RNA–Protein interactions for RNA: ENST00000248566.3

SEM1-201, Transcript of SEM1, 26S proteasome complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEM1, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEM1-201ENST00000248566 COL24A1Q17RW2 1714 aa16.81■□□□□ 0.28
SEM1-201ENST00000248566 GPR162Q16538 588 aa16.81■□□□□ 0.28
SEM1-201ENST00000248566 NLGN2Q8NFZ4 835 aa16.81■□□□□ 0.28
SEM1-201ENST00000248566 RTF1Q92541 710 aaKnown RBP16.81■□□□□ 0.28
SEM1-201ENST00000248566 MRC1P22897 1456 aa16.81■□□□□ 0.28
SEM1-201ENST00000248566 RPS6KA4O75676 772 aa16.8■□□□□ 0.28
SEM1-201ENST00000248566 RALBP1Q15311 655 aa16.8■□□□□ 0.28
SEM1-201ENST00000248566 ARHGEF1Q92888 912 aaKnown RBP16.8■□□□□ 0.28
SEM1-201ENST00000248566 TJP1Q07157 1748 aa16.8■□□□□ 0.28
SEM1-201ENST00000248566 ADAMTS7Q9UKP4 1686 aa16.79■□□□□ 0.28
SEM1-201ENST00000248566 YY1P25490 414 aa16.78■□□□□ 0.28
SEM1-201ENST00000248566 MCM10Q7L590 875 aa16.78■□□□□ 0.28
SEM1-201ENST00000248566 BTBD11A6QL63 1104 aa16.77■□□□□ 0.28
SEM1-201ENST00000248566 DCTN1Q14203 1278 aa16.77■□□□□ 0.28
SEM1-201ENST00000248566 CCDC87Q9NVE4 849 aa16.77■□□□□ 0.28
SEM1-201ENST00000248566 KCPQ6ZWJ8 1503 aa16.77■□□□□ 0.27
SEM1-201ENST00000248566 MMP10P09238 476 aa16.76■□□□□ 0.27
SEM1-201ENST00000248566 INTS5Q6P9B9 1019 aaKnown RBP16.76■□□□□ 0.27
SEM1-201ENST00000248566 ZNF790Q6PG37 636 aa16.76■□□□□ 0.27
SEM1-201ENST00000248566 MYH14Q7Z406 1995 aaKnown RBP16.76■□□□□ 0.27
SEM1-201ENST00000248566 MAPK8IP3Q9UPT6 1336 aa16.76■□□□□ 0.27
SEM1-201ENST00000248566 CYP19A1P11511 503 aaPredicted RBP16.75■□□□□ 0.27
SEM1-201ENST00000248566 NLGN1Q8N2Q7 840 aa16.75■□□□□ 0.27
SEM1-201ENST00000248566 ZNF496Q96IT1 587 aaPredicted RBP16.75■□□□□ 0.27
SEM1-201ENST00000248566 SRP68Q9UHB9 627 aaKnown RBP16.75■□□□□ 0.27
SEM1-201ENST00000248566 CANXP27824 592 aaKnown RBP16.74■□□□□ 0.27
SEM1-201ENST00000248566 PNNQ9H307 717 aaKnown RBP16.74■□□□□ 0.27
SEM1-201ENST00000248566 WWC3Q9ULE0 1092 aa16.74■□□□□ 0.27
SEM1-201ENST00000248566 CD2APQ9Y5K6 639 aa16.74■□□□□ 0.27
SEM1-201ENST00000248566 MYBBP1AQ9BQG0 1328 aaKnown RBP16.74■□□□□ 0.27
SEM1-201ENST00000248566 KCNQ3O43525 872 aa16.73■□□□□ 0.27
SEM1-201ENST00000248566 ZPR1O75312 459 aa16.73■□□□□ 0.27
SEM1-201ENST00000248566 STARD3NLO95772 234 aa16.73■□□□□ 0.27
SEM1-201ENST00000248566 GYS1P13807 737 aa16.73■□□□□ 0.27
SEM1-201ENST00000248566 VSIG10Q8N0Z9 540 aa16.73■□□□□ 0.27
SEM1-201ENST00000248566 FMNL2Q96PY5 1086 aa16.73■□□□□ 0.27
SEM1-201ENST00000248566 ZNF330Q9Y3S2 320 aaPredicted RBP16.73■□□□□ 0.27
SEM1-201ENST00000248566 CEMIPQ8WUJ3 1361 aa16.73■□□□□ 0.27
SEM1-201ENST00000248566 C4AP0C0L4 1744 aa16.73■□□□□ 0.27
SEM1-201ENST00000248566 SIPA1L3O60292 1781 aaPredicted RBP16.73■□□□□ 0.27
SEM1-201ENST00000248566 ZBTB1Q9Y2K1 713 aa16.72■□□□□ 0.27
SEM1-201ENST00000248566 PARP3Q9Y6F1 533 aa16.72■□□□□ 0.27
SEM1-201ENST00000248566 CICQ96RK0 1608 aaPredicted RBP16.72■□□□□ 0.27
SEM1-201ENST00000248566 HEG1Q9ULI3 1381 aa16.72■□□□□ 0.27
SEM1-201ENST00000248566 UBR2Q8IWV8 1755 aa16.72■□□□□ 0.27
SEM1-201ENST00000248566 HTATSF1O43719 755 aaKnown RBP16.7■□□□□ 0.26
SEM1-201ENST00000248566 USPL1Q5W0Q7 1092 aa16.7■□□□□ 0.26
SEM1-201ENST00000248566 NPM2Q86SE8 214 aaKnown RBP16.7■□□□□ 0.26
SEM1-201ENST00000248566 PLEKHF1Q96S99 279 aa16.7■□□□□ 0.26
SEM1-201ENST00000248566 TEX13AQ9BXU3 409 aaPredicted RBP16.7■□□□□ 0.26
SEM1-201ENST00000248566 SOS1Q07889 1333 aaPredicted RBP16.7■□□□□ 0.26
SEM1-201ENST00000248566 USP42Q9H9J4 1324 aaKnown RBP16.7■□□□□ 0.26
SEM1-201ENST00000248566 COL15A1P39059 1388 aa16.7■□□□□ 0.26
SEM1-201ENST00000248566 FKBP8Q14318 412 aa16.7■□□□□ 0.26
SEM1-201ENST00000248566 WDR43Q15061 677 aaKnown RBP eCLIP16.7■□□□□ 0.26
SEM1-201ENST00000248566 NFE2L2Q16236 605 aa16.7■□□□□ 0.26
SEM1-201ENST00000248566 CHADLQ6NUI6 762 aa16.7■□□□□ 0.26
SEM1-201ENST00000248566 MIS18AQ9NYP9 233 aa16.7■□□□□ 0.26
SEM1-201ENST00000248566 YBX3P16989 372 aaKnown RBP eCLIP16.69■□□□□ 0.26
SEM1-201ENST00000248566 TAF7Q15545 349 aaPredicted RBP16.69■□□□□ 0.26
SEM1-201ENST00000248566 CCDC146Q8IYE0 955 aa16.69■□□□□ 0.26
SEM1-201ENST00000248566 DLG5Q8TDM6 1919 aa16.69■□□□□ 0.26
SEM1-201ENST00000248566 THUMPD2Q9BTF0 503 aaKnown RBP16.69■□□□□ 0.26
SEM1-201ENST00000248566 PRKRIP1Q9H875 184 aaPredicted RBP16.68■□□□□ 0.26
SEM1-201ENST00000248566 GABBR2O75899 941 aa16.67■□□□□ 0.26
SEM1-201ENST00000248566 A1BGP04217 495 aa16.67■□□□□ 0.26
SEM1-201ENST00000248566 NEUROD2Q15784 382 aa16.67■□□□□ 0.26
SEM1-201ENST00000248566 NARFQ9UHQ1 456 aa16.67■□□□□ 0.26
SEM1-201ENST00000248566 PRAMEF22A3QJZ6 481 aa16.66■□□□□ 0.26
SEM1-201ENST00000248566 GRIN3BO60391 1043 aa16.66■□□□□ 0.26
SEM1-201ENST00000248566 PRR29P0C7W0 189 aa16.66■□□□□ 0.26
SEM1-201ENST00000248566 PIP4K2AP48426 406 aaPredicted RBP16.66■□□□□ 0.26
SEM1-201ENST00000248566 RIPK4P57078 832 aa16.66■□□□□ 0.26
SEM1-201ENST00000248566 A0A087WZG4 1122 aa16.65■□□□□ 0.26
SEM1-201ENST00000248566 A0A0G2JLW4 131 aa16.65■□□□□ 0.26
SEM1-201ENST00000248566 SNRPA1P09661 255 aaKnown RBP16.65■□□□□ 0.26
SEM1-201ENST00000248566 BICDL1Q6ZP65 573 aa16.65■□□□□ 0.26
SEM1-201ENST00000248566 TBC1D2BQ9UPU7 963 aa16.65■□□□□ 0.26
SEM1-201ENST00000248566 RRP7AQ9Y3A4 280 aaKnown RBP16.65■□□□□ 0.26
SEM1-201ENST00000248566 USP16Q9Y5T5 823 aa16.65■□□□□ 0.26
SEM1-201ENST00000248566 EIF5P55010 431 aaKnown RBP16.64■□□□□ 0.25
SEM1-201ENST00000248566 DDR1Q08345 913 aa16.64■□□□□ 0.25
SEM1-201ENST00000248566 PNISRQ8TF01 805 aaKnown RBP16.64■□□□□ 0.25
SEM1-201ENST00000248566 CHD4Q14839 1912 aa16.63■□□□□ 0.25
SEM1-201ENST00000248566 ZNF316A6NFI3 1004 aaPredicted RBP16.63■□□□□ 0.25
SEM1-201ENST00000248566 N4BP2Q86UW6 1770 aaPredicted RBP16.62■□□□□ 0.25
SEM1-201ENST00000248566 POLRMTO00411 1230 aaKnown RBP16.62■□□□□ 0.25
SEM1-201ENST00000248566 TM4SF1P30408 202 aa16.62■□□□□ 0.25
SEM1-201ENST00000248566 IL6STP40189 918 aaPredicted RBP16.62■□□□□ 0.25
SEM1-201ENST00000248566 TMPOP42166 694 aaKnown RBP16.62■□□□□ 0.25
SEM1-201ENST00000248566 TGFB2P61812 414 aa16.62■□□□□ 0.25
SEM1-201ENST00000248566 NFIXQ14938 502 aa16.62■□□□□ 0.25
SEM1-201ENST00000248566 ADAMTS8Q9UP79 889 aa16.62■□□□□ 0.25
SEM1-201ENST00000248566 C10orf71Q711Q0 1435 aa16.62■□□□□ 0.25
SEM1-201ENST00000248566 DPEP1P16444 411 aa16.61■□□□□ 0.25
SEM1-201ENST00000248566 RUNDC1Q96C34 613 aa16.61■□□□□ 0.25
SEM1-201ENST00000248566 BCS1LQ9Y276 419 aa16.61■□□□□ 0.25
SEM1-201ENST00000248566 PXDNLA1KZ92 1463 aa16.6■□□□□ 0.25
SEM1-201ENST00000248566 LMOD3Q0VAK6 560 aa16.6■□□□□ 0.25
SEM1-201ENST00000248566 DZIP3Q86Y13 1208 aaKnown RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms