RNA–Protein interactions for RNA: ENST00000233072.9

CPS1-201, Transcript of carbamoyl-phosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPS1, Length 5,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-201ENST00000233072 ANKRD18BA2A2Z9 1011 aa8.4□□□□□ -1.07
CPS1-201ENST00000233072 BAG4O95429 457 aaKnown RBP8.4□□□□□ -1.07
CPS1-201ENST00000233072 MAP4K4O95819 1239 aaPredicted RBP8.4□□□□□ -1.07
CPS1-201ENST00000233072 ZSCAN29Q8IWY8 852 aaPredicted RBP8.4□□□□□ -1.07
CPS1-201ENST00000233072 CTCFLQ8NI51 663 aaPredicted RBP8.4□□□□□ -1.07
CPS1-201ENST00000233072 TMEM57Q8N5G2 664 aa8.39□□□□□ -1.07
CPS1-201ENST00000233072 DDX11Q96FC9 970 aa8.39□□□□□ -1.07
CPS1-201ENST00000233072 MPHOSPH6Q99547 160 aaKnown RBP8.39□□□□□ -1.07
CPS1-201ENST00000233072 KIF21AQ7Z4S6 1674 aa8.39□□□□□ -1.07
CPS1-201ENST00000233072 GOLGA6L9A6NEM1 432 aa8.39□□□□□ -1.07
CPS1-201ENST00000233072 POLR3DP05423 398 aaPredicted RBP8.39□□□□□ -1.07
CPS1-201ENST00000233072 GSTO1P78417 241 aa8.39□□□□□ -1.07
CPS1-201ENST00000233072 SPTY2D1Q68D10 685 aaPredicted RBP8.39□□□□□ -1.07
CPS1-201ENST00000233072 SEPT11Q9NVA2 429 aaKnown RBP8.39□□□□□ -1.07
CPS1-201ENST00000233072 CTTNBP2Q8WZ74 1663 aa8.39□□□□□ -1.07
CPS1-201ENST00000233072 CAVIN2O95810 425 aa8.39□□□□□ -1.07
CPS1-201ENST00000233072 AMPD3Q01432 767 aa8.39□□□□□ -1.07
CPS1-201ENST00000233072 KANK3Q6NY19 840 aa8.39□□□□□ -1.07
CPS1-201ENST00000233072 ARHGAP29Q52LW3 1261 aa8.39□□□□□ -1.07
CPS1-201ENST00000233072 DDX12PQ92771 950 aa8.39□□□□□ -1.07
CPS1-201ENST00000233072 RPRD2Q5VT52 1461 aaKnown RBP8.39□□□□□ -1.07
CPS1-201ENST00000233072 CASQ1P31415 396 aa8.39□□□□□ -1.07
CPS1-201ENST00000233072 MCM4P33991 863 aa8.39□□□□□ -1.07
CPS1-201ENST00000233072 RRS1Q15050 365 aaKnown RBP8.39□□□□□ -1.07
CPS1-201ENST00000233072 DDX19AQ9NUU7 478 aaKnown RBP8.39□□□□□ -1.07
CPS1-201ENST00000233072 TTC21AQ8NDW8 1320 aa8.38□□□□□ -1.07
CPS1-201ENST00000233072 KIF5CO60282 957 aa8.38□□□□□ -1.07
CPS1-201ENST00000233072 GSDMDP57764 484 aa8.38□□□□□ -1.07
CPS1-201ENST00000233072 TRAF1Q13077 416 aa8.38□□□□□ -1.07
CPS1-201ENST00000233072 IQCA1Q86XH1 822 aa8.38□□□□□ -1.07
CPS1-201ENST00000233072 DZIP1Q86YF9 867 aaKnown RBP8.38□□□□□ -1.07
CPS1-201ENST00000233072 NAPBQ9H115 298 aa8.38□□□□□ -1.07
CPS1-201ENST00000233072 GCOM1H8Y6P7 765 aaPredicted RBP8.38□□□□□ -1.07
CPS1-201ENST00000233072 IDH1O75874 414 aaKnown RBP8.38□□□□□ -1.07
CPS1-201ENST00000233072 MYZAPP0CAP1 466 aa8.38□□□□□ -1.07
CPS1-201ENST00000233072 IFIT5Q13325 482 aaKnown RBP8.38□□□□□ -1.07
CPS1-201ENST00000233072 CRACR2BQ8N4Y2 399 aaPredicted RBP8.38□□□□□ -1.07
CPS1-201ENST00000233072 KIF5BP33176 963 aa8.38□□□□□ -1.07
CPS1-201ENST00000233072 DNAAF4Q8WXU2 420 aa8.38□□□□□ -1.07
CPS1-201ENST00000233072 SLC12A7Q9Y666 1083 aa8.38□□□□□ -1.07
CPS1-201ENST00000233072 FANCAO15360 1455 aa8.38□□□□□ -1.07
CPS1-201ENST00000233072 LDHCP07864 332 aa8.38□□□□□ -1.07
CPS1-201ENST00000233072 MYD88Q99836 296 aa8.38□□□□□ -1.07
CPS1-201ENST00000233072 DBF4Q9UBU7 674 aaPredicted RBP8.38□□□□□ -1.07
CPS1-201ENST00000233072 WASLO00401 505 aaPredicted RBP8.37□□□□□ -1.07
CPS1-201ENST00000233072 RRP9O43818 475 aaKnown RBP8.37□□□□□ -1.07
CPS1-201ENST00000233072 USO1O60763 962 aaKnown RBP8.37□□□□□ -1.07
CPS1-201ENST00000233072 DMRT2Q9Y5R5 561 aa8.37□□□□□ -1.07
CPS1-201ENST00000233072 CATIPQ7Z7H3 387 aa8.37□□□□□ -1.07
CPS1-201ENST00000233072 MKNK2Q9HBH9 465 aa8.37□□□□□ -1.07
CPS1-201ENST00000233072 ASXL1Q8IXJ9 1541 aa8.37□□□□□ -1.07
CPS1-201ENST00000233072 NUTM2BA6NNL0 878 aaPredicted RBP8.37□□□□□ -1.07
CPS1-201ENST00000233072 NUTM2EB1AL46 878 aaPredicted RBP8.37□□□□□ -1.07
CPS1-201ENST00000233072 YEATS4O95619 227 aa8.37□□□□□ -1.07
CPS1-201ENST00000233072 SSBP05455 408 aaKnown RBP eCLIP8.37□□□□□ -1.07
CPS1-201ENST00000233072 NUTM2AQ8IVF1 878 aaPredicted RBP8.37□□□□□ -1.07
CPS1-201ENST00000233072 C8orf76Q96K31 380 aa8.37□□□□□ -1.07
CPS1-201ENST00000233072 GTPBP4Q9BZE4 634 aaKnown RBP8.37□□□□□ -1.07
CPS1-201ENST00000233072 UQCRHLA0A096LP55 91 aa8.37□□□□□ -1.07
CPS1-201ENST00000233072 BMP15O95972 392 aa8.37□□□□□ -1.07
CPS1-201ENST00000233072 UQCRHP07919 91 aa8.37□□□□□ -1.07
CPS1-201ENST00000233072 UQCRFS1P1P0C7P4 283 aa8.37□□□□□ -1.07
CPS1-201ENST00000233072 UVSSAQ2YD98 709 aa8.37□□□□□ -1.07
CPS1-201ENST00000233072 NUTM1Q86Y26 1132 aa8.37□□□□□ -1.07
CPS1-201ENST00000233072 RPGRQ92834 1020 aaKnown RBP8.37□□□□□ -1.07
CPS1-201ENST00000233072 FAM107BQ9H098 131 aa8.37□□□□□ -1.07
CPS1-201ENST00000233072 RARSP54136 660 aaKnown RBP8.37□□□□□ -1.07
CPS1-201ENST00000233072 FILIP1Q7Z7B0 1213 aa8.37□□□□□ -1.07
CPS1-201ENST00000233072 ZNF444Q8N0Y2 327 aaPredicted RBP8.37□□□□□ -1.07
CPS1-201ENST00000233072 ALS2CR12Q96Q35 445 aa8.37□□□□□ -1.07
CPS1-201ENST00000233072 LIMCH1Q9UPQ0 1083 aa8.37□□□□□ -1.07
CPS1-201ENST00000233072 GOLGA6L10A0A0M3HER8 536 aa8.36□□□□□ -1.07
CPS1-201ENST00000233072 SHTN1A0MZ66 631 aa8.36□□□□□ -1.07
CPS1-201ENST00000233072 ZNF213O14771 459 aa8.36□□□□□ -1.07
CPS1-201ENST00000233072 SFPQP23246 707 aaKnown RBP eCLIP8.36□□□□□ -1.07
CPS1-201ENST00000233072 MCM5P33992 734 aa8.36□□□□□ -1.07
CPS1-201ENST00000233072 STX1AQ16623 288 aa8.36□□□□□ -1.07
CPS1-201ENST00000233072 PRPF40BQ6NWY9 871 aaKnown RBP8.36□□□□□ -1.07
CPS1-201ENST00000233072 CDC5LQ99459 802 aaKnown RBP8.36□□□□□ -1.07
CPS1-201ENST00000233072 CGNQ9P2M7 1197 aaKnown RBP8.36□□□□□ -1.07
CPS1-201ENST00000233072 ANKRD62A6NC57 917 aa8.36□□□□□ -1.07
CPS1-201ENST00000233072 CETN1Q12798 172 aa8.36□□□□□ -1.07
CPS1-201ENST00000233072 CFAP100Q494V2 611 aa8.36□□□□□ -1.07
CPS1-201ENST00000233072 MICALCLQ6ZW33 695 aa8.36□□□□□ -1.07
CPS1-201ENST00000233072 PHF8Q9UPP1 1060 aa8.36□□□□□ -1.07
CPS1-201ENST00000233072 GOLGA8AA7E2F4 631 aa8.36□□□□□ -1.07
CPS1-201ENST00000233072 GOLGA8BA8MQT2 603 aa8.36□□□□□ -1.07
CPS1-201ENST00000233072 EHBP1Q8NDI1 1231 aa8.36□□□□□ -1.07
CPS1-201ENST00000233072 CALML4Q96GE6 196 aa8.36□□□□□ -1.07
CPS1-201ENST00000233072 TAOK3Q9H2K8 898 aa8.36□□□□□ -1.07
CPS1-201ENST00000233072 RMND1Q9NWS8 449 aa8.36□□□□□ -1.07
CPS1-201ENST00000233072 KDM5BQ9UGL1 1544 aa8.36□□□□□ -1.07
CPS1-201ENST00000233072 NAA15Q9BXJ9 866 aaKnown RBP8.36□□□□□ -1.07
CPS1-201ENST00000233072 NOS1P29475 1434 aa8.36□□□□□ -1.07
CPS1-201ENST00000233072 STAMBPO95630 424 aa8.35□□□□□ -1.07
CPS1-201ENST00000233072 IFI16Q16666 785 aaKnown RBP8.35□□□□□ -1.07
CPS1-201ENST00000233072 PPP1R42Q7Z4L9 355 aa8.35□□□□□ -1.07
CPS1-201ENST00000233072 GOLIM4O00461 696 aa8.35□□□□□ -1.07
CPS1-201ENST00000233072 TMCO3Q6UWJ1 677 aa8.35□□□□□ -1.07
CPS1-201ENST00000233072 ZSCAN30Q86W11 494 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms