RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 ZDHHC9Q9Y397 364 aa5.1□□□□□ -1.59
UBE4A-201ENST00000252108 ST18O60284 1047 aa5.1□□□□□ -1.59
UBE4A-201ENST00000252108 CLCN1P35523 988 aa5.1□□□□□ -1.59
UBE4A-201ENST00000252108 TTC22Q5TAA0 569 aa5.1□□□□□ -1.59
UBE4A-201ENST00000252108 HOXB7P09629 217 aa5.1□□□□□ -1.59
UBE4A-201ENST00000252108 MFAP1P55081 439 aaKnown RBP5.1□□□□□ -1.59
UBE4A-201ENST00000252108 PDIA6Q15084 440 aa5.1□□□□□ -1.59
UBE4A-201ENST00000252108 ITPRIPQ8IWB1 547 aa5.1□□□□□ -1.59
UBE4A-201ENST00000252108 MYH7P12883 1935 aa5.1□□□□□ -1.59
UBE4A-201ENST00000252108 EPB41L2O43491 1005 aaKnown RBP5.1□□□□□ -1.59
UBE4A-201ENST00000252108 USP26Q9BXU7 913 aa5.1□□□□□ -1.59
UBE4A-201ENST00000252108 AOX1Q06278 1338 aa5.1□□□□□ -1.59
UBE4A-201ENST00000252108 C4AP0C0L4 1744 aa5.1□□□□□ -1.59
UBE4A-201ENST00000252108 C4BP0C0L5 1744 aa5.1□□□□□ -1.59
UBE4A-201ENST00000252108 OTUD7AQ8TE49 926 aaPredicted RBP5.1□□□□□ -1.59
UBE4A-201ENST00000252108 CWC22Q9HCG8 908 aaKnown RBP5.1□□□□□ -1.59
UBE4A-201ENST00000252108 TCHHQ07283 1943 aa5.09□□□□□ -1.59
UBE4A-201ENST00000252108 PTMAP06454 111 aaKnown RBP5.09□□□□□ -1.59
UBE4A-201ENST00000252108 NEUROD2Q15784 382 aa5.09□□□□□ -1.59
UBE4A-201ENST00000252108 KAZALD1Q96I82 304 aa5.09□□□□□ -1.59
UBE4A-201ENST00000252108 API5Q9BZZ5 524 aaKnown RBP5.09□□□□□ -1.59
UBE4A-201ENST00000252108 HMMRO75330 724 aa5.09□□□□□ -1.59
UBE4A-201ENST00000252108 CHAF1AQ13111 956 aaPredicted RBP5.09□□□□□ -1.59
UBE4A-201ENST00000252108 MYH3P11055 1940 aa5.09□□□□□ -1.59
UBE4A-201ENST00000252108 MCM2P49736 904 aa5.09□□□□□ -1.6
UBE4A-201ENST00000252108 SULT6B1Q6IMI4 303 aa5.09□□□□□ -1.6
UBE4A-201ENST00000252108 ARHGEF25Q86VW2 580 aa5.09□□□□□ -1.6
UBE4A-201ENST00000252108 RPAP2Q8IXW5 612 aaPredicted RBP5.09□□□□□ -1.6
UBE4A-201ENST00000252108 SSH3Q8TE77 659 aa5.09□□□□□ -1.6
UBE4A-201ENST00000252108 IP6K1Q92551 441 aa5.09□□□□□ -1.6
UBE4A-201ENST00000252108 MCM5P33992 734 aa5.09□□□□□ -1.6
UBE4A-201ENST00000252108 KIAA2012Q0VF49 1180 aa5.09□□□□□ -1.6
UBE4A-201ENST00000252108 TERF1P54274 439 aa5.08□□□□□ -1.6
UBE4A-201ENST00000252108 RABEP1Q15276 862 aa5.08□□□□□ -1.6
UBE4A-201ENST00000252108 HS1BP3Q53T59 392 aa5.08□□□□□ -1.6
UBE4A-201ENST00000252108 MCM10Q7L590 875 aa5.08□□□□□ -1.6
UBE4A-201ENST00000252108 MEIS3Q99687 375 aa5.08□□□□□ -1.6
UBE4A-201ENST00000252108 GRPEL1Q9HAV7 217 aa5.08□□□□□ -1.6
UBE4A-201ENST00000252108 DISP2A7MBM2 1401 aa5.08□□□□□ -1.6
UBE4A-201ENST00000252108 U2SURPO15042 1029 aaKnown RBP5.08□□□□□ -1.6
UBE4A-201ENST00000252108 HDGFP51858 240 aaKnown RBP5.08□□□□□ -1.6
UBE4A-201ENST00000252108 MAP3K9P80192 1104 aa5.08□□□□□ -1.6
UBE4A-201ENST00000252108 PI4K2BQ8TCG2 481 aa5.08□□□□□ -1.6
UBE4A-201ENST00000252108 USP44Q9H0E7 712 aa5.08□□□□□ -1.6
UBE4A-201ENST00000252108 REC8O95072 547 aa5.08□□□□□ -1.6
UBE4A-201ENST00000252108 MBD3O95983 291 aa5.08□□□□□ -1.6
UBE4A-201ENST00000252108 ESPNB1AK53 854 aa5.08□□□□□ -1.6
UBE4A-201ENST00000252108 TPM3P06753 285 aa5.08□□□□□ -1.6
UBE4A-201ENST00000252108 CUL4AQ13619 759 aa5.08□□□□□ -1.6
UBE4A-201ENST00000252108 AHDC1Q5TGY3 1603 aaPredicted RBP5.08□□□□□ -1.6
UBE4A-201ENST00000252108 COL4A1P02462 1669 aa5.08□□□□□ -1.6
UBE4A-201ENST00000252108 EIF4A1P60842 406 aaKnown RBP5.08□□□□□ -1.6
UBE4A-201ENST00000252108 DLEC1Q9Y238 1755 aa5.07□□□□□ -1.6
UBE4A-201ENST00000252108 CDC45O75419 566 aa5.07□□□□□ -1.6
UBE4A-201ENST00000252108 COL24A1Q17RW2 1714 aa5.07□□□□□ -1.6
UBE4A-201ENST00000252108 TIAM2Q8IVF5 1701 aa5.07□□□□□ -1.6
UBE4A-201ENST00000252108 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.07□□□□□ -1.6
UBE4A-201ENST00000252108 RPAP1Q9BWH6 1393 aaPredicted RBP5.07□□□□□ -1.6
UBE4A-201ENST00000252108 BEND3Q5T5X7 828 aa5.07□□□□□ -1.6
UBE4A-201ENST00000252108 NBPF6Q5VWK0 638 aa5.07□□□□□ -1.6
UBE4A-201ENST00000252108 THEMISQ8N1K5 641 aaPredicted RBP5.07□□□□□ -1.6
UBE4A-201ENST00000252108 NBPF4Q96M43 638 aa5.07□□□□□ -1.6
UBE4A-201ENST00000252108 SLC26A8Q96RN1 970 aa5.07□□□□□ -1.6
UBE4A-201ENST00000252108 CCDC39Q9UFE4 941 aa5.07□□□□□ -1.6
UBE4A-201ENST00000252108 DDX49Q9Y6V7 483 aaKnown RBP5.07□□□□□ -1.6
UBE4A-201ENST00000252108 MYO5AQ9Y4I1 1855 aaKnown RBP5.07□□□□□ -1.6
UBE4A-201ENST00000252108 PDIA4P13667 645 aaKnown RBP5.07□□□□□ -1.6
UBE4A-201ENST00000252108 C16orf71Q8IYS4 520 aaPredicted RBP5.07□□□□□ -1.6
UBE4A-201ENST00000252108 PNMA6EA0A0J9YXQ4 647 aa5.06□□□□□ -1.6
UBE4A-201ENST00000252108 GOLGA6L6A8MZA4 724 aa5.06□□□□□ -1.6
UBE4A-201ENST00000252108 LETM1O95202 739 aaPredicted RBP5.06□□□□□ -1.6
UBE4A-201ENST00000252108 CASP7P55210 303 aa5.06□□□□□ -1.6
UBE4A-201ENST00000252108 ATP6V1DQ9Y5K8 247 aa5.06□□□□□ -1.6
UBE4A-201ENST00000252108 ZNF646O15015 1829 aaPredicted RBP5.06□□□□□ -1.6
UBE4A-201ENST00000252108 NASPP49321 788 aaPredicted RBP5.06□□□□□ -1.6
UBE4A-201ENST00000252108 GZF1Q9H116 711 aaPredicted RBP5.06□□□□□ -1.6
UBE4A-201ENST00000252108 PRM3Q9NNZ6 103 aa5.06□□□□□ -1.6
UBE4A-201ENST00000252108 AXIN2Q9Y2T1 843 aa5.06□□□□□ -1.6
UBE4A-201ENST00000252108 SDSP20132 328 aa5.06□□□□□ -1.6
UBE4A-201ENST00000252108 ZSCAN30Q86W11 494 aa5.06□□□□□ -1.6
UBE4A-201ENST00000252108 TTC14Q96N46 770 aa5.06□□□□□ -1.6
UBE4A-201ENST00000252108 C1orf115Q9H7X2 142 aa5.06□□□□□ -1.6
UBE4A-201ENST00000252108 HDAC5Q9UQL6 1122 aa5.06□□□□□ -1.6
UBE4A-201ENST00000252108 NUP98P52948 1817 aa5.06□□□□□ -1.6
UBE4A-201ENST00000252108 TNS3Q68CZ2 1445 aa5.06□□□□□ -1.6
UBE4A-201ENST00000252108 K7ELQ4 463 aaPredicted RBP5.06□□□□□ -1.6
UBE4A-201ENST00000252108 HMGN5P82970 282 aaKnown RBP5.06□□□□□ -1.6
UBE4A-201ENST00000252108 ATP8B2P98198 1209 aa5.06□□□□□ -1.6
UBE4A-201ENST00000252108 ST3GAL1Q11201 340 aa5.06□□□□□ -1.6
UBE4A-201ENST00000252108 PDCL3Q9H2J4 239 aa5.06□□□□□ -1.6
UBE4A-201ENST00000252108 SCN7AQ01118 1682 aa5.05□□□□□ -1.6
UBE4A-201ENST00000252108 COL5A2P05997 1499 aaPredicted RBP5.05□□□□□ -1.6
UBE4A-201ENST00000252108 GAS2L2Q8NHY3 880 aa5.05□□□□□ -1.6
UBE4A-201ENST00000252108 COL14A1Q05707 1796 aaKnown RBP5.05□□□□□ -1.6
UBE4A-201ENST00000252108 DNTTIP2Q5QJE6 756 aaKnown RBP5.05□□□□□ -1.6
UBE4A-201ENST00000252108 RBM42Q9BTD8 480 aaKnown RBP5.05□□□□□ -1.6
UBE4A-201ENST00000252108 GAS2L3Q86XJ1 694 aa5.05□□□□□ -1.6
UBE4A-201ENST00000252108 ERBB3P21860 1342 aa5.05□□□□□ -1.6
UBE4A-201ENST00000252108 PDE1AP54750 535 aa5.05□□□□□ -1.6
UBE4A-201ENST00000252108 LNPKQ9C0E8 428 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms