RNA–Protein interactions for RNA: ENST00000259043.11

TRA2B-201, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-201ENST00000259043 STAU1O95793 577 aaKnown RBP10.35□□□□□ -0.75
TRA2B-201ENST00000259043 GRIN2CQ14957 1233 aa10.35□□□□□ -0.75
TRA2B-201ENST00000259043 RHBDD1Q8TEB9 315 aa10.35□□□□□ -0.75
TRA2B-201ENST00000259043 BNIP3LO60238 219 aa10.34□□□□□ -0.75
TRA2B-201ENST00000259043 FURINP09958 794 aa10.34□□□□□ -0.75
TRA2B-201ENST00000259043 SKIP12755 728 aa10.34□□□□□ -0.75
TRA2B-201ENST00000259043 SIRT1Q96EB6 747 aa10.34□□□□□ -0.75
TRA2B-201ENST00000259043 CRISPLD1Q9H336 500 aa10.34□□□□□ -0.75
TRA2B-201ENST00000259043 GNB5O14775 395 aa10.33□□□□□ -0.76
TRA2B-201ENST00000259043 SCNN1DP51172 638 aa10.33□□□□□ -0.76
TRA2B-201ENST00000259043 CTBSQ01459 385 aa10.33□□□□□ -0.76
TRA2B-201ENST00000259043 PPARGC1BQ86YN6 1023 aaKnown RBP10.33□□□□□ -0.76
TRA2B-201ENST00000259043 GLMNQ92990 594 aa10.33□□□□□ -0.76
TRA2B-201ENST00000259043 SUV39H2Q9H5I1 410 aa10.33□□□□□ -0.76
TRA2B-201ENST00000259043 ETNK1Q9HBU6 452 aa10.33□□□□□ -0.76
TRA2B-201ENST00000259043 EPXP11678 715 aa10.32□□□□□ -0.76
TRA2B-201ENST00000259043 TBC1D9Q6ZT07 1266 aa10.32□□□□□ -0.76
TRA2B-201ENST00000259043 BTBD6Q96KE9 485 aa10.32□□□□□ -0.76
TRA2B-201ENST00000259043 PCDHGA11Q9Y5H2 935 aa10.32□□□□□ -0.76
TRA2B-201ENST00000259043 USP17L5A8MUK1 530 aa10.31□□□□□ -0.76
TRA2B-201ENST00000259043 LZTS3O60299 673 aaPredicted RBP10.31□□□□□ -0.76
TRA2B-201ENST00000259043 ARAFP10398 606 aa10.31□□□□□ -0.76
TRA2B-201ENST00000259043 NCOA4Q13772 614 aa10.31□□□□□ -0.76
TRA2B-201ENST00000259043 FIGNL1Q6PIW4 674 aa10.31□□□□□ -0.76
TRA2B-201ENST00000259043 Q8N3U1 123 aa10.31□□□□□ -0.76
TRA2B-201ENST00000259043 TLR1Q15399 786 aa10.3□□□□□ -0.76
TRA2B-201ENST00000259043 EML3Q32P44 896 aa10.3□□□□□ -0.76
TRA2B-201ENST00000259043 C1QTNF9BB2RNN3 333 aa10.29□□□□□ -0.76
TRA2B-201ENST00000259043 ATP9BO43861 1147 aa10.29□□□□□ -0.76
TRA2B-201ENST00000259043 PLEKHM2Q8IWE5 1019 aa10.29□□□□□ -0.76
TRA2B-201ENST00000259043 DEPDC4Q8N2C3 294 aa10.29□□□□□ -0.76
TRA2B-201ENST00000259043 NOP53Q9NZM5 478 aaKnown RBP10.29□□□□□ -0.76
TRA2B-201ENST00000259043 TMEM229AB2RXF0 380 aa10.28□□□□□ -0.76
TRA2B-201ENST00000259043 INHAP05111 366 aa10.28□□□□□ -0.76
TRA2B-201ENST00000259043 DGKGP49619 791 aa10.28□□□□□ -0.76
TRA2B-201ENST00000259043 GDF10P55107 478 aa10.28□□□□□ -0.76
TRA2B-201ENST00000259043 DNAAF2Q9NVR5 837 aaKnown RBP10.28□□□□□ -0.76
TRA2B-201ENST00000259043 PCDHGC4Q9Y5F7 938 aa10.28□□□□□ -0.76
TRA2B-201ENST00000259043 CD163Q86VB7 1156 aa10.27□□□□□ -0.77
TRA2B-201ENST00000259043 NLRP8Q86W28 1048 aa10.27□□□□□ -0.77
TRA2B-201ENST00000259043 C1orf216Q8TAB5 229 aa10.27□□□□□ -0.77
TRA2B-201ENST00000259043 ZCCHC2Q9C0B9 1178 aaKnown RBP10.27□□□□□ -0.77
TRA2B-201ENST00000259043 NOD1Q9Y239 953 aa10.27□□□□□ -0.77
TRA2B-201ENST00000259043 USP17L3A6NCW0 530 aa10.26□□□□□ -0.77
TRA2B-201ENST00000259043 USP17L4A6NCW7 530 aa10.26□□□□□ -0.77
TRA2B-201ENST00000259043 NEURL1BA8MQ27 555 aa10.26□□□□□ -0.77
TRA2B-201ENST00000259043 PLA2G4AP47712 749 aa10.26□□□□□ -0.77
TRA2B-201ENST00000259043 USP17L2Q6R6M4 530 aa10.26□□□□□ -0.77
TRA2B-201ENST00000259043 USP17L1Q7RTZ2 530 aa10.26□□□□□ -0.77
TRA2B-201ENST00000259043 GTF2IP78347 998 aa10.25□□□□□ -0.77
TRA2B-201ENST00000259043 GTF3C3Q9Y5Q9 886 aa10.25□□□□□ -0.77
TRA2B-201ENST00000259043 SLC4A9Q96Q91 983 aa10.24□□□□□ -0.77
TRA2B-201ENST00000259043 ATXN7O15265 892 aaPredicted RBP10.23□□□□□ -0.77
TRA2B-201ENST00000259043 ATP4AP20648 1035 aa10.23□□□□□ -0.77
TRA2B-201ENST00000259043 ADH6P28332 368 aa10.23□□□□□ -0.77
TRA2B-201ENST00000259043 CHRNA4P43681 627 aa10.23□□□□□ -0.77
TRA2B-201ENST00000259043 FAM182BQ5T319 152 aa10.23□□□□□ -0.77
TRA2B-201ENST00000259043 CHSY3Q70JA7 882 aa10.23□□□□□ -0.77
TRA2B-201ENST00000259043 CALR3Q96L12 384 aaKnown RBP10.23□□□□□ -0.77
TRA2B-201ENST00000259043 NIFKQ9BYG3 293 aaKnown RBP10.23□□□□□ -0.77
TRA2B-201ENST00000259043 TFIP11Q9UBB9 837 aaKnown RBP10.23□□□□□ -0.77
TRA2B-201ENST00000259043 ZBTB7BO15156 539 aaPredicted RBP10.22□□□□□ -0.77
TRA2B-201ENST00000259043 CLDN10P78369 228 aa10.22□□□□□ -0.77
TRA2B-201ENST00000259043 ZNF295-AS1Q8N0V1 137 aa10.22□□□□□ -0.77
TRA2B-201ENST00000259043 AVENQ9NQS1 362 aaPredicted RBP10.22□□□□□ -0.77
TRA2B-201ENST00000259043 KIAA1024Q9UPX6 916 aa10.22□□□□□ -0.77
TRA2B-201ENST00000259043 MAFBQ9Y5Q3 323 aaPredicted RBP10.22□□□□□ -0.77
TRA2B-201ENST00000259043 PALM3A6NDB9 673 aaPredicted RBP10.21□□□□□ -0.77
TRA2B-201ENST00000259043 SMTNP53814 917 aa10.21□□□□□ -0.77
TRA2B-201ENST00000259043 MTFR1Q15390 333 aa10.21□□□□□ -0.77
TRA2B-201ENST00000259043 AIDAQ96BJ3 306 aa10.21□□□□□ -0.77
TRA2B-201ENST00000259043 PPP1R12CQ9BZL4 782 aa10.21□□□□□ -0.77
TRA2B-201ENST00000259043 ZNF777Q9ULD5 760 aaPredicted RBP10.21□□□□□ -0.77
TRA2B-201ENST00000259043 MAPTP10636 758 aaKnown RBP10.2□□□□□ -0.78
TRA2B-201ENST00000259043 TNP2Q05952 138 aa10.2□□□□□ -0.78
TRA2B-201ENST00000259043 KRTAP4-8Q9BYQ9 185 aa10.2□□□□□ -0.78
TRA2B-201ENST00000259043 SERTAD1Q9UHV2 236 aa10.2□□□□□ -0.78
TRA2B-201ENST00000259043 KLF15Q9UIH9 416 aa10.2□□□□□ -0.78
TRA2B-201ENST00000259043 IQSEC3Q9UPP2 1182 aaPredicted RBP10.2□□□□□ -0.78
TRA2B-201ENST00000259043 DKK1O94907 266 aa10.19□□□□□ -0.78
TRA2B-201ENST00000259043 NBPF1Q3BBV0 1214 aa10.19□□□□□ -0.78
TRA2B-201ENST00000259043 TRIM50Q86XT4 487 aa10.19□□□□□ -0.78
TRA2B-201ENST00000259043 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.19□□□□□ -0.78
TRA2B-201ENST00000259043 ZMYND15Q9H091 742 aa10.19□□□□□ -0.78
TRA2B-201ENST00000259043 ZNF358Q9NW07 568 aa10.19□□□□□ -0.78
TRA2B-201ENST00000259043 MKRN1Q9UHC7 482 aaKnown RBP10.19□□□□□ -0.78
TRA2B-201ENST00000259043 A0A1W2PNR3 127 aa10.18□□□□□ -0.78
TRA2B-201ENST00000259043 DCDC2BA2VCK2 349 aa10.18□□□□□ -0.78
TRA2B-201ENST00000259043 CD33P20138 364 aa10.18□□□□□ -0.78
TRA2B-201ENST00000259043 ARSJQ5FYB0 599 aaPredicted RBP10.18□□□□□ -0.78
TRA2B-201ENST00000259043 FCHSD1Q86WN1 690 aa10.18□□□□□ -0.78
TRA2B-201ENST00000259043 HCN2Q9UL51 889 aa10.18□□□□□ -0.78
TRA2B-201ENST00000259043 USP3Q9Y6I4 520 aa10.18□□□□□ -0.78
TRA2B-201ENST00000259043 A6NJY4 79 aa10.17□□□□□ -0.78
TRA2B-201ENST00000259043 KHNYNO15037 678 aaKnown RBP10.17□□□□□ -0.78
TRA2B-201ENST00000259043 EPHA4P54764 986 aa10.17□□□□□ -0.78
TRA2B-201ENST00000259043 OGFOD1Q8N543 542 aa10.17□□□□□ -0.78
TRA2B-201ENST00000259043 TATP17735 454 aaPredicted RBP10.16□□□□□ -0.78
TRA2B-201ENST00000259043 ATP1A2P50993 1020 aa10.16□□□□□ -0.78
TRA2B-201ENST00000259043 KANK4Q5T7N3 995 aaPredicted RBP10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms