RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 SIPA1L3O60292 1781 aaPredicted RBP23.93■■□□□ 1.42
CDC42EP1-201ENST00000249014 OVOS2A0A0G2JMS6 1433 aa23.92■■□□□ 1.42
CDC42EP1-201ENST00000249014 SRGAP3O43295 1099 aa23.92■■□□□ 1.42
CDC42EP1-201ENST00000249014 CLEC17AQ6ZS10 378 aa23.92■■□□□ 1.42
CDC42EP1-201ENST00000249014 PROSER2Q86WR7 435 aaPredicted RBP23.92■■□□□ 1.42
CDC42EP1-201ENST00000249014 NUTM1Q86Y26 1132 aa23.92■■□□□ 1.42
CDC42EP1-201ENST00000249014 CHMP4AQ9BY43 222 aa23.92■■□□□ 1.42
CDC42EP1-201ENST00000249014 C1orf167Q5SNV9 1468 aa23.91■■□□□ 1.42
CDC42EP1-201ENST00000249014 AOX1Q06278 1338 aa23.91■■□□□ 1.42
CDC42EP1-201ENST00000249014 RAB11FIP3O75154 756 aa23.91■■□□□ 1.42
CDC42EP1-201ENST00000249014 DBF4Q9UBU7 674 aaPredicted RBP23.91■■□□□ 1.42
CDC42EP1-201ENST00000249014 KIF1AQ12756 1690 aa23.9■■□□□ 1.42
CDC42EP1-201ENST00000249014 HEG1Q9ULI3 1381 aa23.9■■□□□ 1.42
CDC42EP1-201ENST00000249014 PRAMEF22A3QJZ6 481 aa23.9■■□□□ 1.42
CDC42EP1-201ENST00000249014 GIGYF1O75420 1035 aaPredicted RBP23.9■■□□□ 1.42
CDC42EP1-201ENST00000249014 RHPN1Q8TCX5 695 aa23.9■■□□□ 1.42
CDC42EP1-201ENST00000249014 PROSER3Q2NL68 480 aa23.89■■□□□ 1.42
CDC42EP1-201ENST00000249014 ZGPATQ8N5A5 531 aaKnown RBP23.89■■□□□ 1.41
CDC42EP1-201ENST00000249014 BAG4O95429 457 aaKnown RBP23.88■■□□□ 1.41
CDC42EP1-201ENST00000249014 CYP2E1P05181 493 aaPredicted RBP23.88■■□□□ 1.41
CDC42EP1-201ENST00000249014 PKP1Q13835 747 aa23.88■■□□□ 1.41
CDC42EP1-201ENST00000249014 PALD1Q9ULE6 856 aa23.88■■□□□ 1.41
CDC42EP1-201ENST00000249014 ALS2Q96Q42 1657 aa23.88■■□□□ 1.41
CDC42EP1-201ENST00000249014 ADAMTS7Q9UKP4 1686 aa23.88■■□□□ 1.41
CDC42EP1-201ENST00000249014 IL25Q9H293 177 aa23.87■■□□□ 1.41
CDC42EP1-201ENST00000249014 ANO2Q9NQ90 1003 aa23.87■■□□□ 1.41
CDC42EP1-201ENST00000249014 SKOR2Q2VWA4 1001 aaPredicted RBP23.86■■□□□ 1.41
CDC42EP1-201ENST00000249014 PI4K2BQ8TCG2 481 aa23.86■■□□□ 1.41
CDC42EP1-201ENST00000249014 PANK2Q9BZ23 570 aa23.86■■□□□ 1.41
CDC42EP1-201ENST00000249014 MAP3K2Q9Y2U5 619 aa23.86■■□□□ 1.41
CDC42EP1-201ENST00000249014 ERBB3P21860 1342 aa23.86■■□□□ 1.41
CDC42EP1-201ENST00000249014 NEK4P51957 841 aa23.86■■□□□ 1.41
CDC42EP1-201ENST00000249014 ZC3H6P61129 1189 aaKnown RBP23.86■■□□□ 1.41
CDC42EP1-201ENST00000249014 NUCB2P80303 420 aa23.86■■□□□ 1.41
CDC42EP1-201ENST00000249014 KIF1BPQ96EK5 621 aa23.86■■□□□ 1.41
CDC42EP1-201ENST00000249014 PTMSP20962 102 aa23.85■■□□□ 1.41
CDC42EP1-201ENST00000249014 C19orf44Q9H6X5 657 aa23.85■■□□□ 1.41
CDC42EP1-201ENST00000249014 CWC22Q9HCG8 908 aaKnown RBP23.85■■□□□ 1.41
CDC42EP1-201ENST00000249014 MST1RQ04912 1400 aa23.85■■□□□ 1.41
CDC42EP1-201ENST00000249014 MAP4K4O95819 1239 aaPredicted RBP23.84■■□□□ 1.41
CDC42EP1-201ENST00000249014 KSR2Q6VAB6 950 aa23.83■■□□□ 1.41
CDC42EP1-201ENST00000249014 MCCP23508 829 aa23.82■■□□□ 1.4
CDC42EP1-201ENST00000249014 LMTK3Q96Q04 1460 aa23.82■■□□□ 1.4
CDC42EP1-201ENST00000249014 MRE11P49959 708 aa23.82■■□□□ 1.4
CDC42EP1-201ENST00000249014 MTX1Q13505 466 aa23.82■■□□□ 1.4
CDC42EP1-201ENST00000249014 GOLGA6L22H0YM25 854 aa23.81■■□□□ 1.4
CDC42EP1-201ENST00000249014 ANAPC15P60006 121 aa23.81■■□□□ 1.4
CDC42EP1-201ENST00000249014 CWF19L2Q2TBE0 894 aaKnown RBP23.81■■□□□ 1.4
CDC42EP1-201ENST00000249014 TMX3Q96JJ7 454 aa23.81■■□□□ 1.4
CDC42EP1-201ENST00000249014 ALDH1L1O75891 902 aa23.81■■□□□ 1.4
CDC42EP1-201ENST00000249014 GAS2L3Q86XJ1 694 aa23.81■■□□□ 1.4
CDC42EP1-201ENST00000249014 DDX17Q92841 729 aaKnown RBP23.81■■□□□ 1.4
CDC42EP1-201ENST00000249014 GRPEL1Q9HAV7 217 aa23.81■■□□□ 1.4
CDC42EP1-201ENST00000249014 SCN11AQ9UI33 1791 aa23.8■■□□□ 1.4
CDC42EP1-201ENST00000249014 C9orf78Q9NZ63 289 aaPredicted RBP23.8■■□□□ 1.4
CDC42EP1-201ENST00000249014 ZDHHC9Q9Y397 364 aa23.8■■□□□ 1.4
CDC42EP1-201ENST00000249014 IL17RAQ96F46 866 aa23.79■■□□□ 1.4
CDC42EP1-201ENST00000249014 CRYBG1Q9Y4K1 1723 aa23.79■■□□□ 1.4
CDC42EP1-201ENST00000249014 HSP90AB4PQ58FF6 505 aa23.79■■□□□ 1.4
CDC42EP1-201ENST00000249014 MCTP1Q6DN14 999 aa23.79■■□□□ 1.4
CDC42EP1-201ENST00000249014 HYPKQ9NX55 129 aa23.79■■□□□ 1.4
CDC42EP1-201ENST00000249014 C5P01031 1676 aa23.79■■□□□ 1.4
CDC42EP1-201ENST00000249014 PDIA6Q15084 440 aa23.78■■□□□ 1.4
CDC42EP1-201ENST00000249014 ISY1Q9ULR0 285 aaKnown RBP23.78■■□□□ 1.4
CDC42EP1-201ENST00000249014 KDM6AO15550 1401 aaPredicted RBP23.78■■□□□ 1.4
CDC42EP1-201ENST00000249014 FAM43AQ8N2R8 423 aa23.78■■□□□ 1.4
CDC42EP1-201ENST00000249014 SLC39A6Q13433 755 aa23.77■■□□□ 1.4
CDC42EP1-201ENST00000249014 STRCP1A6NGW2 1772 aa23.77■■□□□ 1.4
CDC42EP1-201ENST00000249014 COL18A1P39060 1754 aa23.77■■□□□ 1.4
CDC42EP1-201ENST00000249014 USP42Q9H9J4 1324 aaKnown RBP23.76■■□□□ 1.39
CDC42EP1-201ENST00000249014 MCM2P49736 904 aa23.76■■□□□ 1.39
CDC42EP1-201ENST00000249014 OS9Q13438 667 aaPredicted RBP23.76■■□□□ 1.39
CDC42EP1-201ENST00000249014 KLHL40Q2TBA0 621 aa23.76■■□□□ 1.39
CDC42EP1-201ENST00000249014 RAPGEF4Q8WZA2 1011 aa23.76■■□□□ 1.39
CDC42EP1-201ENST00000249014 DDX21Q9NR30 783 aaKnown RBP eCLIP23.76■■□□□ 1.39
CDC42EP1-201ENST00000249014 NLRP2Q9NX02 1062 aa23.76■■□□□ 1.39
CDC42EP1-201ENST00000249014 HSPA4P34932 840 aa23.76■■□□□ 1.39
CDC42EP1-201ENST00000249014 ZNF790Q6PG37 636 aa23.76■■□□□ 1.39
CDC42EP1-201ENST00000249014 PA2G4Q9UQ80 394 aaKnown RBP23.76■■□□□ 1.39
CDC42EP1-201ENST00000249014 DDX49Q9Y6V7 483 aaKnown RBP23.76■■□□□ 1.39
CDC42EP1-201ENST00000249014 NPHP3Q7Z494 1330 aa23.75■■□□□ 1.39
CDC42EP1-201ENST00000249014 SGSM2O43147 1006 aa23.75■■□□□ 1.39
CDC42EP1-201ENST00000249014 AIMP1Q12904 312 aaKnown RBP23.75■■□□□ 1.39
CDC42EP1-201ENST00000249014 EPB41L2O43491 1005 aaKnown RBP23.75■■□□□ 1.39
CDC42EP1-201ENST00000249014 CUL4AQ13619 759 aa23.75■■□□□ 1.39
CDC42EP1-201ENST00000249014 CNTROBQ8N137 903 aa23.75■■□□□ 1.39
CDC42EP1-201ENST00000249014 LINS1Q8NG48 757 aa23.75■■□□□ 1.39
CDC42EP1-201ENST00000249014 KAZALD1Q96I82 304 aa23.75■■□□□ 1.39
CDC42EP1-201ENST00000249014 UPF3BQ9BZI7 483 aaKnown RBP23.75■■□□□ 1.39
CDC42EP1-201ENST00000249014 MEGF6O75095 1541 aa23.75■■□□□ 1.39
CDC42EP1-201ENST00000249014 SLC52A2Q9HAB3 445 aa23.74■■□□□ 1.39
CDC42EP1-201ENST00000249014 LMBRD1Q9NUN5 540 aa23.74■■□□□ 1.39
CDC42EP1-201ENST00000249014 TMEM94Q12767 1356 aa23.74■■□□□ 1.39
CDC42EP1-201ENST00000249014 TTC41PQ6P2S7 1318 aa23.74■■□□□ 1.39
CDC42EP1-201ENST00000249014 ATF3P18847 181 aa23.74■■□□□ 1.39
CDC42EP1-201ENST00000249014 NOL8Q76FK4 1167 aaKnown RBP23.74■■□□□ 1.39
CDC42EP1-201ENST00000249014 GRM8O00222 908 aa23.73■■□□□ 1.39
CDC42EP1-201ENST00000249014 PHKG2P15735 406 aa23.73■■□□□ 1.39
CDC42EP1-201ENST00000249014 NFATC2IPQ8NCF5 419 aa23.73■■□□□ 1.39
CDC42EP1-201ENST00000249014 SUCLG2Q96I99 432 aa23.73■■□□□ 1.39
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