RNA–Protein interactions for RNA: ENST00000262812.8

COPE-201, Transcript of coatomer protein complex subunit epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPE, Length 1,141 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-201ENST00000262812 RUNDC1Q96C34 613 aa24.29■■□□□ 1.48
COPE-201ENST00000262812 COL5A3P25940 1745 aaPredicted RBP24.29■■□□□ 1.48
COPE-201ENST00000262812 VIRMAQ69YN4 1812 aaKnown RBP24.28■■□□□ 1.48
COPE-201ENST00000262812 PRAMEF22A3QJZ6 481 aa24.28■■□□□ 1.48
COPE-201ENST00000262812 ANP32CO43423 234 aa24.28■■□□□ 1.48
COPE-201ENST00000262812 CCDC184Q52MB2 194 aa24.28■■□□□ 1.48
COPE-201ENST00000262812 SOS1Q07889 1333 aaPredicted RBP24.28■■□□□ 1.48
COPE-201ENST00000262812 ZPR1O75312 459 aa24.27■■□□□ 1.48
COPE-201ENST00000262812 A1BGP04217 495 aa24.27■■□□□ 1.48
COPE-201ENST00000262812 ZNF330Q9Y3S2 320 aaPredicted RBP24.27■■□□□ 1.48
COPE-201ENST00000262812 USP16Q9Y5T5 823 aa24.27■■□□□ 1.48
COPE-201ENST00000262812 PELP1Q8IZL8 1130 aaKnown RBP24.26■■□□□ 1.47
COPE-201ENST00000262812 PNISRQ8TF01 805 aaKnown RBP24.26■■□□□ 1.47
COPE-201ENST00000262812 MYH14Q7Z406 1995 aaKnown RBP24.25■■□□□ 1.47
COPE-201ENST00000262812 SNRPA1P09661 255 aaKnown RBP24.25■■□□□ 1.47
COPE-201ENST00000262812 FKBP8Q14318 412 aa24.25■■□□□ 1.47
COPE-201ENST00000262812 USPL1Q5W0Q7 1092 aa24.25■■□□□ 1.47
COPE-201ENST00000262812 USP42Q9H9J4 1324 aaKnown RBP24.25■■□□□ 1.47
COPE-201ENST00000262812 CD2APQ9Y5K6 639 aa24.24■■□□□ 1.47
COPE-201ENST00000262812 COL24A1Q17RW2 1714 aa24.24■■□□□ 1.47
COPE-201ENST00000262812 SIPA1L3O60292 1781 aaPredicted RBP24.24■■□□□ 1.47
COPE-201ENST00000262812 GPR162Q16538 588 aa24.23■■□□□ 1.47
COPE-201ENST00000262812 COL15A1P39059 1388 aa24.22■■□□□ 1.47
COPE-201ENST00000262812 PIP4K2AP48426 406 aaPredicted RBP24.22■■□□□ 1.47
COPE-201ENST00000262812 EIF5P55010 431 aaKnown RBP24.22■■□□□ 1.47
COPE-201ENST00000262812 LMOD3Q0VAK6 560 aa24.22■■□□□ 1.47
COPE-201ENST00000262812 NARFQ9UHQ1 456 aa24.22■■□□□ 1.47
COPE-201ENST00000262812 PARP3Q9Y6F1 533 aa24.22■■□□□ 1.47
COPE-201ENST00000262812 UBR2Q8IWV8 1755 aa24.21■■□□□ 1.47
COPE-201ENST00000262812 CICQ96RK0 1608 aaPredicted RBP24.21■■□□□ 1.47
COPE-201ENST00000262812 NPM2Q86SE8 214 aaKnown RBP24.2■■□□□ 1.46
COPE-201ENST00000262812 TSPYL4Q9UJ04 414 aa24.2■■□□□ 1.46
COPE-201ENST00000262812 TBC1D2BQ9UPU7 963 aa24.2■■□□□ 1.46
COPE-201ENST00000262812 A0A087WZG4 1122 aa24.19■■□□□ 1.46
COPE-201ENST00000262812 TRIM35Q9UPQ4 493 aa24.19■■□□□ 1.46
COPE-201ENST00000262812 IL6STP40189 918 aaPredicted RBP24.18■■□□□ 1.46
COPE-201ENST00000262812 EIF4A1P60842 406 aaKnown RBP24.18■■□□□ 1.46
COPE-201ENST00000262812 WWC3Q9ULE0 1092 aa24.18■■□□□ 1.46
COPE-201ENST00000262812 LAS1LQ9Y4W2 734 aaKnown RBP24.18■■□□□ 1.46
COPE-201ENST00000262812 APAF1O14727 1248 aa24.17■■□□□ 1.46
COPE-201ENST00000262812 MRS2Q9HD23 443 aa24.17■■□□□ 1.46
COPE-201ENST00000262812 DLG5Q8TDM6 1919 aa24.16■■□□□ 1.46
COPE-201ENST00000262812 TM4SF1P30408 202 aa24.16■■□□□ 1.46
COPE-201ENST00000262812 DDR1Q08345 913 aa24.16■■□□□ 1.46
COPE-201ENST00000262812 BCL2L12Q9HB09 334 aa24.16■■□□□ 1.46
COPE-201ENST00000262812 SENP3-EIF4A1A0A087X0R7 540 aa24.15■■□□□ 1.46
COPE-201ENST00000262812 GIGYF1O75420 1035 aaPredicted RBP24.15■■□□□ 1.46
COPE-201ENST00000262812 BICDL1Q6ZP65 573 aa24.15■■□□□ 1.46
COPE-201ENST00000262812 NFIXQ14938 502 aa24.14■■□□□ 1.45
COPE-201ENST00000262812 NBPF26B4DH59 902 aa24.13■■□□□ 1.45
COPE-201ENST00000262812 NBPF10Q6P3W6 841 aaKnown RBP24.13■■□□□ 1.45
COPE-201ENST00000262812 NBPF15Q8N660 670 aa24.13■■□□□ 1.45
COPE-201ENST00000262812 POLRMTO00411 1230 aaKnown RBP24.12■■□□□ 1.45
COPE-201ENST00000262812 DZIP3Q86Y13 1208 aaKnown RBP24.12■■□□□ 1.45
COPE-201ENST00000262812 NGEFQ8N5V2 710 aa24.12■■□□□ 1.45
COPE-201ENST00000262812 C4AP0C0L4 1744 aa24.12■■□□□ 1.45
COPE-201ENST00000262812 A0A0G2JLW4 131 aa24.11■■□□□ 1.45
COPE-201ENST00000262812 YBX3P16989 372 aaKnown RBP eCLIP24.11■■□□□ 1.452e-8■□□□□ 10.7
COPE-201ENST00000262812 BABAM1Q9NWV8 329 aa24.11■■□□□ 1.45
COPE-201ENST00000262812 YY1P25490 414 aa24.1■■□□□ 1.45
COPE-201ENST00000262812 CHL1O00533 1208 aa24.09■■□□□ 1.45
COPE-201ENST00000262812 CAMTA2O94983 1202 aa24.09■■□□□ 1.45
COPE-201ENST00000262812 TBC1D9BQ66K14 1250 aa24.09■■□□□ 1.45
COPE-201ENST00000262812 SERPINB2P05120 415 aa24.08■■□□□ 1.45
COPE-201ENST00000262812 EIF2S2P20042 333 aaKnown RBP24.08■■□□□ 1.45
COPE-201ENST00000262812 TGFB2P61812 414 aa24.08■■□□□ 1.45
COPE-201ENST00000262812 MYL6BP14649 208 aa24.07■■□□□ 1.44
COPE-201ENST00000262812 DPEP1P16444 411 aa24.07■■□□□ 1.44
COPE-201ENST00000262812 C10orf71Q711Q0 1435 aa24.05■■□□□ 1.44
COPE-201ENST00000262812 GRIN3BO60391 1043 aa24.05■■□□□ 1.44
COPE-201ENST00000262812 KRT24Q2M2I5 525 aa24.05■■□□□ 1.44
COPE-201ENST00000262812 NECTIN2Q92692 538 aa24.05■■□□□ 1.44
COPE-201ENST00000262812 KDM3BQ7LBC6 1761 aa24.03■■□□□ 1.44
COPE-201ENST00000262812 CFAP44Q96MT7 982 aa24.03■■□□□ 1.44
COPE-201ENST00000262812 SETDB2Q96T68 719 aa24.03■■□□□ 1.44
COPE-201ENST00000262812 GOLGB1Q14789 3259 aaKnown RBP24.02■■□□□ 1.44
COPE-201ENST00000262812 CHRNA5P30532 468 aa24.02■■□□□ 1.44
COPE-201ENST00000262812 FAM9BQ8IZU0 186 aa24.02■■□□□ 1.44
COPE-201ENST00000262812 CCDC24Q8N4L8 307 aa24.02■■□□□ 1.44
COPE-201ENST00000262812 PXDNLA1KZ92 1463 aa24.01■■□□□ 1.43
COPE-201ENST00000262812 MBIPQ9NS73 344 aa24.01■■□□□ 1.43
COPE-201ENST00000262812 BCS1LQ9Y276 419 aa24.01■■□□□ 1.43
COPE-201ENST00000262812 UTRNP46939 3433 aa24.01■■□□□ 1.43
COPE-201ENST00000262812 KCNA3P22001 575 aa24■■□□□ 1.43
COPE-201ENST00000262812 CALD1Q05682 793 aaKnown RBP24■■□□□ 1.43
COPE-201ENST00000262812 HLFQ16534 295 aa24■■□□□ 1.43
COPE-201ENST00000262812 TTLL7Q6ZT98 887 aa24■■□□□ 1.43
COPE-201ENST00000262812 ZNF652Q9Y2D9 606 aa24■■□□□ 1.43
COPE-201ENST00000262812 SALL2Q9Y467 1007 aaPredicted RBP24■■□□□ 1.43
COPE-201ENST00000262812 NPHP1O15259 732 aa23.99■■□□□ 1.43
COPE-201ENST00000262812 ANXA1P04083 346 aa23.99■■□□□ 1.43
COPE-201ENST00000262812 CLEC4GQ6UXB4 293 aa23.99■■□□□ 1.43
COPE-201ENST00000262812 ZNF853P0CG23 659 aa23.98■■□□□ 1.43
COPE-201ENST00000262812 GNAI1P63096 354 aa23.98■■□□□ 1.43
COPE-201ENST00000262812 PDIA6Q15084 440 aa23.98■■□□□ 1.43
COPE-201ENST00000262812 KIF6Q6ZMV9 814 aa23.98■■□□□ 1.43
COPE-201ENST00000262812 IFT57Q9NWB7 429 aa23.98■■□□□ 1.43
COPE-201ENST00000262812 FAM177BA6PVY3 158 aa23.97■■□□□ 1.43
COPE-201ENST00000262812 PROSER3Q2NL68 480 aa23.97■■□□□ 1.43
COPE-201ENST00000262812 ZBTB3Q9H5J0 574 aa23.97■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms