RNA–Protein interactions for RNA: ENST00000266743.6

SYCP3-201, Transcript of synaptonemal complex protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCP3, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP3-201ENST00000266743 PHKG2P15735 406 aa13.83□□□□□ -0.2
SYCP3-201ENST00000266743 TSPYL2Q9H2G4 693 aaPredicted RBP13.83□□□□□ -0.2
SYCP3-201ENST00000266743 C4AP0C0L4 1744 aa13.83□□□□□ -0.2
SYCP3-201ENST00000266743 FLT4P35916 1363 aa13.83□□□□□ -0.2
SYCP3-201ENST00000266743 KDRP35968 1356 aa13.83□□□□□ -0.2
SYCP3-201ENST00000266743 PKD1L3Q7Z443 1732 aa13.82□□□□□ -0.2
SYCP3-201ENST00000266743 GLTPD2A6NH11 291 aa13.82□□□□□ -0.2
SYCP3-201ENST00000266743 POTECB2RU33 542 aa13.82□□□□□ -0.2
SYCP3-201ENST00000266743 RPS6KA4O75676 772 aa13.82□□□□□ -0.2
SYCP3-201ENST00000266743 TESK2Q96S53 571 aa13.82□□□□□ -0.2
SYCP3-201ENST00000266743 PUS7Q96PZ0 661 aaKnown RBP13.81□□□□□ -0.2
SYCP3-201ENST00000266743 EYA1Q99502 592 aa13.81□□□□□ -0.2
SYCP3-201ENST00000266743 ST20-MTHFSA0A0A6YYL1 179 aa13.8□□□□□ -0.2
SYCP3-201ENST00000266743 FAM161AQ3B820 660 aa13.8□□□□□ -0.2
SYCP3-201ENST00000266743 RC3H1Q5TC82 1133 aaKnown RBP13.8□□□□□ -0.2
SYCP3-201ENST00000266743 IFNL2Q8IZJ0 200 aa13.8□□□□□ -0.2
SYCP3-201ENST00000266743 PTCD1O75127 700 aaKnown RBP13.79□□□□□ -0.2
SYCP3-201ENST00000266743 POTEIP0CG38 1075 aa13.79□□□□□ -0.2
SYCP3-201ENST00000266743 POTEJP0CG39 1038 aa13.79□□□□□ -0.2
SYCP3-201ENST00000266743 CNTNAP4Q9C0A0 1308 aa13.79□□□□□ -0.2
SYCP3-201ENST00000266743 BRCA1P38398 1863 aaKnown RBP13.78□□□□□ -0.2
SYCP3-201ENST00000266743 POLRMTO00411 1230 aaKnown RBP13.78□□□□□ -0.2
SYCP3-201ENST00000266743 LMNB1P20700 586 aa13.78□□□□□ -0.2
SYCP3-201ENST00000266743 IFNLR1Q8IU57 520 aaPredicted RBP13.78□□□□□ -0.2
SYCP3-201ENST00000266743 TNRC6CQ9HCJ0 1690 aaKnown RBP13.78□□□□□ -0.2
SYCP3-201ENST00000266743 CRKLP46109 303 aaKnown RBP13.77□□□□□ -0.21
SYCP3-201ENST00000266743 CLCN6P51797 869 aa13.77□□□□□ -0.21
SYCP3-201ENST00000266743 RASEFQ8IZ41 740 aa13.77□□□□□ -0.21
SYCP3-201ENST00000266743 USP42Q9H9J4 1324 aaKnown RBP13.77□□□□□ -0.21
SYCP3-201ENST00000266743 KDM6AO15550 1401 aaPredicted RBP13.76□□□□□ -0.21
SYCP3-201ENST00000266743 NCAPD2Q15021 1401 aa13.76□□□□□ -0.21
SYCP3-201ENST00000266743 NFKBIEO00221 500 aa13.76□□□□□ -0.21
SYCP3-201ENST00000266743 NUBP1P53384 320 aa13.76□□□□□ -0.21
SYCP3-201ENST00000266743 ZNF579Q8NAF0 562 aaKnown RBP13.76□□□□□ -0.21
SYCP3-201ENST00000266743 FAM212AQ96EL1 285 aa13.76□□□□□ -0.21
SYCP3-201ENST00000266743 ARFGEF1Q9Y6D6 1849 aa13.76□□□□□ -0.21
SYCP3-201ENST00000266743 TM4SF1P30408 202 aa13.75□□□□□ -0.21
SYCP3-201ENST00000266743 LBX1P52954 281 aa13.75□□□□□ -0.21
SYCP3-201ENST00000266743 SPOCK2Q92563 424 aa13.75□□□□□ -0.21
SYCP3-201ENST00000266743 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.75□□□□□ -0.21
SYCP3-201ENST00000266743 TONSLQ96HA7 1378 aa13.74□□□□□ -0.21
SYCP3-201ENST00000266743 DCAF8Q5TAQ9 597 aa13.74□□□□□ -0.21
SYCP3-201ENST00000266743 USPL1Q5W0Q7 1092 aa13.74□□□□□ -0.21
SYCP3-201ENST00000266743 PRDM10Q9NQV6 1147 aa13.74□□□□□ -0.21
SYCP3-201ENST00000266743 ZC3H4Q9UPT8 1303 aaKnown RBP13.73□□□□□ -0.21
SYCP3-201ENST00000266743 VEGFBP49765 207 aa13.73□□□□□ -0.21
SYCP3-201ENST00000266743 CABP4P57796 275 aa13.73□□□□□ -0.21
SYCP3-201ENST00000266743 CARD14Q9BXL6 1004 aa13.73□□□□□ -0.21
SYCP3-201ENST00000266743 CNTNAP1P78357 1384 aa13.72□□□□□ -0.21
SYCP3-201ENST00000266743 KIF24Q5T7B8 1368 aa13.72□□□□□ -0.21
SYCP3-201ENST00000266743 SBF1O95248 1867 aa13.72□□□□□ -0.21
SYCP3-201ENST00000266743 ERVV-2B6SEH9 535 aa13.72□□□□□ -0.21
SYCP3-201ENST00000266743 CTCFP49711 727 aaPredicted RBP13.72□□□□□ -0.21
SYCP3-201ENST00000266743 NFIXQ14938 502 aa13.72□□□□□ -0.21
SYCP3-201ENST00000266743 INTS5Q6P9B9 1019 aaKnown RBP13.72□□□□□ -0.21
SYCP3-201ENST00000266743 ABHD8Q96I13 439 aa13.72□□□□□ -0.21
SYCP3-201ENST00000266743 WASHC2AQ641Q2 1341 aa13.71□□□□□ -0.21
SYCP3-201ENST00000266743 GABBR2O75899 941 aa13.71□□□□□ -0.21
SYCP3-201ENST00000266743 DDNO94850 711 aaPredicted RBP13.71□□□□□ -0.21
SYCP3-201ENST00000266743 C2CD5Q86YS7 1000 aa13.71□□□□□ -0.21
SYCP3-201ENST00000266743 TTLL6Q8N841 843 aa13.71□□□□□ -0.21
SYCP3-201ENST00000266743 AIDAQ96BJ3 306 aa13.71□□□□□ -0.21
SYCP3-201ENST00000266743 MYH14Q7Z406 1995 aaKnown RBP13.71□□□□□ -0.22
SYCP3-201ENST00000266743 EIF4A2Q14240 407 aaKnown RBP13.7□□□□□ -0.22
SYCP3-201ENST00000266743 ERFEQ4G0M1 354 aa13.7□□□□□ -0.22
SYCP3-201ENST00000266743 DPY19L2Q6NUT2 758 aa13.7□□□□□ -0.22
SYCP3-201ENST00000266743 CARMIL3Q8ND23 1372 aa13.7□□□□□ -0.22
SYCP3-201ENST00000266743 ZPR1O75312 459 aa13.69□□□□□ -0.22
SYCP3-201ENST00000266743 TNNT2P45379 298 aaPredicted RBP13.69□□□□□ -0.22
SYCP3-201ENST00000266743 ZNF530Q6P9A1 599 aaPredicted RBP13.69□□□□□ -0.22
SYCP3-201ENST00000266743 DNAJC10Q8IXB1 793 aa13.69□□□□□ -0.22
SYCP3-201ENST00000266743 CCDC24Q8N4L8 307 aa13.69□□□□□ -0.22
SYCP3-201ENST00000266743 NFATC2IPQ8NCF5 419 aa13.69□□□□□ -0.22
SYCP3-201ENST00000266743 WBP1LQ9NX94 342 aa13.69□□□□□ -0.22
SYCP3-201ENST00000266743 POLKQ9UBT6 870 aa13.69□□□□□ -0.22
SYCP3-201ENST00000266743 COL5A3P25940 1745 aaPredicted RBP13.68□□□□□ -0.22
SYCP3-201ENST00000266743 C21orf2O43822 256 aa13.68□□□□□ -0.22
SYCP3-201ENST00000266743 SERPINB2P05120 415 aa13.68□□□□□ -0.22
SYCP3-201ENST00000266743 HSPA8P11142 646 aaKnown RBP13.68□□□□□ -0.22
SYCP3-201ENST00000266743 BICDL1Q6ZP65 573 aa13.68□□□□□ -0.22
SYCP3-201ENST00000266743 PHF12Q96QT6 1004 aa13.68□□□□□ -0.22
SYCP3-201ENST00000266743 BCL2L12Q9HB09 334 aa13.68□□□□□ -0.22
SYCP3-201ENST00000266743 CCDC85CA6NKD9 419 aa13.67□□□□□ -0.22
SYCP3-201ENST00000266743 ZNF622Q969S3 477 aaKnown RBP eCLIP13.67□□□□□ -0.22
SYCP3-201ENST00000266743 PASKQ96RG2 1323 aa13.66□□□□□ -0.22
SYCP3-201ENST00000266743 H0YIN7 160 aa13.66□□□□□ -0.22
SYCP3-201ENST00000266743 MTHFSP49914 203 aa13.66□□□□□ -0.22
SYCP3-201ENST00000266743 GSE1Q14687 1217 aa13.66□□□□□ -0.22
SYCP3-201ENST00000266743 SOS1Q07889 1333 aaPredicted RBP13.65□□□□□ -0.22
SYCP3-201ENST00000266743 HSP90AB1P08238 724 aaKnown RBP13.65□□□□□ -0.22
SYCP3-201ENST00000266743 MLLT1Q03111 559 aaPredicted RBP13.65□□□□□ -0.22
SYCP3-201ENST00000266743 PLEKHO1Q53GL0 409 aaPredicted RBP13.65□□□□□ -0.22
SYCP3-201ENST00000266743 AEBP1Q8IUX7 1158 aa13.65□□□□□ -0.22
SYCP3-201ENST00000266743 TIAM2Q8IVF5 1701 aa13.64□□□□□ -0.23
SYCP3-201ENST00000266743 TMEM88BA6NKF7 163 aa13.64□□□□□ -0.23
SYCP3-201ENST00000266743 ZBTB1Q9Y2K1 713 aa13.64□□□□□ -0.23
SYCP3-201ENST00000266743 ITGBL1O95965 494 aaPredicted RBP13.63□□□□□ -0.23
SYCP3-201ENST00000266743 SLC39A6Q13433 755 aa13.63□□□□□ -0.23
SYCP3-201ENST00000266743 EAPPQ56P03 285 aaPredicted RBP13.63□□□□□ -0.23
SYCP3-201ENST00000266743 TAF1DQ9H5J8 278 aaPredicted RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms