RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 NUTM1Q86Y26 1132 aa15.29■□□□□ 0.04
HERC6-202ENST00000273960 ANKRD44Q8N8A2 993 aa15.29■□□□□ 0.04
HERC6-202ENST00000273960 ZSCAN22P10073 491 aaPredicted RBP15.29■□□□□ 0.04
HERC6-202ENST00000273960 ANO6Q4KMQ2 910 aa15.29■□□□□ 0.04
HERC6-202ENST00000273960 ZNF428Q96B54 188 aa15.29■□□□□ 0.04
HERC6-202ENST00000273960 TAOK2Q9UL54 1235 aa15.29■□□□□ 0.04
HERC6-202ENST00000273960 CEBPZQ03701 1054 aaKnown RBP15.29■□□□□ 0.04
HERC6-202ENST00000273960 CEP135Q66GS9 1140 aa15.29■□□□□ 0.04
HERC6-202ENST00000273960 CTIFO43310 598 aaKnown RBP15.28■□□□□ 0.04
HERC6-202ENST00000273960 GNAI1P63096 354 aa15.28■□□□□ 0.04
HERC6-202ENST00000273960 SPG7Q9UQ90 795 aa15.28■□□□□ 0.04
HERC6-202ENST00000273960 TCEANC2Q96MN5 208 aa15.28■□□□□ 0.04
HERC6-202ENST00000273960 ADGRB3O60242 1522 aa15.28■□□□□ 0.04
HERC6-202ENST00000273960 DIP2CQ9Y2E4 1556 aa15.28■□□□□ 0.04
HERC6-202ENST00000273960 DEPDC5O75140 1603 aa15.27■□□□□ 0.04
HERC6-202ENST00000273960 LIG1P18858 919 aa15.27■□□□□ 0.04
HERC6-202ENST00000273960 POLKQ9UBT6 870 aa15.27■□□□□ 0.04
HERC6-202ENST00000273960 VWDEQ8N2E2 1590 aa15.27■□□□□ 0.04
HERC6-202ENST00000273960 CAPN2P17655 700 aa15.27■□□□□ 0.04
HERC6-202ENST00000273960 FBXO38Q6PIJ6 1188 aa15.27■□□□□ 0.04
HERC6-202ENST00000273960 NEK11Q8NG66 645 aa15.27■□□□□ 0.04
HERC6-202ENST00000273960 METP08581 1390 aa15.27■□□□□ 0.03
HERC6-202ENST00000273960 SMTNL1A8MU46 457 aa15.27■□□□□ 0.03
HERC6-202ENST00000273960 LARGE1O95461 756 aa15.27■□□□□ 0.03
HERC6-202ENST00000273960 LTKP29376 864 aa15.27■□□□□ 0.03
HERC6-202ENST00000273960 SULT6B1Q6IMI4 303 aa15.27■□□□□ 0.03
HERC6-202ENST00000273960 CACTINQ8WUQ7 758 aaKnown RBP15.27■□□□□ 0.03
HERC6-202ENST00000273960 CLIP2Q9UDT6 1046 aa15.27■□□□□ 0.03
HERC6-202ENST00000273960 GABPB1Q06547 395 aaPredicted RBP15.26■□□□□ 0.03
HERC6-202ENST00000273960 CFAP44Q96MT7 982 aa15.26■□□□□ 0.03
HERC6-202ENST00000273960 DNAJC25Q9H1X3 360 aa15.26■□□□□ 0.03
HERC6-202ENST00000273960 SHPRHQ149N8 1683 aa15.26■□□□□ 0.03
HERC6-202ENST00000273960 ABCC4O15439 1325 aa15.26■□□□□ 0.03
HERC6-202ENST00000273960 SLC4A2P04920 1241 aa15.26■□□□□ 0.03
HERC6-202ENST00000273960 AMPHP49418 695 aa15.26■□□□□ 0.03
HERC6-202ENST00000273960 AK2P54819 239 aa15.26■□□□□ 0.03
HERC6-202ENST00000273960 MCM10Q7L590 875 aa15.26■□□□□ 0.03
HERC6-202ENST00000273960 IQGAP1P46940 1657 aa15.26■□□□□ 0.03
HERC6-202ENST00000273960 PPFIA3O75145 1194 aa15.26■□□□□ 0.03
HERC6-202ENST00000273960 CUL4AQ13619 759 aa15.26■□□□□ 0.03
HERC6-202ENST00000273960 NFE2L2Q16236 605 aa15.26■□□□□ 0.03
HERC6-202ENST00000273960 ZSCAN25Q6NSZ9 544 aa15.26■□□□□ 0.03
HERC6-202ENST00000273960 LAMC1P11047 1609 aa15.25■□□□□ 0.03
HERC6-202ENST00000273960 F13A1P00488 732 aa15.25■□□□□ 0.03
HERC6-202ENST00000273960 MCM2P49736 904 aa15.25■□□□□ 0.03
HERC6-202ENST00000273960 TYRO3Q06418 890 aa15.25■□□□□ 0.03
HERC6-202ENST00000273960 CCDC144BQ3MJ40 725 aa15.25■□□□□ 0.03
HERC6-202ENST00000273960 CCDC144CPQ8IYA2 1237 aa15.25■□□□□ 0.03
HERC6-202ENST00000273960 IL16Q14005 1332 aa15.25■□□□□ 0.03
HERC6-202ENST00000273960 SBNO2Q9Y2G9 1366 aa15.25■□□□□ 0.03
HERC6-202ENST00000273960 GJB2P29033 226 aa15.25■□□□□ 0.03
HERC6-202ENST00000273960 HNRNPH2P55795 449 aaKnown RBP15.25■□□□□ 0.03
HERC6-202ENST00000273960 DACT1Q9NYF0 836 aa15.25■□□□□ 0.03
HERC6-202ENST00000273960 AMOTL2Q9Y2J4 779 aa15.25■□□□□ 0.03
HERC6-202ENST00000273960 MSH6P52701 1360 aa15.25■□□□□ 0.03
HERC6-202ENST00000273960 CHMLP26374 656 aa15.25■□□□□ 0.03
HERC6-202ENST00000273960 ERCC4Q92889 916 aaPredicted RBP15.25■□□□□ 0.03
HERC6-202ENST00000273960 NUP62CLQ9H1M0 184 aa15.25■□□□□ 0.03
HERC6-202ENST00000273960 TNMDQ9H2S6 317 aa15.25■□□□□ 0.03
HERC6-202ENST00000273960 CBX8Q9HC52 389 aa15.25■□□□□ 0.03
HERC6-202ENST00000273960 CWC27Q6UX04 472 aaKnown RBP15.24■□□□□ 0.03
HERC6-202ENST00000273960 NOL10Q9BSC4 688 aaKnown RBP15.24■□□□□ 0.03
HERC6-202ENST00000273960 TNRQ92752 1358 aa15.24■□□□□ 0.03
HERC6-202ENST00000273960 CASTP20810 708 aaKnown RBP15.24■□□□□ 0.03
HERC6-202ENST00000273960 MAP3K11Q16584 847 aa15.24■□□□□ 0.03
HERC6-202ENST00000273960 USP16Q9Y5T5 823 aa15.24■□□□□ 0.03
HERC6-202ENST00000273960 STK3Q13188 491 aa15.23■□□□□ 0.03
HERC6-202ENST00000273960 PTPN14Q15678 1187 aa15.23■□□□□ 0.03
HERC6-202ENST00000273960 ERCC6LQ2NKX8 1250 aa15.23■□□□□ 0.03
HERC6-202ENST00000273960 G2E3Q7L622 706 aa15.23■□□□□ 0.03
HERC6-202ENST00000273960 RASEFQ8IZ41 740 aa15.23■□□□□ 0.03
HERC6-202ENST00000273960 BICD2Q8TD16 824 aa15.23■□□□□ 0.03
HERC6-202ENST00000273960 NLRP6P59044 892 aa15.23■□□□□ 0.03
HERC6-202ENST00000273960 RPAP2Q8IXW5 612 aaPredicted RBP15.23■□□□□ 0.03
HERC6-202ENST00000273960 FAM200AQ8TCP9 573 aa15.23■□□□□ 0.03
HERC6-202ENST00000273960 ARHGAP45Q92619 1136 aa15.23■□□□□ 0.03
HERC6-202ENST00000273960 FCHSD2O94868 740 aa15.22■□□□□ 0.03
HERC6-202ENST00000273960 HMMRO75330 724 aa15.22■□□□□ 0.03
HERC6-202ENST00000273960 LRRN4CLQ8ND94 238 aa15.22■□□□□ 0.03
HERC6-202ENST00000273960 MRVI1Q9Y6F6 885 aa15.22■□□□□ 0.03
HERC6-202ENST00000273960 HSP90AB2PQ58FF8 381 aa15.22■□□□□ 0.03
HERC6-202ENST00000273960 ACEP12821 1306 aa15.21■□□□□ 0.03
HERC6-202ENST00000273960 RBM6P78332 1123 aaKnown RBP15.21■□□□□ 0.03
HERC6-202ENST00000273960 C10orf67Q8IYJ2 551 aa15.21■□□□□ 0.03
HERC6-202ENST00000273960 ZNF397Q8NF99 534 aaPredicted RBP15.21■□□□□ 0.03
HERC6-202ENST00000273960 INTS4Q96HW7 963 aaKnown RBP15.21■□□□□ 0.03
HERC6-202ENST00000273960 DNAJC2Q99543 621 aaKnown RBP15.21■□□□□ 0.03
HERC6-202ENST00000273960 ZCCHC17Q9NP64 241 aaKnown RBP15.21■□□□□ 0.03
HERC6-202ENST00000273960 CALCOCO1Q9P1Z2 691 aa15.21■□□□□ 0.03
HERC6-202ENST00000273960 MORC2Q9Y6X9 1032 aaPredicted RBP15.21■□□□□ 0.03
HERC6-202ENST00000273960 RIMBP3CA6NJZ7 1639 aa15.21■□□□□ 0.03
HERC6-202ENST00000273960 RIMBP3BA6NNM3 1639 aa15.21■□□□□ 0.03
HERC6-202ENST00000273960 RIMBP3Q9UFD9 1639 aa15.21■□□□□ 0.03
HERC6-202ENST00000273960 GLI2P10070 1586 aa15.21■□□□□ 0.03
HERC6-202ENST00000273960 LMTK2Q8IWU2 1503 aa15.21■□□□□ 0.03
HERC6-202ENST00000273960 CAMSAP1Q5T5Y3 1602 aa15.21■□□□□ 0.03
HERC6-202ENST00000273960 ZNF165P49910 485 aa15.21■□□□□ 0.03
HERC6-202ENST00000273960 SKIDA1Q1XH10 827 aa15.21■□□□□ 0.03
HERC6-202ENST00000273960 FAM177A1Q8N128 213 aaPredicted RBP15.21■□□□□ 0.03
HERC6-202ENST00000273960 RPAP1Q9BWH6 1393 aaPredicted RBP15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms