RNA–Protein interactions for RNA: ENST00000259605.10

RNF38-201, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 5,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-201ENST00000259605 GIGYF2Q6Y7W6 1299 aaKnown RBP4.73□□□□□ -1.65
RNF38-201ENST00000259605 NLGN1Q8N2Q7 840 aa4.73□□□□□ -1.65
RNF38-201ENST00000259605 ZNF526Q8TF50 670 aaPredicted RBP4.73□□□□□ -1.65
RNF38-201ENST00000259605 SMARCE1Q969G3 411 aa4.73□□□□□ -1.65
RNF38-201ENST00000259605 KRT23Q9C075 422 aa4.73□□□□□ -1.65
RNF38-201ENST00000259605 RSPH6AQ9H0K4 717 aa4.73□□□□□ -1.65
RNF38-201ENST00000259605 NAIPQ13075 1403 aa4.73□□□□□ -1.65
RNF38-201ENST00000259605 GNAT3A8MTJ3 354 aa4.72□□□□□ -1.65
RNF38-201ENST00000259605 TTF1Q15361 905 aaPredicted RBP4.72□□□□□ -1.65
RNF38-201ENST00000259605 PANK3Q9H999 370 aa4.72□□□□□ -1.65
RNF38-201ENST00000259605 DACH1Q9UI36 760 aa4.72□□□□□ -1.65
RNF38-201ENST00000259605 SAMM50Q9Y512 469 aa4.72□□□□□ -1.65
RNF38-201ENST00000259605 PDCP20941 246 aa4.72□□□□□ -1.65
RNF38-201ENST00000259605 SLC8A3P57103 927 aa4.72□□□□□ -1.65
RNF38-201ENST00000259605 NUP133Q8WUM0 1156 aa4.72□□□□□ -1.65
RNF38-201ENST00000259605 CLUAP1Q96AJ1 413 aa4.72□□□□□ -1.65
RNF38-201ENST00000259605 DDX11Q96FC9 970 aa4.72□□□□□ -1.65
RNF38-201ENST00000259605 CRNKL1Q9BZJ0 848 aaKnown RBP4.72□□□□□ -1.65
RNF38-201ENST00000259605 NAT10Q9H0A0 1025 aaKnown RBP4.72□□□□□ -1.65
RNF38-201ENST00000259605 SULT6B1Q6IMI4 303 aa4.72□□□□□ -1.65
RNF38-201ENST00000259605 ERMNQ8TAM6 284 aa4.72□□□□□ -1.65
RNF38-201ENST00000259605 BICD2Q8TD16 824 aa4.72□□□□□ -1.65
RNF38-201ENST00000259605 GNPATO15228 680 aa4.72□□□□□ -1.65
RNF38-201ENST00000259605 UQCRFS1P1P0C7P4 283 aa4.72□□□□□ -1.65
RNF38-201ENST00000259605 FKBP4Q02790 459 aaKnown RBP eCLIP4.72□□□□□ -1.65
RNF38-201ENST00000259605 MVPQ14764 893 aaKnown RBP4.72□□□□□ -1.65
RNF38-201ENST00000259605 ODR4Q5SWX8 454 aa4.72□□□□□ -1.65
RNF38-201ENST00000259605 TMEM132EQ6IEE7 984 aa4.72□□□□□ -1.65
RNF38-201ENST00000259605 SIN3AQ96ST3 1273 aa4.72□□□□□ -1.65
RNF38-201ENST00000259605 RUFY1Q96T51 708 aa4.72□□□□□ -1.65
RNF38-201ENST00000259605 PHAXQ9H814 394 aaKnown RBP4.72□□□□□ -1.65
RNF38-201ENST00000259605 SEPT11Q9NVA2 429 aaKnown RBP4.72□□□□□ -1.65
RNF38-201ENST00000259605 HMGN5P82970 282 aaKnown RBP4.71□□□□□ -1.65
RNF38-201ENST00000259605 DCTN1Q14203 1278 aa4.71□□□□□ -1.65
RNF38-201ENST00000259605 SUPT20HL1Q3ZLR7 823 aa4.71□□□□□ -1.65
RNF38-201ENST00000259605 TTLL7Q6ZT98 887 aa4.71□□□□□ -1.65
RNF38-201ENST00000259605 RSPH3Q86UC2 560 aa4.71□□□□□ -1.65
RNF38-201ENST00000259605 ZNF354CQ86Y25 554 aa4.71□□□□□ -1.65
RNF38-201ENST00000259605 TTC16Q8NEE8 873 aa4.71□□□□□ -1.65
RNF38-201ENST00000259605 MYD88Q99836 296 aa4.71□□□□□ -1.65
RNF38-201ENST00000259605 LRRC27Q9C0I9 530 aa4.71□□□□□ -1.65
RNF38-201ENST00000259605 CEP131Q9UPN4 1083 aa4.71□□□□□ -1.65
RNF38-201ENST00000259605 ACEP12821 1306 aa4.71□□□□□ -1.66
RNF38-201ENST00000259605 FMNL1O95466 1100 aaPredicted RBP4.71□□□□□ -1.66
RNF38-201ENST00000259605 GNAI2P04899 355 aa4.71□□□□□ -1.66
RNF38-201ENST00000259605 CNGA1P29973 690 aa4.71□□□□□ -1.66
RNF38-201ENST00000259605 ARID5AQ03989 594 aa4.71□□□□□ -1.66
RNF38-201ENST00000259605 SMC1AQ14683 1233 aaKnown RBP4.71□□□□□ -1.66
RNF38-201ENST00000259605 MSANTD4Q8NCY6 345 aa4.71□□□□□ -1.66
RNF38-201ENST00000259605 ACSBG1Q96GR2 724 aa4.71□□□□□ -1.66
RNF38-201ENST00000259605 ZNF396Q96N95 335 aaPredicted RBP4.71□□□□□ -1.66
RNF38-201ENST00000259605 ZBED2Q9BTP6 218 aa4.71□□□□□ -1.66
RNF38-201ENST00000259605 IMPG2Q9BZV3 1241 aa4.71□□□□□ -1.66
RNF38-201ENST00000259605 SMC3Q9UQE7 1217 aa4.71□□□□□ -1.66
RNF38-201ENST00000259605 KIF7Q2M1P5 1343 aa4.71□□□□□ -1.66
RNF38-201ENST00000259605 FGFR1OPO95684 399 aaKnown RBP4.71□□□□□ -1.66
RNF38-201ENST00000259605 DEKP35659 375 aaKnown RBP4.71□□□□□ -1.66
RNF38-201ENST00000259605 DHX8Q14562 1220 aaKnown RBP4.71□□□□□ -1.66
RNF38-201ENST00000259605 ANKRD1Q15327 319 aa4.71□□□□□ -1.66
RNF38-201ENST00000259605 ZNF569Q5MCW4 686 aa4.71□□□□□ -1.66
RNF38-201ENST00000259605 UTP14CQ5TAP6 766 aaKnown RBP4.71□□□□□ -1.66
RNF38-201ENST00000259605 INTS3Q68E01 1043 aaKnown RBP4.71□□□□□ -1.66
RNF38-201ENST00000259605 CC2D2BQ6DHV5 1058 aa4.71□□□□□ -1.66
RNF38-201ENST00000259605 CCDC129Q6ZRS4 1044 aa4.71□□□□□ -1.66
RNF38-201ENST00000259605 ILDR1Q86SU0 546 aaPredicted RBP4.71□□□□□ -1.66
RNF38-201ENST00000259605 DZIP1LQ8IYY4 767 aaKnown RBP4.71□□□□□ -1.66
RNF38-201ENST00000259605 FAM13BQ9NYF5 915 aa4.71□□□□□ -1.66
RNF38-201ENST00000259605 FGD5Q6ZNL6 1462 aa4.71□□□□□ -1.66
RNF38-201ENST00000259605 VPS8Q8N3P4 1428 aa4.71□□□□□ -1.66
RNF38-201ENST00000259605 ANKRD50Q9ULJ7 1429 aa4.71□□□□□ -1.66
RNF38-201ENST00000259605 ARHGEF10O15013 1369 aa4.71□□□□□ -1.66
RNF38-201ENST00000259605 KIF28PB7ZC32 967 aa4.71□□□□□ -1.66
RNF38-201ENST00000259605 SRGAP2BP0DMP2 458 aa4.71□□□□□ -1.66
RNF38-201ENST00000259605 UBXN2AP68543 259 aa4.71□□□□□ -1.66
RNF38-201ENST00000259605 CCDC14Q49A88 953 aa4.71□□□□□ -1.66
RNF38-201ENST00000259605 CFAP70Q5T0N1 1121 aa4.71□□□□□ -1.66
RNF38-201ENST00000259605 GTF3C6Q969F1 213 aa4.71□□□□□ -1.66
RNF38-201ENST00000259605 FAM193BQ96PV7 902 aaPredicted RBP4.71□□□□□ -1.66
RNF38-201ENST00000259605 NAPBQ9H115 298 aa4.71□□□□□ -1.66
RNF38-201ENST00000259605 DEF6Q9H4E7 631 aa4.71□□□□□ -1.66
RNF38-201ENST00000259605 HYPKQ9NX55 129 aa4.71□□□□□ -1.66
RNF38-201ENST00000259605 RCAN3Q9UKA8 241 aa4.71□□□□□ -1.66
RNF38-201ENST00000259605 CIZ1Q9ULV3 898 aaPredicted RBP4.71□□□□□ -1.66
RNF38-201ENST00000259605 IMMTQ16891 758 aaKnown RBP4.7□□□□□ -1.66
RNF38-201ENST00000259605 KRT27Q7Z3Y8 459 aa4.7□□□□□ -1.66
RNF38-201ENST00000259605 VPS36Q86VN1 386 aa4.7□□□□□ -1.66
RNF38-201ENST00000259605 TCP11L2Q8N4U5 519 aa4.7□□□□□ -1.66
RNF38-201ENST00000259605 C22orf23Q9BZE7 217 aa4.7□□□□□ -1.66
RNF38-201ENST00000259605 TANGO6Q9C0B7 1094 aa4.7□□□□□ -1.66
RNF38-201ENST00000259605 NACA2Q9H009 215 aa4.7□□□□□ -1.66
RNF38-201ENST00000259605 ACBD3Q9H3P7 528 aa4.7□□□□□ -1.66
RNF38-201ENST00000259605 ARHGEF10LQ9HCE6 1279 aa4.7□□□□□ -1.66
RNF38-201ENST00000259605 CCDC39Q9UFE4 941 aa4.7□□□□□ -1.66
RNF38-201ENST00000259605 CALM1P0DP23 149 aa4.7□□□□□ -1.66
RNF38-201ENST00000259605 CALM2P0DP24 149 aa4.7□□□□□ -1.66
RNF38-201ENST00000259605 CALM3P0DP25 149 aa4.7□□□□□ -1.66
RNF38-201ENST00000259605 GBP2P32456 591 aaPredicted RBP4.7□□□□□ -1.66
RNF38-201ENST00000259605 RBM6P78332 1123 aaKnown RBP4.7□□□□□ -1.66
RNF38-201ENST00000259605 KRT32Q14532 448 aa4.7□□□□□ -1.66
RNF38-201ENST00000259605 TTC6Q86TZ1 520 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms