RNA–Protein interactions for RNA: ENST00000224807.9

SFXN3-201, Transcript of sideroflexin 3, humanhuman

TSL 5 BASIC

Gene SFXN3, Length 3,089 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-201ENST00000224807 STX6O43752 255 aa17.2■□□□□ 0.34
SFXN3-201ENST00000224807 LMOD3Q0VAK6 560 aa17.2■□□□□ 0.34
SFXN3-201ENST00000224807 RTF1Q92541 710 aaKnown RBP17.2■□□□□ 0.34
SFXN3-201ENST00000224807 GNAI2P04899 355 aa17.2■□□□□ 0.34
SFXN3-201ENST00000224807 RASEFQ8IZ41 740 aa17.2■□□□□ 0.34
SFXN3-201ENST00000224807 BBXQ8WY36 941 aaPredicted RBP17.2■□□□□ 0.34
SFXN3-201ENST00000224807 HSP90AB2PQ58FF8 381 aa17.19■□□□□ 0.34
SFXN3-201ENST00000224807 STK31Q9BXU1 1019 aa17.19■□□□□ 0.34
SFXN3-201ENST00000224807 KCNF1Q9H3M0 494 aa17.19■□□□□ 0.34
SFXN3-201ENST00000224807 CCDC9Q9Y3X0 531 aaKnown RBP17.19■□□□□ 0.34
SFXN3-201ENST00000224807 MYO5BQ9ULV0 1848 aa17.19■□□□□ 0.34
SFXN3-201ENST00000224807 PRIMPOLQ96LW4 560 aa17.19■□□□□ 0.34
SFXN3-201ENST00000224807 TRMT1Q9NXH9 659 aaKnown RBP17.19■□□□□ 0.34
SFXN3-201ENST00000224807 YEATS2Q9ULM3 1422 aa17.18■□□□□ 0.34
SFXN3-201ENST00000224807 NUTM2GQ5VZR2 741 aa17.18■□□□□ 0.34
SFXN3-201ENST00000224807 ANXA1P04083 346 aa17.18■□□□□ 0.34
SFXN3-201ENST00000224807 ZSCAN22P10073 491 aaPredicted RBP17.18■□□□□ 0.34
SFXN3-201ENST00000224807 GJB2P29033 226 aa17.18■□□□□ 0.34
SFXN3-201ENST00000224807 ARHGEF40Q8TER5 1519 aa17.18■□□□□ 0.34
SFXN3-201ENST00000224807 MAP2P11137 1827 aaKnown RBP17.17■□□□□ 0.34
SFXN3-201ENST00000224807 JAKMIP1Q96N16 626 aaKnown RBP17.17■□□□□ 0.34
SFXN3-201ENST00000224807 ATP10DQ9P241 1426 aa17.17■□□□□ 0.34
SFXN3-201ENST00000224807 TPD52L1Q16890 204 aaPredicted RBP17.17■□□□□ 0.34
SFXN3-201ENST00000224807 PRPF40BQ6NWY9 871 aaKnown RBP17.17■□□□□ 0.34
SFXN3-201ENST00000224807 NAP1L2Q9ULW6 460 aaPredicted RBP17.17■□□□□ 0.34
SFXN3-201ENST00000224807 DIAPH3Q9NSV4 1193 aa17.16■□□□□ 0.34
SFXN3-201ENST00000224807 MCM2P49736 904 aa17.16■□□□□ 0.34
SFXN3-201ENST00000224807 DLG5Q8TDM6 1919 aa17.16■□□□□ 0.34
SFXN3-201ENST00000224807 KIF24Q5T7B8 1368 aa17.16■□□□□ 0.34
SFXN3-201ENST00000224807 RIMS2Q9UQ26 1411 aa17.15■□□□□ 0.34
SFXN3-201ENST00000224807 FILIP1Q7Z7B0 1213 aa17.15■□□□□ 0.34
SFXN3-201ENST00000224807 TNNT1P13805 278 aa17.15■□□□□ 0.34
SFXN3-201ENST00000224807 FAM184AQ8NB25 1140 aa17.15■□□□□ 0.34
SFXN3-201ENST00000224807 ERCC4Q92889 916 aaPredicted RBP17.15■□□□□ 0.34
SFXN3-201ENST00000224807 LIG1P18858 919 aa17.14■□□□□ 0.33
SFXN3-201ENST00000224807 UBE2HP62256 183 aa17.14■□□□□ 0.33
SFXN3-201ENST00000224807 BICD2Q8TD16 824 aa17.14■□□□□ 0.33
SFXN3-201ENST00000224807 F13A1P00488 732 aa17.14■□□□□ 0.33
SFXN3-201ENST00000224807 ARID5BQ14865 1188 aa17.14■□□□□ 0.33
SFXN3-201ENST00000224807 DDX11Q96FC9 970 aa17.14■□□□□ 0.33
SFXN3-201ENST00000224807 CUL4AQ13619 759 aa17.13■□□□□ 0.33
SFXN3-201ENST00000224807 RUFY3Q7L099 469 aa17.13■□□□□ 0.33
SFXN3-201ENST00000224807 ADCK5Q3MIX3 580 aa17.13■□□□□ 0.33
SFXN3-201ENST00000224807 KIAA1524Q8TCG1 905 aa17.13■□□□□ 0.33
SFXN3-201ENST00000224807 SLC52A1Q9NWF4 448 aa17.13■□□□□ 0.33
SFXN3-201ENST00000224807 GOLGA6L6A8MZA4 724 aa17.12■□□□□ 0.33
SFXN3-201ENST00000224807 CCDC192P0DO97 292 aa17.12■□□□□ 0.33
SFXN3-201ENST00000224807 COL9A3Q14050 684 aaPredicted RBP17.12■□□□□ 0.33
SFXN3-201ENST00000224807 EIF4A2Q14240 407 aaKnown RBP17.12■□□□□ 0.33
SFXN3-201ENST00000224807 ANO6Q4KMQ2 910 aa17.12■□□□□ 0.33
SFXN3-201ENST00000224807 C14orf37Q86TY3 774 aa17.12■□□□□ 0.33
SFXN3-201ENST00000224807 RGS12O14924 1447 aa17.12■□□□□ 0.33
SFXN3-201ENST00000224807 NPM1P06748 294 aaKnown RBP eCLIP17.12■□□□□ 0.33
SFXN3-201ENST00000224807 UBTFL1P0CB47 393 aaPredicted RBP17.12■□□□□ 0.33
SFXN3-201ENST00000224807 LARP1BQ659C4 914 aaKnown RBP17.12■□□□□ 0.33
SFXN3-201ENST00000224807 DACT1Q9NYF0 836 aa17.12■□□□□ 0.33
SFXN3-201ENST00000224807 SNX14Q9Y5W7 946 aa17.12■□□□□ 0.33
SFXN3-201ENST00000224807 TMEM131LA2VDJ0 1609 aa17.12■□□□□ 0.33
SFXN3-201ENST00000224807 SRGAP3O43295 1099 aa17.12■□□□□ 0.33
SFXN3-201ENST00000224807 CDK11BP21127 795 aaKnown RBP17.12■□□□□ 0.33
SFXN3-201ENST00000224807 DNAJC25Q9H1X3 360 aa17.11■□□□□ 0.33
SFXN3-201ENST00000224807 PLCD3Q8N3E9 789 aa17.11■□□□□ 0.33
SFXN3-201ENST00000224807 TNMDQ9H2S6 317 aa17.11■□□□□ 0.33
SFXN3-201ENST00000224807 ST7Q9NRC1 585 aa17.11■□□□□ 0.33
SFXN3-201ENST00000224807 FLIIQ13045 1269 aa17.1■□□□□ 0.33
SFXN3-201ENST00000224807 GORABQ5T7V8 394 aa17.1■□□□□ 0.33
SFXN3-201ENST00000224807 LIMCH1Q9UPQ0 1083 aa17.1■□□□□ 0.33
SFXN3-201ENST00000224807 NUP62CLQ9H1M0 184 aa17.1■□□□□ 0.33
SFXN3-201ENST00000224807 ALKQ9UM73 1620 aa17.1■□□□□ 0.33
SFXN3-201ENST00000224807 CCDC112Q8NEF3 446 aa17.1■□□□□ 0.33
SFXN3-201ENST00000224807 PHAXQ9H814 394 aaKnown RBP17.1■□□□□ 0.33
SFXN3-201ENST00000224807 PDRG1Q9NUG6 133 aa17.1■□□□□ 0.33
SFXN3-201ENST00000224807 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.1■□□□□ 0.33
SFXN3-201ENST00000224807 CDK12Q9NYV4 1490 aaPredicted RBP17.09■□□□□ 0.33
SFXN3-201ENST00000224807 PPP1R42Q7Z4L9 355 aa17.09■□□□□ 0.33
SFXN3-201ENST00000224807 INTS4Q96HW7 963 aaKnown RBP17.09■□□□□ 0.33
SFXN3-201ENST00000224807 ATP7BP35670 1465 aa17.09■□□□□ 0.33
SFXN3-201ENST00000224807 PTH1RQ03431 593 aa17.08■□□□□ 0.33
SFXN3-201ENST00000224807 TYRO3Q06418 890 aa17.08■□□□□ 0.33
SFXN3-201ENST00000224807 UVSSAQ2YD98 709 aa17.08■□□□□ 0.33
SFXN3-201ENST00000224807 CDC37L1Q7L3B6 337 aa17.08■□□□□ 0.33
SFXN3-201ENST00000224807 FMNL2Q96PY5 1086 aa17.08■□□□□ 0.33
SFXN3-201ENST00000224807 RPAP1Q9BWH6 1393 aaPredicted RBP17.08■□□□□ 0.33
SFXN3-201ENST00000224807 NCBP1Q09161 790 aaKnown RBP17.08■□□□□ 0.32
SFXN3-201ENST00000224807 MAP3K11Q16584 847 aa17.08■□□□□ 0.32
SFXN3-201ENST00000224807 TTC6Q86TZ1 520 aa17.08■□□□□ 0.32
SFXN3-201ENST00000224807 NUDT16Q96DE0 195 aaKnown RBP17.08■□□□□ 0.32
SFXN3-201ENST00000224807 TCHHQ07283 1943 aa17.08■□□□□ 0.32
SFXN3-201ENST00000224807 CHL1O00533 1208 aa17.07■□□□□ 0.32
SFXN3-201ENST00000224807 CCT4P50991 539 aaKnown RBP17.07■□□□□ 0.32
SFXN3-201ENST00000224807 DIP2CQ9Y2E4 1556 aa17.07■□□□□ 0.32
SFXN3-201ENST00000224807 ATP6V1DQ9Y5K8 247 aa17.07■□□□□ 0.32
SFXN3-201ENST00000224807 CPSF1Q10570 1443 aaKnown RBP17.07■□□□□ 0.32
SFXN3-201ENST00000224807 MTHFSDQ2M296 383 aaKnown RBP17.07■□□□□ 0.32
SFXN3-201ENST00000224807 USHBP1Q8N6Y0 703 aa17.06■□□□□ 0.32
SFXN3-201ENST00000224807 LRRC2Q9BYS8 371 aa17.06■□□□□ 0.32
SFXN3-201ENST00000224807 CLIP2Q9UDT6 1046 aa17.06■□□□□ 0.32
SFXN3-201ENST00000224807 PA2G4Q9UQ80 394 aaKnown RBP17.06■□□□□ 0.32
SFXN3-201ENST00000224807 ZFP91Q96JP5 570 aaPredicted RBP17.06■□□□□ 0.32
SFXN3-201ENST00000224807 CBX8Q9HC52 389 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms