RNA–Protein interactions for RNA: ENST00000244020.4

SRSF6-201, Transcript of serine and arginine rich splicing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF6, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF6-201ENST00000244020 CKAP2LQ8IYA6 745 aa11□□□□□ -0.65
SRSF6-201ENST00000244020 GPATCH11Q8N954 259 aa11□□□□□ -0.65
SRSF6-201ENST00000244020 NUP62CLQ9H1M0 184 aa11□□□□□ -0.65
SRSF6-201ENST00000244020 GJB2P29033 226 aa11□□□□□ -0.65
SRSF6-201ENST00000244020 FERMT3Q86UX7 667 aa11□□□□□ -0.65
SRSF6-201ENST00000244020 ATP10DQ9P241 1426 aa11□□□□□ -0.65
SRSF6-201ENST00000244020 RGS12O14924 1447 aa11□□□□□ -0.65
SRSF6-201ENST00000244020 TNMDQ9H2S6 317 aa11□□□□□ -0.65
SRSF6-201ENST00000244020 OGFRQ9NZT2 677 aa11□□□□□ -0.65
SRSF6-201ENST00000244020 YTHDC2Q9H6S0 1430 aaKnown RBP11□□□□□ -0.65
SRSF6-201ENST00000244020 UNC5CLQ8IV45 518 aa11□□□□□ -0.65
SRSF6-201ENST00000244020 IPO4Q8TEX9 1081 aaKnown RBP11□□□□□ -0.65
SRSF6-201ENST00000244020 CPA1P15085 419 aa10.99□□□□□ -0.65
SRSF6-201ENST00000244020 LUZP1Q86V48 1076 aa10.99□□□□□ -0.65
SRSF6-201ENST00000244020 SPG7Q9UQ90 795 aa10.99□□□□□ -0.65
SRSF6-201ENST00000244020 VWDEQ8N2E2 1590 aa10.99□□□□□ -0.65
SRSF6-201ENST00000244020 DDX54Q8TDD1 881 aaKnown RBP10.99□□□□□ -0.65
SRSF6-201ENST00000244020 ZCCHC11Q5TAX3 1644 aaKnown RBP10.99□□□□□ -0.65
SRSF6-201ENST00000244020 PNMA6EA0A0J9YXQ4 647 aa10.99□□□□□ -0.65
SRSF6-201ENST00000244020 CHL1O00533 1208 aa10.99□□□□□ -0.65
SRSF6-201ENST00000244020 UBTFL1P0CB47 393 aaPredicted RBP10.99□□□□□ -0.65
SRSF6-201ENST00000244020 KRT85P78386 507 aa10.99□□□□□ -0.65
SRSF6-201ENST00000244020 TAF3Q5VWG9 929 aa10.99□□□□□ -0.65
SRSF6-201ENST00000244020 LARP1BQ659C4 914 aaKnown RBP10.99□□□□□ -0.65
SRSF6-201ENST00000244020 CNTROBQ8N137 903 aa10.99□□□□□ -0.65
SRSF6-201ENST00000244020 FAM200AQ8TCP9 573 aa10.99□□□□□ -0.65
SRSF6-201ENST00000244020 SLC52A1Q9NWF4 448 aa10.99□□□□□ -0.65
SRSF6-201ENST00000244020 LRRFIP2Q9Y608 721 aaKnown RBP10.99□□□□□ -0.65
SRSF6-201ENST00000244020 HSPA4P34932 840 aa10.98□□□□□ -0.65
SRSF6-201ENST00000244020 HOMER1Q86YM7 354 aa10.98□□□□□ -0.65
SRSF6-201ENST00000244020 KCNF1Q9H3M0 494 aa10.98□□□□□ -0.65
SRSF6-201ENST00000244020 PPRC1Q5VV67 1664 aaKnown RBP10.98□□□□□ -0.65
SRSF6-201ENST00000244020 H0YHG0 523 aa10.98□□□□□ -0.65
SRSF6-201ENST00000244020 JAKMIP1Q96N16 626 aaKnown RBP10.98□□□□□ -0.65
SRSF6-201ENST00000244020 PDRG1Q9NUG6 133 aa10.98□□□□□ -0.65
SRSF6-201ENST00000244020 GOLGA6L19H0YKK7 550 aa10.98□□□□□ -0.65
SRSF6-201ENST00000244020 TMEM87AQ8NBN3 555 aa10.98□□□□□ -0.65
SRSF6-201ENST00000244020 BICD2Q8TD16 824 aa10.98□□□□□ -0.65
SRSF6-201ENST00000244020 IBSPP21815 317 aaPredicted RBP10.98□□□□□ -0.65
SRSF6-201ENST00000244020 LRMPQ12912 555 aa10.98□□□□□ -0.65
SRSF6-201ENST00000244020 CREBRFQ8IUR6 639 aa10.97□□□□□ -0.65
SRSF6-201ENST00000244020 SNX14Q9Y5W7 946 aa10.97□□□□□ -0.65
SRSF6-201ENST00000244020 ZKSCAN1P17029 563 aaPredicted RBP10.97□□□□□ -0.65
SRSF6-201ENST00000244020 ATP8B2P98198 1209 aa10.97□□□□□ -0.65
SRSF6-201ENST00000244020 CYP46A1Q9Y6A2 500 aa10.97□□□□□ -0.65
SRSF6-201ENST00000244020 SMTNL1A8MU46 457 aa10.97□□□□□ -0.65
SRSF6-201ENST00000244020 TYRO3Q06418 890 aa10.97□□□□□ -0.65
SRSF6-201ENST00000244020 ANO6Q4KMQ2 910 aa10.96□□□□□ -0.65
SRSF6-201ENST00000244020 RUFY2Q8WXA3 655 aa10.96□□□□□ -0.65
SRSF6-201ENST00000244020 PAXBP1Q9Y5B6 917 aa10.96□□□□□ -0.65
SRSF6-201ENST00000244020 NECAB1Q8N987 351 aa10.96□□□□□ -0.65
SRSF6-201ENST00000244020 PLCD4Q9BRC7 762 aa10.96□□□□□ -0.65
SRSF6-201ENST00000244020 CLIP2Q9UDT6 1046 aa10.96□□□□□ -0.65
SRSF6-201ENST00000244020 INO80Q9ULG1 1556 aaPredicted RBP10.96□□□□□ -0.66
SRSF6-201ENST00000244020 RUFY3Q7L099 469 aa10.96□□□□□ -0.66
SRSF6-201ENST00000244020 TFIP11Q9UBB9 837 aaKnown RBP10.96□□□□□ -0.66
SRSF6-201ENST00000244020 NUTM2FA1L443 756 aa10.95□□□□□ -0.66
SRSF6-201ENST00000244020 AP5Z1O43299 807 aa10.95□□□□□ -0.66
SRSF6-201ENST00000244020 CCDC30Q5VVM6 783 aa10.95□□□□□ -0.66
SRSF6-201ENST00000244020 PRPF40BQ6NWY9 871 aaKnown RBP10.95□□□□□ -0.66
SRSF6-201ENST00000244020 ANKRD7Q92527 254 aa10.95□□□□□ -0.66
SRSF6-201ENST00000244020 BECN2A8MW95 431 aa10.95□□□□□ -0.66
SRSF6-201ENST00000244020 NCBP1Q09161 790 aaKnown RBP10.95□□□□□ -0.66
SRSF6-201ENST00000244020 FLIIQ13045 1269 aa10.95□□□□□ -0.66
SRSF6-201ENST00000244020 SPATA32Q96LK8 384 aa10.95□□□□□ -0.66
SRSF6-201ENST00000244020 DACT1Q9NYF0 836 aa10.95□□□□□ -0.66
SRSF6-201ENST00000244020 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.95□□□□□ -0.66
SRSF6-201ENST00000244020 V9GYY5 206 aaPredicted RBP10.95□□□□□ -0.66
SRSF6-201ENST00000244020 IFT172Q9UG01 1749 aa10.95□□□□□ -0.66
SRSF6-201ENST00000244020 SSH2Q76I76 1423 aa10.95□□□□□ -0.66
SRSF6-201ENST00000244020 FAM173BQ6P4H8 233 aa10.95□□□□□ -0.66
SRSF6-201ENST00000244020 RASEFQ8IZ41 740 aa10.95□□□□□ -0.66
SRSF6-201ENST00000244020 ZSCAN31Q96LW9 406 aaPredicted RBP10.95□□□□□ -0.66
SRSF6-201ENST00000244020 NRBP1Q9UHY1 535 aa10.95□□□□□ -0.66
SRSF6-201ENST00000244020 ZC3H13Q5T200 1668 aaKnown RBP10.95□□□□□ -0.66
SRSF6-201ENST00000244020 CEP135Q66GS9 1140 aa10.95□□□□□ -0.66
SRSF6-201ENST00000244020 ARHGEF40Q8TER5 1519 aa10.95□□□□□ -0.66
SRSF6-201ENST00000244020 RPAP1Q9BWH6 1393 aaPredicted RBP10.95□□□□□ -0.66
SRSF6-201ENST00000244020 RAPGEF3O95398 923 aa10.94□□□□□ -0.66
SRSF6-201ENST00000244020 ZNF165P49910 485 aa10.94□□□□□ -0.66
SRSF6-201ENST00000244020 EIF4A2Q14240 407 aaKnown RBP10.94□□□□□ -0.66
SRSF6-201ENST00000244020 NAA30Q147X3 362 aaPredicted RBP10.94□□□□□ -0.66
SRSF6-201ENST00000244020 GORABQ5T7V8 394 aa10.94□□□□□ -0.66
SRSF6-201ENST00000244020 RAD50Q92878 1312 aa10.94□□□□□ -0.66
SRSF6-201ENST00000244020 SRGAP3O43295 1099 aa10.94□□□□□ -0.66
SRSF6-201ENST00000244020 IL25Q9H293 177 aa10.94□□□□□ -0.66
SRSF6-201ENST00000244020 SGSM2O43147 1006 aa10.94□□□□□ -0.66
SRSF6-201ENST00000244020 PDCP20941 246 aa10.94□□□□□ -0.66
SRSF6-201ENST00000244020 SH2B1Q9NRF2 756 aaPredicted RBP10.94□□□□□ -0.66
SRSF6-201ENST00000244020 CWC15Q9P013 229 aaKnown RBP10.94□□□□□ -0.66
SRSF6-201ENST00000244020 MTMR6Q9Y217 621 aa10.94□□□□□ -0.66
SRSF6-201ENST00000244020 PPLO60437 1756 aa10.94□□□□□ -0.66
SRSF6-201ENST00000244020 CTIFO43310 598 aaKnown RBP10.93□□□□□ -0.66
SRSF6-201ENST00000244020 PTPN14Q15678 1187 aa10.93□□□□□ -0.66
SRSF6-201ENST00000244020 FILIP1Q7Z7B0 1213 aa10.93□□□□□ -0.66
SRSF6-201ENST00000244020 CBX8Q9HC52 389 aa10.93□□□□□ -0.66
SRSF6-201ENST00000244020 CAMSAP1Q5T5Y3 1602 aa10.93□□□□□ -0.66
SRSF6-201ENST00000244020 ABCC3O15438 1527 aa10.93□□□□□ -0.66
SRSF6-201ENST00000244020 NCKAP5LQ9HCH0 1330 aa10.93□□□□□ -0.66
SRSF6-201ENST00000244020 FOXO3O43524 673 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms