PDIA6Q15084 440 aa10.7□□□□□ -0.7
PTPDC1-201ENST00000288976 ATF7IPQ6VMQ6 1270 aa10.7□□□□□ -0.7
PTPDC1-201ENST00000288976 SYTL4Q96C24 671 aaPredicted RBP10.7□□□□□ -0.7
PTPDC1-201ENST00000288976 NOB1Q9ULX3 412 aaKnown RBP10.7□□□□□ -0.7
PTPDC1-201ENST00000288976 RC3H1Q5TC82 1133 aaKnown RBP10.7□□□□□ -0.7
PTPDC1-201ENST00000288976 LRP10Q7Z4F1 713 aa10.7□□□□□ -0.7
PTPDC1-201ENST00000288976 CHMP4BQ9H444 224 aaKnown RBP10.7□□□□□ -0.7
PTPDC1-201ENST00000288976 LOC102724428A0A0B4J2F2 783 aa10.69□□□□□ -0.7
PTPDC1-201ENST00000288976 SIK1P57059 783 aa10.69□□□□□ -0.7
PTPDC1-201ENST00000288976 UBR3Q6ZT12 1888 aa10.69□□□□□ -0.7
PTPDC1-201ENST00000288976 C4AP0C0L4 1744 aa10.69□□□□□ -0.7
PTPDC1-201ENST00000288976 KCNQ2O43526 872 aa10.69□□□□□ -0.7
PTPDC1-201ENST00000288976 SLC4A2P04920 1241 aa10.69□□□□□ -0.7
PTPDC1-201ENST00000288976 CYP19A1P11511 503 aaPredicted RBP10.69□□□□□ -0.7
PTPDC1-201ENST00000288976 CHPF2Q9P2E5 772 aa10.69□□□□□ -0.7
PTPDC1-201ENST00000288976 PLSCR1O15162 318 aa10.69□□□□□ -0.7
PTPDC1-201ENST00000288976 ELL2O00472 640 aaPredicted RBP10.68□□□□□ -0.7
PTPDC1-201ENST00000288976 FLIIQ13045 1269 aa10.68□□□□□ -0.7
PTPDC1-201ENST00000288976 AFDNP55196 1824 aaKnown RBP10.68□□□□□ -0.7
PTPDC1-201ENST00000288976 SLC4A9Q96Q91 983 aa10.68□□□□□ -0.7
PTPDC1-201ENST00000288976 TRIM27P14373 513 aa10.68□□□□□ -0.7
PTPDC1-201ENST00000288976 DZIP1LQ8IYY4 767 aaKnown RBP10.68□□□□□ -0.7
PTPDC1-201ENST00000288976 LAMB2P55268 1798 aa10.68□□□□□ -0.7
PTPDC1-201ENST00000288976 DDX58O95786 925 aaKnown RBP10.68□□□□□ -0.7
PTPDC1-201ENST00000288976 KLHL34Q8N239 644 aa10.68□□□□□ -0.7
PTPDC1-201ENST00000288976 COL24A1Q17RW2 1714 aa10.67□□□□□ -0.7
PTPDC1-201ENST00000288976 RBM42Q9BTD8 480 aaKnown RBP10.67□□□□□ -0.7
PTPDC1-201ENST00000288976 PRAMEF22A3QJZ6 481 aa10.67□□□□□ -0.7
PTPDC1-201ENST00000288976 ATP6V1AP38606 617 aa10.67□□□□□ -0.7
PTPDC1-201ENST00000288976 TUBGCP6Q96RT7 1819 aa10.67□□□□□ -0.7
PTPDC1-201ENST00000288976 EIF2S2P20042 333 aaKnown RBP10.67□□□□□ -0.7
PTPDC1-201ENST00000288976 IL6STP40189 918 aaPredicted RBP10.67□□□□□ -0.7
PTPDC1-201ENST00000288976 INTS3Q68E01 1043 aaKnown RBP10.67□□□□□ -0.7
PTPDC1-201ENST00000288976 CCDC125Q86Z20 511 aa10.67□□□□□ -0.7
PTPDC1-201ENST00000288976 CCDC87Q9NVE4 849 aa10.67□□□□□ -0.7
PTPDC1-201ENST00000288976 A0A087WZG4 1122 aa10.66□□□□□ -0.7
PTPDC1-201ENST00000288976 CCT4P50991 539 aaKnown RBP10.66□□□□□ -0.7
PTPDC1-201ENST00000288976 USP16Q9Y5T5 823 aa10.66□□□□□ -0.7
PTPDC1-201ENST00000288976 ADCY9O60503 1353 aa10.66□□□□□ -0.7
PTPDC1-201ENST00000288976 PTCD1O75127 700 aaKnown RBP10.66□□□□□ -0.7
PTPDC1-201ENST00000288976 DNAJC10Q8IXB1 793 aa10.66□□□□□ -0.7
PTPDC1-201ENST00000288976 FTSJ3Q8IY81 847 aaKnown RBP10.66□□□□□ -0.7
PTPDC1-201ENST00000288976 MVPQ14764 893 aaKnown RBP10.65□□□□□ -0.7
PTPDC1-201ENST00000288976 BCL2L13Q9BXK5 485 aa10.65□□□□□ -0.7
PTPDC1-201ENST00000288976 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.65□□□□□ -0.7
PTPDC1-201ENST00000288976 ISY1Q9ULR0 285 aaKnown RBP10.65□□□□□ -0.7
PTPDC1-201ENST00000288976 MYH14Q7Z406 1995 aaKnown RBP10.65□□□□□ -0.7
PTPDC1-201ENST00000288976 KSR2Q6VAB6 950 aa10.65□□□□□ -0.7
PTPDC1-201ENST00000288976 DDX19BQ9UMR2 479 aa10.65□□□□□ -0.7
PTPDC1-201ENST00000288976 ITPK1Q13572 414 aa10.65□□□□□ -0.7
PTPDC1-201ENST00000288976 FRAT1Q92837 279 aaPredicted RBP10.65□□□□□ -0.7
PTPDC1-201ENST00000288976 NBPF26B4DH59 902 aa10.65□□□□□ -0.71
PTPDC1-201ENST00000288976 NBPF14Q5TI25 921 aa10.65□□□□□ -0.71
PTPDC1-201ENST00000288976 NBPF10Q6P3W6 841 aaKnown RBP10.65□□□□□ -0.71
PTPDC1-201ENST00000288976 INTS5Q6P9B9 1019 aaKnown RBP10.65□□□□□ -0.71
PTPDC1-201ENST00000288976 NBPF15Q8N660 670 aa10.65□□□□□ -0.71
PTPDC1-201ENST00000288976 CCNL1Q9UK58 526 aaPredicted RBP10.65□□□□□ -0.71
PTPDC1-201ENST00000288976 NUP98P52948 1817 aa10.64□□□□□ -0.71
PTPDC1-201ENST00000288976 MSH5O43196 834 aa10.64□□□□□ -0.71
PTPDC1-201ENST00000288976 PLBD2Q8NHP8 589 aa10.64□□□□□ -0.71
PTPDC1-201ENST00000288976 CRKLP46109 303 aaKnown RBP10.64□□□□□ -0.71
PTPDC1-201ENST00000288976 COL15A1P39059 1388 aa10.64□□□□□ -0.71
PTPDC1-201ENST00000288976 ERVV-1B6SEH8 477 aa10.64□□□□□ -0.71
PTPDC1-201ENST00000288976 G2E3Q7L622 706 aa10.64□□□□□ -0.71
PTPDC1-201ENST00000288976 LINC00116Q8NCU8 138 aa10.64□□□□□ -0.71
PTPDC1-201ENST00000288976 TRIM37O94972 964 aa10.63□□□□□ -0.71
PTPDC1-201ENST00000288976 PROSER3Q2NL68 480 aa10.63□□□□□ -0.71
PTPDC1-201ENST00000288976 ALDH1L1O75891 902 aa10.63□□□□□ -0.71
PTPDC1-201ENST00000288976 ADRA2BP18089 450 aa10.63□□□□□ -0.71
PTPDC1-201ENST00000288976 FKBP5Q13451 457 aaPredicted RBP10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms