RNA–Protein interactions for RNA: ENST00000222266.2

PSENEN-201, Transcript of presenilin enhancer, gamma-secretase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSENEN, Length 603 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSENEN-201ENST00000222266 DLG5Q8TDM6 1919 aa13.12□□□□□ -0.31
PSENEN-201ENST00000222266 SENP3-EIF4A1A0A087X0R7 540 aa13.12□□□□□ -0.31
PSENEN-201ENST00000222266 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.12□□□□□ -0.31
PSENEN-201ENST00000222266 PHF14O94880 888 aa13.12□□□□□ -0.31
PSENEN-201ENST00000222266 HDGFL1Q5TGJ6 251 aa13.12□□□□□ -0.31
PSENEN-201ENST00000222266 DUSP27Q5VZP5 1158 aa13.12□□□□□ -0.31
PSENEN-201ENST00000222266 SLC4A9Q96Q91 983 aa13.12□□□□□ -0.31
PSENEN-201ENST00000222266 DBF4Q9UBU7 674 aaPredicted RBP13.12□□□□□ -0.31
PSENEN-201ENST00000222266 LY75O60449 1722 aa13.12□□□□□ -0.31
PSENEN-201ENST00000222266 ZNF831Q5JPB2 1677 aa13.12□□□□□ -0.31
PSENEN-201ENST00000222266 POLD1P28340 1107 aa13.11□□□□□ -0.31
PSENEN-201ENST00000222266 ZNF428Q96B54 188 aa13.11□□□□□ -0.31
PSENEN-201ENST00000222266 ZNF652Q9Y2D9 606 aa13.11□□□□□ -0.31
PSENEN-201ENST00000222266 USP16Q9Y5T5 823 aa13.11□□□□□ -0.31
PSENEN-201ENST00000222266 KCPQ6ZWJ8 1503 aa13.11□□□□□ -0.31
PSENEN-201ENST00000222266 RREB1Q92766 1687 aa13.1□□□□□ -0.31
PSENEN-201ENST00000222266 PSDA5PKW4 1024 aaPredicted RBP13.1□□□□□ -0.31
PSENEN-201ENST00000222266 CT47B1P0C2W7 299 aaPredicted RBP13.1□□□□□ -0.31
PSENEN-201ENST00000222266 ZNF827Q17R98 1081 aa13.1□□□□□ -0.31
PSENEN-201ENST00000222266 TWISTNBQ3B726 338 aaPredicted RBP13.1□□□□□ -0.31
PSENEN-201ENST00000222266 INTS5Q6P9B9 1019 aaKnown RBP13.1□□□□□ -0.31
PSENEN-201ENST00000222266 KIF6Q6ZMV9 814 aa13.1□□□□□ -0.31
PSENEN-201ENST00000222266 NLGN1Q8N2Q7 840 aa13.1□□□□□ -0.31
PSENEN-201ENST00000222266 TSR2Q969E8 191 aaKnown RBP13.1□□□□□ -0.31
PSENEN-201ENST00000222266 SPON1Q9HCB6 807 aa13.1□□□□□ -0.31
PSENEN-201ENST00000222266 ANO8Q9HCE9 1232 aaPredicted RBP13.1□□□□□ -0.31
PSENEN-201ENST00000222266 HYPKQ9NX55 129 aa13.1□□□□□ -0.31
PSENEN-201ENST00000222266 ZBED9Q6R2W3 1325 aa13.1□□□□□ -0.31
PSENEN-201ENST00000222266 FANCIQ9NVI1 1328 aa13.1□□□□□ -0.31
PSENEN-201ENST00000222266 DDX58O95786 925 aaKnown RBP13.09□□□□□ -0.31
PSENEN-201ENST00000222266 A1BGP04217 495 aa13.09□□□□□ -0.31
PSENEN-201ENST00000222266 MTFR1LQ9H019 292 aa13.09□□□□□ -0.31
PSENEN-201ENST00000222266 SIPA1L3O60292 1781 aaPredicted RBP13.09□□□□□ -0.31
PSENEN-201ENST00000222266 PAPPAQ13219 1627 aa13.09□□□□□ -0.31
PSENEN-201ENST00000222266 ZNF521Q96K83 1311 aa13.09□□□□□ -0.31
PSENEN-201ENST00000222266 ELL2O00472 640 aaPredicted RBP13.08□□□□□ -0.32
PSENEN-201ENST00000222266 SLFN5Q08AF3 891 aa13.08□□□□□ -0.32
PSENEN-201ENST00000222266 ARHGEF1Q92888 912 aaKnown RBP13.08□□□□□ -0.32
PSENEN-201ENST00000222266 DDX21Q9NR30 783 aaKnown RBP eCLIP13.08□□□□□ -0.32
PSENEN-201ENST00000222266 ZBTB1Q9Y2K1 713 aa13.08□□□□□ -0.32
PSENEN-201ENST00000222266 C5P01031 1676 aa13.08□□□□□ -0.32
PSENEN-201ENST00000222266 C4BP0C0L5 1744 aa13.08□□□□□ -0.32
PSENEN-201ENST00000222266 VIRMAQ69YN4 1812 aaKnown RBP13.07□□□□□ -0.32
PSENEN-201ENST00000222266 RGL2O15211 777 aa13.07□□□□□ -0.32
PSENEN-201ENST00000222266 MYL6BP14649 208 aa13.07□□□□□ -0.32
PSENEN-201ENST00000222266 EIF5P55010 431 aaKnown RBP13.07□□□□□ -0.32
PSENEN-201ENST00000222266 EXOSC9Q06265 439 aaKnown RBP13.07□□□□□ -0.32
PSENEN-201ENST00000222266 DZIP3Q86Y13 1208 aaKnown RBP13.07□□□□□ -0.32
PSENEN-201ENST00000222266 COL23A1Q86Y22 540 aaPredicted RBP13.07□□□□□ -0.32
PSENEN-201ENST00000222266 PPP1R1BQ9UD71 204 aaPredicted RBP13.07□□□□□ -0.32
PSENEN-201ENST00000222266 NUP188Q5SRE5 1749 aa13.07□□□□□ -0.32
PSENEN-201ENST00000222266 PNPLA7Q6ZV29 1317 aa13.07□□□□□ -0.32
PSENEN-201ENST00000222266 COL15A1P39059 1388 aa13.07□□□□□ -0.32
PSENEN-201ENST00000222266 NPHP1O15259 732 aa13.06□□□□□ -0.32
PSENEN-201ENST00000222266 C8orf58Q8NAV2 365 aa13.06□□□□□ -0.32
PSENEN-201ENST00000222266 NECTIN2Q92692 538 aa13.06□□□□□ -0.32
PSENEN-201ENST00000222266 NARFQ9UHQ1 456 aa13.06□□□□□ -0.32
PSENEN-201ENST00000222266 UBR2Q8IWV8 1755 aa13.06□□□□□ -0.32
PSENEN-201ENST00000222266 KDM3BQ7LBC6 1761 aa13.05□□□□□ -0.32
PSENEN-201ENST00000222266 PRAMEF22A3QJZ6 481 aa13.05□□□□□ -0.32
PSENEN-201ENST00000222266 HSP90AB3PQ58FF7 597 aa13.05□□□□□ -0.32
PSENEN-201ENST00000222266 CLEC4GQ6UXB4 293 aa13.05□□□□□ -0.32
PSENEN-201ENST00000222266 CICQ96RK0 1608 aaPredicted RBP13.05□□□□□ -0.32
PSENEN-201ENST00000222266 ERVV-1B6SEH8 477 aa13.04□□□□□ -0.32
PSENEN-201ENST00000222266 ZBTB7AO95365 584 aa13.04□□□□□ -0.32
PSENEN-201ENST00000222266 PARP3Q9Y6F1 533 aa13.04□□□□□ -0.32
PSENEN-201ENST00000222266 SLC4A2P04920 1241 aa13.03□□□□□ -0.32
PSENEN-201ENST00000222266 AIMP1Q12904 312 aaKnown RBP13.03□□□□□ -0.32
PSENEN-201ENST00000222266 KRT24Q2M2I5 525 aa13.03□□□□□ -0.32
PSENEN-201ENST00000222266 CHPF2Q9P2E5 772 aa13.03□□□□□ -0.32
PSENEN-201ENST00000222266 TBC1D2BQ9UPU7 963 aa13.03□□□□□ -0.32
PSENEN-201ENST00000222266 USP42Q9H9J4 1324 aaKnown RBP13.03□□□□□ -0.32
PSENEN-201ENST00000222266 VAMP4O75379 141 aa13.02□□□□□ -0.33
PSENEN-201ENST00000222266 NEXNQ0ZGT2 675 aa13.02□□□□□ -0.33
PSENEN-201ENST00000222266 ALDH1L2Q3SY69 923 aa13.02□□□□□ -0.33
PSENEN-201ENST00000222266 USPL1Q5W0Q7 1092 aa13.02□□□□□ -0.33
PSENEN-201ENST00000222266 RIC3Q7Z5B4 369 aa13.02□□□□□ -0.33
PSENEN-201ENST00000222266 SETDB2Q96T68 719 aa13.02□□□□□ -0.33
PSENEN-201ENST00000222266 ATF5Q9Y2D1 282 aaPredicted RBP13.02□□□□□ -0.33
PSENEN-201ENST00000222266 NBPF26B4DH59 902 aa13.01□□□□□ -0.33
PSENEN-201ENST00000222266 GYS1P13807 737 aa13.01□□□□□ -0.33
PSENEN-201ENST00000222266 HSP90B1P14625 803 aaKnown RBP13.01□□□□□ -0.33
PSENEN-201ENST00000222266 GTF2E1P29083 439 aaPredicted RBP13.01□□□□□ -0.33
PSENEN-201ENST00000222266 NBPF10Q6P3W6 841 aaKnown RBP13.01□□□□□ -0.33
PSENEN-201ENST00000222266 ANKRD13DQ6ZTN6 518 aa13.01□□□□□ -0.33
PSENEN-201ENST00000222266 COPS6Q7L5N1 327 aa13.01□□□□□ -0.33
PSENEN-201ENST00000222266 TRMT2AQ8IZ69 625 aaKnown RBP13.01□□□□□ -0.33
PSENEN-201ENST00000222266 NBPF15Q8N660 670 aa13.01□□□□□ -0.33
PSENEN-201ENST00000222266 TSPYL6Q8N831 410 aa13.01□□□□□ -0.33
PSENEN-201ENST00000222266 CDCA7LQ96GN5 454 aa13.01□□□□□ -0.33
PSENEN-201ENST00000222266 YTHDC1Q96MU7 727 aaKnown RBP13.01□□□□□ -0.33
PSENEN-201ENST00000222266 SPINK5Q9NQ38 1064 aaPredicted RBP13.01□□□□□ -0.33
PSENEN-201ENST00000222266 MAP3K15Q6ZN16 1313 aa13.01□□□□□ -0.33
PSENEN-201ENST00000222266 TJP1Q07157 1748 aa13.01□□□□□ -0.33
PSENEN-201ENST00000222266 TAF1LQ8IZX4 1826 aa13.01□□□□□ -0.33
PSENEN-201ENST00000222266 IPO8O15397 1037 aaKnown RBP13□□□□□ -0.33
PSENEN-201ENST00000222266 PIP4K2AP48426 406 aaPredicted RBP13□□□□□ -0.33
PSENEN-201ENST00000222266 PLBD2Q8NHP8 589 aa13□□□□□ -0.33
PSENEN-201ENST00000222266 XAGE3Q8WTP9 111 aa13□□□□□ -0.33
PSENEN-201ENST00000222266 NYXQ9GZU5 481 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms