RNA–Protein interactions for RNA: ENST00000261415.11

COL4A3BP-201, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 1 (best) BASIC

Gene COL4A3BP, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-201ENST00000261415 TMOD3Q9NYL9 352 aa23.74■■□□□ 1.39
COL4A3BP-201ENST00000261415 KCPQ6ZWJ8 1503 aa23.73■■□□□ 1.39
COL4A3BP-201ENST00000261415 SBF2Q86WG5 1849 aa23.72■■□□□ 1.39
COL4A3BP-201ENST00000261415 BCL9O00512 1426 aa23.72■■□□□ 1.39
COL4A3BP-201ENST00000261415 ZKSCAN2Q63HK3 967 aa23.72■■□□□ 1.39
COL4A3BP-201ENST00000261415 EXOC6Q8TAG9 804 aa23.72■■□□□ 1.39
COL4A3BP-201ENST00000261415 NOB1Q9ULX3 412 aaKnown RBP23.72■■□□□ 1.39
COL4A3BP-201ENST00000261415 GIGYF1O75420 1035 aaPredicted RBP23.71■■□□□ 1.39
COL4A3BP-201ENST00000261415 ONECUT3O60422 494 aaPredicted RBP23.71■■□□□ 1.39
COL4A3BP-201ENST00000261415 ZNF496Q96IT1 587 aaPredicted RBP23.71■■□□□ 1.39
COL4A3BP-201ENST00000261415 PDE3AQ14432 1141 aa23.7■■□□□ 1.38
COL4A3BP-201ENST00000261415 CCDC30Q5VVM6 783 aa23.7■■□□□ 1.38
COL4A3BP-201ENST00000261415 HDGFL1Q5TGJ6 251 aa23.7■■□□□ 1.38
COL4A3BP-201ENST00000261415 PIGBQ92521 554 aa23.7■■□□□ 1.38
COL4A3BP-201ENST00000261415 NECTIN2Q92692 538 aa23.69■■□□□ 1.38
COL4A3BP-201ENST00000261415 FMNL2Q96PY5 1086 aa23.69■■□□□ 1.38
COL4A3BP-201ENST00000261415 TNNQ9UQP3 1299 aa23.69■■□□□ 1.38
COL4A3BP-201ENST00000261415 ZNF772Q68DY9 489 aaPredicted RBP23.68■■□□□ 1.38
COL4A3BP-201ENST00000261415 PRAMEF22A3QJZ6 481 aa23.68■■□□□ 1.38
COL4A3BP-201ENST00000261415 IPO8O15397 1037 aaKnown RBP23.68■■□□□ 1.38
COL4A3BP-201ENST00000261415 TRIM27P14373 513 aa23.68■■□□□ 1.38
COL4A3BP-201ENST00000261415 ATF7IPQ6VMQ6 1270 aa23.68■■□□□ 1.38
COL4A3BP-201ENST00000261415 STK31Q9BXU1 1019 aa23.68■■□□□ 1.38
COL4A3BP-201ENST00000261415 SYTL4Q96C24 671 aaPredicted RBP23.67■■□□□ 1.38
COL4A3BP-201ENST00000261415 CRBNQ96SW2 442 aa23.67■■□□□ 1.38
COL4A3BP-201ENST00000261415 NHSQ6T4R5 1651 aa23.67■■□□□ 1.38
COL4A3BP-201ENST00000261415 SLC4A2P04920 1241 aa23.67■■□□□ 1.38
COL4A3BP-201ENST00000261415 EIF2S2P20042 333 aaKnown RBP23.67■■□□□ 1.38
COL4A3BP-201ENST00000261415 SLC4A3P48751 1232 aa23.67■■□□□ 1.38
COL4A3BP-201ENST00000261415 PRIM1P49642 420 aaKnown RBP23.67■■□□□ 1.38
COL4A3BP-201ENST00000261415 PANK1Q8TE04 598 aa23.67■■□□□ 1.38
COL4A3BP-201ENST00000261415 CLUAP1Q96AJ1 413 aa23.66■■□□□ 1.38
COL4A3BP-201ENST00000261415 CHMP4AQ9BY43 222 aa23.66■■□□□ 1.38
COL4A3BP-201ENST00000261415 RLBP1P12271 317 aa23.65■■□□□ 1.38
COL4A3BP-201ENST00000261415 SEPT12Q8IYM1 358 aa23.65■■□□□ 1.38
COL4A3BP-201ENST00000261415 ARHGAP45Q92619 1136 aa23.65■■□□□ 1.38
COL4A3BP-201ENST00000261415 ACSBG1Q96GR2 724 aa23.64■■□□□ 1.38
COL4A3BP-201ENST00000261415 ASAP1Q9ULH1 1129 aa23.64■■□□□ 1.38
COL4A3BP-201ENST00000261415 BTAF1O14981 1849 aa23.64■■□□□ 1.38
COL4A3BP-201ENST00000261415 SNRPA1P09661 255 aaKnown RBP23.64■■□□□ 1.37
COL4A3BP-201ENST00000261415 DZIP1LQ8IYY4 767 aaKnown RBP23.64■■□□□ 1.37
COL4A3BP-201ENST00000261415 N4BP2Q86UW6 1770 aaPredicted RBP23.64■■□□□ 1.37
COL4A3BP-201ENST00000261415 FTSJ3Q8IY81 847 aaKnown RBP23.63■■□□□ 1.37
COL4A3BP-201ENST00000261415 ATG3Q9NT62 314 aa23.63■■□□□ 1.37
COL4A3BP-201ENST00000261415 RBM10P98175 930 aaKnown RBP23.63■■□□□ 1.37
COL4A3BP-201ENST00000261415 PDCL3Q9H2J4 239 aa23.63■■□□□ 1.37
COL4A3BP-201ENST00000261415 PTCD1O75127 700 aaKnown RBP23.62■■□□□ 1.37
COL4A3BP-201ENST00000261415 CHPF2Q9P2E5 772 aa23.62■■□□□ 1.37
COL4A3BP-201ENST00000261415 TJP1Q07157 1748 aa23.62■■□□□ 1.37
COL4A3BP-201ENST00000261415 PTPRCP08575 1304 aa23.62■■□□□ 1.37
COL4A3BP-201ENST00000261415 RGS12O14924 1447 aa23.61■■□□□ 1.37
COL4A3BP-201ENST00000261415 G2E3Q7L622 706 aa23.61■■□□□ 1.37
COL4A3BP-201ENST00000261415 COG6Q9Y2V7 657 aa23.61■■□□□ 1.37
COL4A3BP-201ENST00000261415 RBM6P78332 1123 aaKnown RBP23.6■■□□□ 1.37
COL4A3BP-201ENST00000261415 AAMPQ13685 434 aa23.59■■□□□ 1.37
COL4A3BP-201ENST00000261415 API5Q9BZZ5 524 aaKnown RBP23.59■■□□□ 1.37
COL4A3BP-201ENST00000261415 DBF4Q9UBU7 674 aaPredicted RBP23.59■■□□□ 1.37
COL4A3BP-201ENST00000261415 USP16Q9Y5T5 823 aa23.59■■□□□ 1.37
COL4A3BP-201ENST00000261415 FLIIQ13045 1269 aa23.58■■□□□ 1.37
COL4A3BP-201ENST00000261415 FAM182BQ5T319 152 aa23.58■■□□□ 1.37
COL4A3BP-201ENST00000261415 ABCC4O15439 1325 aa23.58■■□□□ 1.37
COL4A3BP-201ENST00000261415 EP400Q96L91 3159 aa23.58■■□□□ 1.37
COL4A3BP-201ENST00000261415 CICQ96RK0 1608 aaPredicted RBP23.58■■□□□ 1.37
COL4A3BP-201ENST00000261415 KCNQ2O43526 872 aa23.58■■□□□ 1.36
COL4A3BP-201ENST00000261415 ANXA1P04083 346 aa23.57■■□□□ 1.36
COL4A3BP-201ENST00000261415 MVPQ14764 893 aaKnown RBP23.57■■□□□ 1.36
COL4A3BP-201ENST00000261415 TPM2P07951 284 aa23.56■■□□□ 1.36
COL4A3BP-201ENST00000261415 TMEM57Q8N5G2 664 aa23.56■■□□□ 1.36
COL4A3BP-201ENST00000261415 PHAXQ9H814 394 aaKnown RBP23.56■■□□□ 1.36
COL4A3BP-201ENST00000261415 ZNF831Q5JPB2 1677 aa23.56■■□□□ 1.36
COL4A3BP-201ENST00000261415 FGD1P98174 961 aa23.56■■□□□ 1.36
COL4A3BP-201ENST00000261415 PROSER3Q2NL68 480 aa23.56■■□□□ 1.36
COL4A3BP-201ENST00000261415 RBM42Q9BTD8 480 aaKnown RBP23.55■■□□□ 1.36
COL4A3BP-201ENST00000261415 DDX21Q9NR30 783 aaKnown RBP eCLIP23.55■■□□□ 1.36
COL4A3BP-201ENST00000261415 FKBP5Q13451 457 aaPredicted RBP23.54■■□□□ 1.36
COL4A3BP-201ENST00000261415 PDIA6Q15084 440 aa23.54■■□□□ 1.36
COL4A3BP-201ENST00000261415 FAM161AQ3B820 660 aa23.54■■□□□ 1.36
COL4A3BP-201ENST00000261415 RGS17Q9UGC6 210 aaPredicted RBP23.54■■□□□ 1.36
COL4A3BP-201ENST00000261415 ITPRIPQ8IWB1 547 aa23.54■■□□□ 1.36
COL4A3BP-201ENST00000261415 LY75O60449 1722 aa23.53■■□□□ 1.36
COL4A3BP-201ENST00000261415 COL5A3P25940 1745 aaPredicted RBP23.53■■□□□ 1.36
COL4A3BP-201ENST00000261415 HYPKQ9NX55 129 aa23.53■■□□□ 1.36
COL4A3BP-201ENST00000261415 KRT27Q7Z3Y8 459 aa23.52■■□□□ 1.36
COL4A3BP-201ENST00000261415 SLC4A9Q96Q91 983 aa23.52■■□□□ 1.36
COL4A3BP-201ENST00000261415 PALLDQ8WX93 1383 aa23.52■■□□□ 1.35
COL4A3BP-201ENST00000261415 RXRBP28702 533 aa23.51■■□□□ 1.35
COL4A3BP-201ENST00000261415 ARFGEF2Q9Y6D5 1785 aa23.51■■□□□ 1.35
COL4A3BP-201ENST00000261415 ERBB4Q15303 1308 aa23.51■■□□□ 1.35
COL4A3BP-201ENST00000261415 PXDNLA1KZ92 1463 aa23.51■■□□□ 1.35
COL4A3BP-201ENST00000261415 PTF1AQ7RTS3 328 aa23.5■■□□□ 1.35
COL4A3BP-201ENST00000261415 TEX13AQ9BXU3 409 aaPredicted RBP23.5■■□□□ 1.35
COL4A3BP-201ENST00000261415 DDX19BQ9UMR2 479 aa23.5■■□□□ 1.35
COL4A3BP-201ENST00000261415 F6X3S4 739 aa23.5■■□□□ 1.35
COL4A3BP-201ENST00000261415 MYL6BP14649 208 aa23.5■■□□□ 1.35
COL4A3BP-201ENST00000261415 DNAJC10Q8IXB1 793 aa23.5■■□□□ 1.35
COL4A3BP-201ENST00000261415 A0A0U1RQG5 324 aaPredicted RBP23.49■■□□□ 1.35
COL4A3BP-201ENST00000261415 GOLGA6L3A6NEY3 463 aa23.49■■□□□ 1.35
COL4A3BP-201ENST00000261415 PIP4K2AP48426 406 aaPredicted RBP23.49■■□□□ 1.35
COL4A3BP-201ENST00000261415 SMARCC1Q92922 1105 aaPredicted RBP23.49■■□□□ 1.35
COL4A3BP-201ENST00000261415 PRDM4Q9UKN5 801 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms