RNA–Protein interactions for RNA: ENST00000265036.9

DEPDC1B-201, Transcript of DEP domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1B, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-201ENST00000265036 TSR2Q969E8 191 aaKnown RBP9.47□□□□□ -0.89
DEPDC1B-201ENST00000265036 ARXQ96QS3 562 aa9.47□□□□□ -0.89
DEPDC1B-201ENST00000265036 LAMB4A4D0S4 1761 aa9.47□□□□□ -0.89
DEPDC1B-201ENST00000265036 CCDC87Q9NVE4 849 aa9.47□□□□□ -0.89
DEPDC1B-201ENST00000265036 RTCBQ9Y3I0 505 aaKnown RBP9.47□□□□□ -0.89
DEPDC1B-201ENST00000265036 ELL2O00472 640 aaPredicted RBP9.46□□□□□ -0.89
DEPDC1B-201ENST00000265036 INTS5Q6P9B9 1019 aaKnown RBP9.46□□□□□ -0.89
DEPDC1B-201ENST00000265036 WWC1Q8IX03 1113 aa9.46□□□□□ -0.89
DEPDC1B-201ENST00000265036 MBIPQ9NS73 344 aa9.46□□□□□ -0.89
DEPDC1B-201ENST00000265036 SRP68Q9UHB9 627 aaKnown RBP9.46□□□□□ -0.89
DEPDC1B-201ENST00000265036 CNTNAP4Q9C0A0 1308 aa9.46□□□□□ -0.89
DEPDC1B-201ENST00000265036 EIF4A1P60842 406 aaKnown RBP9.46□□□□□ -0.9
DEPDC1B-201ENST00000265036 KLHL34Q8N239 644 aa9.46□□□□□ -0.9
DEPDC1B-201ENST00000265036 COL15A1P39059 1388 aa9.45□□□□□ -0.9
DEPDC1B-201ENST00000265036 ANXA1P04083 346 aa9.45□□□□□ -0.9
DEPDC1B-201ENST00000265036 EIF2S2P20042 333 aaKnown RBP9.45□□□□□ -0.9
DEPDC1B-201ENST00000265036 NGEFQ8N5V2 710 aa9.45□□□□□ -0.9
DEPDC1B-201ENST00000265036 STARD3NLO95772 234 aa9.45□□□□□ -0.9
DEPDC1B-201ENST00000265036 SNRPA1P09661 255 aaKnown RBP9.45□□□□□ -0.9
DEPDC1B-201ENST00000265036 VSIG10Q8N0Z9 540 aa9.45□□□□□ -0.9
DEPDC1B-201ENST00000265036 CHL1O00533 1208 aa9.44□□□□□ -0.9
DEPDC1B-201ENST00000265036 GIGYF1O75420 1035 aaPredicted RBP9.44□□□□□ -0.9
DEPDC1B-201ENST00000265036 SSFA2P28290 1259 aa9.44□□□□□ -0.9
DEPDC1B-201ENST00000265036 ARHGEF1Q92888 912 aaKnown RBP9.44□□□□□ -0.9
DEPDC1B-201ENST00000265036 CFAP44Q96MT7 982 aa9.44□□□□□ -0.9
DEPDC1B-201ENST00000265036 SPON1Q9HCB6 807 aa9.44□□□□□ -0.9
DEPDC1B-201ENST00000265036 SPINK5Q9NQ38 1064 aaPredicted RBP9.44□□□□□ -0.9
DEPDC1B-201ENST00000265036 PPP1R1BQ9UD71 204 aaPredicted RBP9.44□□□□□ -0.9
DEPDC1B-201ENST00000265036 SOS1Q07889 1333 aaPredicted RBP9.44□□□□□ -0.9
DEPDC1B-201ENST00000265036 LRP5O75197 1615 aa9.44□□□□□ -0.9
DEPDC1B-201ENST00000265036 RPS6KA4O75676 772 aa9.44□□□□□ -0.9
DEPDC1B-201ENST00000265036 MYL6BP14649 208 aa9.44□□□□□ -0.9
DEPDC1B-201ENST00000265036 RFC4P35249 363 aa9.44□□□□□ -0.9
DEPDC1B-201ENST00000265036 TRAPPC3LQ5T215 181 aa9.44□□□□□ -0.9
DEPDC1B-201ENST00000265036 MTFR1LQ9H019 292 aa9.44□□□□□ -0.9
DEPDC1B-201ENST00000265036 NBPF26B4DH59 902 aa9.43□□□□□ -0.9
DEPDC1B-201ENST00000265036 NBPF10Q6P3W6 841 aaKnown RBP9.43□□□□□ -0.9
DEPDC1B-201ENST00000265036 NBPF15Q8N660 670 aa9.43□□□□□ -0.9
DEPDC1B-201ENST00000265036 TBC1D2BQ9UPU7 963 aa9.43□□□□□ -0.9
DEPDC1B-201ENST00000265036 TCERG1O14776 1098 aaKnown RBP9.43□□□□□ -0.9
DEPDC1B-201ENST00000265036 PTGER2P43116 358 aa9.43□□□□□ -0.9
DEPDC1B-201ENST00000265036 PROSER3Q2NL68 480 aa9.43□□□□□ -0.9
DEPDC1B-201ENST00000265036 RC3H1Q5TC82 1133 aaKnown RBP9.43□□□□□ -0.9
DEPDC1B-201ENST00000265036 IFT57Q9NWB7 429 aa9.43□□□□□ -0.9
DEPDC1B-201ENST00000265036 GNAI1P63096 354 aa9.42□□□□□ -0.9
DEPDC1B-201ENST00000265036 USPL1Q5W0Q7 1092 aa9.42□□□□□ -0.9
DEPDC1B-201ENST00000265036 FANCIQ9NVI1 1328 aa9.42□□□□□ -0.9
DEPDC1B-201ENST00000265036 ZNF853P0CG23 659 aa9.42□□□□□ -0.9
DEPDC1B-201ENST00000265036 FKBP8Q14318 412 aa9.42□□□□□ -0.9
DEPDC1B-201ENST00000265036 TSPYL6Q8N831 410 aa9.42□□□□□ -0.9
DEPDC1B-201ENST00000265036 ZNF428Q96B54 188 aa9.42□□□□□ -0.9
DEPDC1B-201ENST00000265036 WWC3Q9ULE0 1092 aa9.42□□□□□ -0.9
DEPDC1B-201ENST00000265036 SCN7AQ01118 1682 aa9.42□□□□□ -0.9
DEPDC1B-201ENST00000265036 USP42Q9H9J4 1324 aaKnown RBP9.41□□□□□ -0.9
DEPDC1B-201ENST00000265036 GYS1P13807 737 aa9.41□□□□□ -0.9
DEPDC1B-201ENST00000265036 HNRNPUQ00839 825 aaKnown RBP eCLIP9.41□□□□□ -0.9
DEPDC1B-201ENST00000265036 CCDC27Q2M243 656 aa9.41□□□□□ -0.9
DEPDC1B-201ENST00000265036 BICDL1Q6ZP65 573 aa9.41□□□□□ -0.9
DEPDC1B-201ENST00000265036 NPM2Q86SE8 214 aaKnown RBP9.41□□□□□ -0.9
DEPDC1B-201ENST00000265036 POTEDQ86YR6 584 aa9.41□□□□□ -0.9
DEPDC1B-201ENST00000265036 C8orf58Q8NAV2 365 aa9.41□□□□□ -0.9
DEPDC1B-201ENST00000265036 TEX13AQ9BXU3 409 aaPredicted RBP9.41□□□□□ -0.9
DEPDC1B-201ENST00000265036 EIF5P55010 431 aaKnown RBP9.41□□□□□ -0.9
DEPDC1B-201ENST00000265036 CALD1Q05682 793 aaKnown RBP9.41□□□□□ -0.9
DEPDC1B-201ENST00000265036 HDGFL1Q5TGJ6 251 aa9.41□□□□□ -0.9
DEPDC1B-201ENST00000265036 DUSP27Q5VZP5 1158 aa9.41□□□□□ -0.9
DEPDC1B-201ENST00000265036 FLAD1Q8NFF5 587 aa9.41□□□□□ -0.9
DEPDC1B-201ENST00000265036 ZPR1O75312 459 aa9.4□□□□□ -0.9
DEPDC1B-201ENST00000265036 MMP10P09238 476 aa9.4□□□□□ -0.9
DEPDC1B-201ENST00000265036 CDCA7LQ96GN5 454 aa9.4□□□□□ -0.9
DEPDC1B-201ENST00000265036 SGIP1Q9BQI5 828 aa9.4□□□□□ -0.9
DEPDC1B-201ENST00000265036 CHPF2Q9P2E5 772 aa9.4□□□□□ -0.9
DEPDC1B-201ENST00000265036 BCORQ6W2J9 1755 aa9.4□□□□□ -0.9
DEPDC1B-201ENST00000265036 ADRA2BP18089 450 aa9.4□□□□□ -0.91
DEPDC1B-201ENST00000265036 POLD1P28340 1107 aa9.4□□□□□ -0.91
DEPDC1B-201ENST00000265036 AIMP1Q12904 312 aaKnown RBP9.4□□□□□ -0.91
DEPDC1B-201ENST00000265036 DZIP3Q86Y13 1208 aaKnown RBP9.4□□□□□ -0.91
DEPDC1B-201ENST00000265036 IL6STP40189 918 aaPredicted RBP9.39□□□□□ -0.91
DEPDC1B-201ENST00000265036 TTLL7Q6ZT98 887 aa9.39□□□□□ -0.91
DEPDC1B-201ENST00000265036 SLC16A10Q8TF71 515 aa9.39□□□□□ -0.91
DEPDC1B-201ENST00000265036 FHDC1Q9C0D6 1143 aaPredicted RBP9.39□□□□□ -0.91
DEPDC1B-201ENST00000265036 ZBTB3Q9H5J0 574 aa9.39□□□□□ -0.91
DEPDC1B-201ENST00000265036 BCL2L12Q9HB09 334 aa9.39□□□□□ -0.91
DEPDC1B-201ENST00000265036 BABAM1Q9NWV8 329 aa9.39□□□□□ -0.91
DEPDC1B-201ENST00000265036 COL24A1Q17RW2 1714 aa9.39□□□□□ -0.91
DEPDC1B-201ENST00000265036 ZNF521Q96K83 1311 aa9.38□□□□□ -0.91
DEPDC1B-201ENST00000265036 FAM177BA6PVY3 158 aa9.38□□□□□ -0.91
DEPDC1B-201ENST00000265036 EXOSC9Q06265 439 aaKnown RBP9.38□□□□□ -0.91
DEPDC1B-201ENST00000265036 DDR1Q08345 913 aa9.38□□□□□ -0.91
DEPDC1B-201ENST00000265036 CCDC24Q8N4L8 307 aa9.38□□□□□ -0.91
DEPDC1B-201ENST00000265036 NARFQ9UHQ1 456 aa9.38□□□□□ -0.91
DEPDC1B-201ENST00000265036 HMGB2P26583 209 aaKnown RBP9.38□□□□□ -0.91
DEPDC1B-201ENST00000265036 PDIA6Q15084 440 aa9.38□□□□□ -0.91
DEPDC1B-201ENST00000265036 TWISTNBQ3B726 338 aaPredicted RBP9.38□□□□□ -0.91
DEPDC1B-201ENST00000265036 NUP98P52948 1817 aa9.38□□□□□ -0.91
DEPDC1B-201ENST00000265036 AFDNP55196 1824 aaKnown RBP9.38□□□□□ -0.91
DEPDC1B-201ENST00000265036 CAMTA2O94983 1202 aa9.37□□□□□ -0.91
DEPDC1B-201ENST00000265036 HLFQ16534 295 aa9.37□□□□□ -0.91
DEPDC1B-201ENST00000265036 WDR63Q8IWG1 891 aa9.37□□□□□ -0.91
DEPDC1B-201ENST00000265036 NLGN2Q8NFZ4 835 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 221.9 ms