RNA–Protein interactions for RNA: ENST00000248550.7

PHTF2-201, Transcript of putative homeodomain transcription factor 2, humanhuman

TSL 1 (best) BASIC

Gene PHTF2, Length 4,778 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2-201ENST00000248550 CTU1Q7Z7A3 348 aaKnown RBP4.49□□□□□ -1.69
PHTF2-201ENST00000248550 SYT17Q9BSW7 474 aa4.49□□□□□ -1.69
PHTF2-201ENST00000248550 BSDC1Q9NW68 430 aaPredicted RBP4.49□□□□□ -1.69
PHTF2-201ENST00000248550 MKRN1Q9UHC7 482 aaKnown RBP4.49□□□□□ -1.69
PHTF2-201ENST00000248550 FMN2Q9NZ56 1722 aa4.49□□□□□ -1.69
PHTF2-201ENST00000248550 SPATA31A3Q5VYP0 1347 aa4.49□□□□□ -1.69
PHTF2-201ENST00000248550 CENPJQ9HC77 1338 aaPredicted RBP4.49□□□□□ -1.69
PHTF2-201ENST00000248550 C6orf229H3BNL8 230 aa4.49□□□□□ -1.69
PHTF2-201ENST00000248550 IREB2P48200 963 aaKnown RBP4.49□□□□□ -1.69
PHTF2-201ENST00000248550 INHBEP58166 350 aa4.49□□□□□ -1.69
PHTF2-201ENST00000248550 CNBD1Q8NA66 436 aa4.49□□□□□ -1.69
PHTF2-201ENST00000248550 NUDT16Q96DE0 195 aaKnown RBP4.49□□□□□ -1.69
PHTF2-201ENST00000248550 MYH16Q9H6N6 1097 aa4.49□□□□□ -1.69
PHTF2-201ENST00000248550 CCDC129Q6ZRS4 1044 aa4.48□□□□□ -1.69
PHTF2-201ENST00000248550 PPARGC1BQ86YN6 1023 aaKnown RBP4.48□□□□□ -1.69
PHTF2-201ENST00000248550 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.48□□□□□ -1.69
PHTF2-201ENST00000248550 RAET1EQ8TD07 263 aa4.48□□□□□ -1.69
PHTF2-201ENST00000248550 PRAM1Q96QH2 718 aa4.48□□□□□ -1.69
PHTF2-201ENST00000248550 ZFYVE28Q9HCC9 887 aa4.48□□□□□ -1.69
PHTF2-201ENST00000248550 YTHDC2Q9H6S0 1430 aaKnown RBP4.48□□□□□ -1.69
PHTF2-201ENST00000248550 USP32Q8NFA0 1604 aa4.48□□□□□ -1.69
PHTF2-201ENST00000248550 ZC3H12CQ9C0D7 883 aaKnown RBP4.48□□□□□ -1.69
PHTF2-201ENST00000248550 NALCNQ8IZF0 1738 aa4.48□□□□□ -1.69
PHTF2-201ENST00000248550 RGS12O14924 1447 aa4.48□□□□□ -1.69
PHTF2-201ENST00000248550 PPIP5K1Q6PFW1 1433 aa4.48□□□□□ -1.69
PHTF2-201ENST00000248550 TLR3O15455 904 aaKnown RBP4.48□□□□□ -1.69
PHTF2-201ENST00000248550 FKTNO75072 461 aa4.48□□□□□ -1.69
PHTF2-201ENST00000248550 COA7Q96BR5 231 aa4.48□□□□□ -1.69
PHTF2-201ENST00000248550 SLC10A4Q96EP9 437 aa4.48□□□□□ -1.69
PHTF2-201ENST00000248550 CARD11Q9BXL7 1154 aa4.48□□□□□ -1.69
PHTF2-201ENST00000248550 ROCK2O75116 1388 aaKnown RBP4.48□□□□□ -1.69
PHTF2-201ENST00000248550 CPDO75976 1380 aa4.48□□□□□ -1.69
PHTF2-201ENST00000248550 KIF24Q5T7B8 1368 aa4.48□□□□□ -1.69
PHTF2-201ENST00000248550 SLIT2O94813 1529 aa4.48□□□□□ -1.69
PHTF2-201ENST00000248550 ZEB2O60315 1214 aa4.48□□□□□ -1.69
PHTF2-201ENST00000248550 MAP2K2P36507 400 aa4.48□□□□□ -1.69
PHTF2-201ENST00000248550 CHRNA2Q15822 529 aa4.48□□□□□ -1.69
PHTF2-201ENST00000248550 NOM1Q5C9Z4 860 aaKnown RBP4.48□□□□□ -1.69
PHTF2-201ENST00000248550 NLRP3Q96P20 1036 aa4.48□□□□□ -1.69
PHTF2-201ENST00000248550 UPF3BQ9BZI7 483 aaKnown RBP4.48□□□□□ -1.69
PHTF2-201ENST00000248550 RRAGCQ9HB90 399 aa4.48□□□□□ -1.69
PHTF2-201ENST00000248550 CCNA1P78396 465 aa4.47□□□□□ -1.69
PHTF2-201ENST00000248550 HELBQ8NG08 1087 aaPredicted RBP4.47□□□□□ -1.69
PHTF2-201ENST00000248550 EXOC4Q96A65 974 aa4.47□□□□□ -1.69
PHTF2-201ENST00000248550 C14orf93Q9H972 538 aaKnown RBP4.47□□□□□ -1.69
PHTF2-201ENST00000248550 ST20-MTHFSA0A0A6YYL1 179 aa4.47□□□□□ -1.69
PHTF2-201ENST00000248550 MTHFSP49914 203 aa4.47□□□□□ -1.69
PHTF2-201ENST00000248550 DMWDQ09019 674 aa4.47□□□□□ -1.69
PHTF2-201ENST00000248550 NEUROD1Q13562 356 aa4.47□□□□□ -1.69
PHTF2-201ENST00000248550 POLR3AO14802 1390 aaPredicted RBP4.47□□□□□ -1.69
PHTF2-201ENST00000248550 IGSF1Q8N6C5 1336 aa4.47□□□□□ -1.69
PHTF2-201ENST00000248550 ONECUT3O60422 494 aaPredicted RBP4.47□□□□□ -1.69
PHTF2-201ENST00000248550 MYCNP04198 464 aaPredicted RBP4.47□□□□□ -1.69
PHTF2-201ENST00000248550 ZNF157P51786 506 aaPredicted RBP4.47□□□□□ -1.69
PHTF2-201ENST00000248550 CDC37L1Q7L3B6 337 aa4.47□□□□□ -1.69
PHTF2-201ENST00000248550 TRIM47Q96LD4 638 aa4.47□□□□□ -1.69
PHTF2-201ENST00000248550 CARD10Q9BWT7 1032 aa4.47□□□□□ -1.69
PHTF2-201ENST00000248550 PPLO60437 1756 aa4.47□□□□□ -1.69
PHTF2-201ENST00000248550 PXDNQ92626 1479 aa4.47□□□□□ -1.69
PHTF2-201ENST00000248550 MPHOSPH10O00566 681 aaKnown RBP4.46□□□□□ -1.69
PHTF2-201ENST00000248550 IGHMBP2P38935 993 aaKnown RBP4.46□□□□□ -1.69
PHTF2-201ENST00000248550 WDR78Q5VTH9 848 aa4.46□□□□□ -1.69
PHTF2-201ENST00000248550 POTEHQ6S545 545 aa4.46□□□□□ -1.69
PHTF2-201ENST00000248550 PNMA3Q9UL41 463 aa4.46□□□□□ -1.69
PHTF2-201ENST00000248550 ZNF530Q6P9A1 599 aaPredicted RBP4.46□□□□□ -1.7
PHTF2-201ENST00000248550 TRMT44Q8IYL2 757 aaKnown RBP4.46□□□□□ -1.7
PHTF2-201ENST00000248550 U2SURPO15042 1029 aaKnown RBP4.46□□□□□ -1.7
PHTF2-201ENST00000248550 PPP4R3BQ5MIZ7 849 aa4.46□□□□□ -1.7
PHTF2-201ENST00000248550 GPR101Q96P66 508 aaPredicted RBP4.46□□□□□ -1.7
PHTF2-201ENST00000248550 PRRX2Q99811 253 aa4.46□□□□□ -1.7
PHTF2-201ENST00000248550 HINFPQ9BQA5 517 aa4.46□□□□□ -1.7
PHTF2-201ENST00000248550 RAB23Q9ULC3 237 aa4.46□□□□□ -1.7
PHTF2-201ENST00000248550 XIRP1Q702N8 1843 aaKnown RBP4.46□□□□□ -1.7
PHTF2-201ENST00000248550 SDHBP21912 280 aa4.46□□□□□ -1.7
PHTF2-201ENST00000248550 PICK1Q9NRD5 415 aa4.46□□□□□ -1.7
PHTF2-201ENST00000248550 MSRAQ9UJ68 235 aa4.46□□□□□ -1.7
PHTF2-201ENST00000248550 PPIP5K2O43314 1243 aa4.45□□□□□ -1.7
PHTF2-201ENST00000248550 RAD21O60216 631 aa4.45□□□□□ -1.7
PHTF2-201ENST00000248550 HUNKP57058 714 aa4.45□□□□□ -1.7
PHTF2-201ENST00000248550 MSL1Q68DK7 614 aa4.45□□□□□ -1.7
PHTF2-201ENST00000248550 UIMC1Q96RL1 719 aa4.45□□□□□ -1.7
PHTF2-201ENST00000248550 CDC5LQ99459 802 aaKnown RBP4.45□□□□□ -1.7
PHTF2-201ENST00000248550 CHMP3Q9Y3E7 222 aa4.45□□□□□ -1.7
PHTF2-201ENST00000248550 STRCP1A6NGW2 1772 aa4.45□□□□□ -1.7
PHTF2-201ENST00000248550 MAST3O60307 1309 aa4.45□□□□□ -1.7
PHTF2-201ENST00000248550 RGL2O15211 777 aa4.45□□□□□ -1.7
PHTF2-201ENST00000248550 ACTN1P12814 892 aa4.45□□□□□ -1.7
PHTF2-201ENST00000248550 OS9Q13438 667 aaPredicted RBP4.45□□□□□ -1.7
PHTF2-201ENST00000248550 NONOQ15233 471 aaKnown RBP eCLIP4.45□□□□□ -1.7
PHTF2-201ENST00000248550 USP48Q86UV5 1035 aa4.45□□□□□ -1.7
PHTF2-201ENST00000248550 TNPO1Q92973 898 aaKnown RBP4.45□□□□□ -1.7
PHTF2-201ENST00000248550 CREBZFQ9NS37 354 aa4.45□□□□□ -1.7
PHTF2-201ENST00000248550 JAG2Q9Y219 1238 aa4.45□□□□□ -1.7
PHTF2-201ENST00000248550 NOD1Q9Y239 953 aa4.45□□□□□ -1.7
PHTF2-201ENST00000248550 TFRCP02786 760 aaKnown RBP4.45□□□□□ -1.7
PHTF2-201ENST00000248550 CDK11BP21127 795 aaKnown RBP4.45□□□□□ -1.7
PHTF2-201ENST00000248550 CIAPIN1Q6FI81 312 aa4.45□□□□□ -1.7
PHTF2-201ENST00000248550 SAMD7Q7Z3H4 446 aa4.45□□□□□ -1.7
PHTF2-201ENST00000248550 ANKRD24Q8TF21 1146 aa4.45□□□□□ -1.7
PHTF2-201ENST00000248550 CHAMP1Q96JM3 812 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms