RNA–Protein interactions for RNA: ENST00000220509.9

VPS18-201, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS18, Length 3,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-201ENST00000220509 SRGAP3O43295 1099 aa12.65□□□□□ -0.38
VPS18-201ENST00000220509 VAMP4O75379 141 aa12.65□□□□□ -0.38
VPS18-201ENST00000220509 LRRCC1Q9C099 1032 aa12.65□□□□□ -0.38
VPS18-201ENST00000220509 BAG4O95429 457 aaKnown RBP12.64□□□□□ -0.39
VPS18-201ENST00000220509 PPLO60437 1756 aa12.64□□□□□ -0.39
VPS18-201ENST00000220509 OFD1O75665 1012 aa12.64□□□□□ -0.39
VPS18-201ENST00000220509 ISY1Q9ULR0 285 aaKnown RBP12.64□□□□□ -0.39
VPS18-201ENST00000220509 ARHGEF40Q8TER5 1519 aa12.64□□□□□ -0.39
VPS18-201ENST00000220509 CD2BP2O95400 341 aaKnown RBP12.64□□□□□ -0.39
VPS18-201ENST00000220509 ANXA1P04083 346 aa12.64□□□□□ -0.39
VPS18-201ENST00000220509 SH3BP1Q9Y3L3 701 aa12.64□□□□□ -0.39
VPS18-201ENST00000220509 ZNF521Q96K83 1311 aa12.64□□□□□ -0.39
VPS18-201ENST00000220509 AGLP35573 1532 aa12.64□□□□□ -0.39
VPS18-201ENST00000220509 PRIM1P49642 420 aaKnown RBP12.63□□□□□ -0.39
VPS18-201ENST00000220509 TAF7Q15545 349 aaPredicted RBP12.63□□□□□ -0.39
VPS18-201ENST00000220509 PLEKHF1Q96S99 279 aa12.63□□□□□ -0.39
VPS18-201ENST00000220509 SIL1Q9H173 461 aa12.63□□□□□ -0.39
VPS18-201ENST00000220509 TMEM131LA2VDJ0 1609 aa12.63□□□□□ -0.39
VPS18-201ENST00000220509 SPDYE4A6NLX3 237 aa12.63□□□□□ -0.39
VPS18-201ENST00000220509 HSP90AB4PQ58FF6 505 aa12.63□□□□□ -0.39
VPS18-201ENST00000220509 HSP90AB3PQ58FF7 597 aa12.63□□□□□ -0.39
VPS18-201ENST00000220509 PRDM11Q9NQV5 511 aa12.63□□□□□ -0.39
VPS18-201ENST00000220509 GCP02774 474 aa12.63□□□□□ -0.39
VPS18-201ENST00000220509 TATP17735 454 aaPredicted RBP12.63□□□□□ -0.39
VPS18-201ENST00000220509 RUFY2Q8WXA3 655 aa12.63□□□□□ -0.39
VPS18-201ENST00000220509 TRERF1Q96PN7 1200 aa12.63□□□□□ -0.39
VPS18-201ENST00000220509 MEIS3Q99687 375 aa12.63□□□□□ -0.39
VPS18-201ENST00000220509 C19orf44Q9H6X5 657 aa12.63□□□□□ -0.39
VPS18-201ENST00000220509 NLRP1Q9C000 1473 aa12.63□□□□□ -0.39
VPS18-201ENST00000220509 LAMC1P11047 1609 aa12.63□□□□□ -0.39
VPS18-201ENST00000220509 SETBP1Q9Y6X0 1596 aa12.63□□□□□ -0.39
VPS18-201ENST00000220509 JARID2Q92833 1246 aaPredicted RBP12.63□□□□□ -0.39
VPS18-201ENST00000220509 SETQ01105 290 aaPredicted RBP12.62□□□□□ -0.39
VPS18-201ENST00000220509 DDX54Q8TDD1 881 aaKnown RBP12.62□□□□□ -0.39
VPS18-201ENST00000220509 TTC21AQ8NDW8 1320 aa12.62□□□□□ -0.39
VPS18-201ENST00000220509 HOXC9P31274 260 aa12.62□□□□□ -0.39
VPS18-201ENST00000220509 TSHZ3Q63HK5 1081 aa12.62□□□□□ -0.39
VPS18-201ENST00000220509 MRPL50Q8N5N7 158 aaKnown RBP12.62□□□□□ -0.39
VPS18-201ENST00000220509 NEUROD6Q96NK8 337 aa12.62□□□□□ -0.39
VPS18-201ENST00000220509 ZKSCAN1P17029 563 aaPredicted RBP12.62□□□□□ -0.39
VPS18-201ENST00000220509 FLIIQ13045 1269 aa12.62□□□□□ -0.39
VPS18-201ENST00000220509 ZNF500O60304 480 aaPredicted RBP12.61□□□□□ -0.39
VPS18-201ENST00000220509 ZSCAN23Q3MJ62 389 aa12.61□□□□□ -0.39
VPS18-201ENST00000220509 NUTM1Q86Y26 1132 aa12.61□□□□□ -0.39
VPS18-201ENST00000220509 KCNH5Q8NCM2 988 aa12.61□□□□□ -0.39
VPS18-201ENST00000220509 SIRT1Q96EB6 747 aa12.61□□□□□ -0.39
VPS18-201ENST00000220509 RBSNQ9H1K0 784 aa12.61□□□□□ -0.39
VPS18-201ENST00000220509 GDPD2Q9HCC8 539 aa12.61□□□□□ -0.39
VPS18-201ENST00000220509 IRF6O14896 467 aa12.61□□□□□ -0.39
VPS18-201ENST00000220509 HDAC1Q13547 482 aaPredicted RBP12.61□□□□□ -0.39
VPS18-201ENST00000220509 TOM1L2Q6ZVM7 507 aa12.61□□□□□ -0.39
VPS18-201ENST00000220509 ERC2O15083 957 aa12.61□□□□□ -0.39
VPS18-201ENST00000220509 PIP4K2BP78356 416 aa12.61□□□□□ -0.39
VPS18-201ENST00000220509 RAB3GAP1Q15042 981 aa12.61□□□□□ -0.39
VPS18-201ENST00000220509 RABEP1Q15276 862 aa12.6□□□□□ -0.39
VPS18-201ENST00000220509 ANKRD24Q8TF21 1146 aa12.6□□□□□ -0.39
VPS18-201ENST00000220509 LRRFIP2Q9Y608 721 aaKnown RBP12.6□□□□□ -0.39
VPS18-201ENST00000220509 ADAMTS13Q76LX8 1427 aa12.6□□□□□ -0.39
VPS18-201ENST00000220509 CSPP1Q1MSJ5 1256 aa12.6□□□□□ -0.39
VPS18-201ENST00000220509 ZBTB40Q9NUA8 1239 aa12.6□□□□□ -0.39
VPS18-201ENST00000220509 GEMIN8Q9NWZ8 242 aaKnown RBP12.6□□□□□ -0.39
VPS18-201ENST00000220509 CIZ1Q9ULV3 898 aaPredicted RBP12.6□□□□□ -0.39
VPS18-201ENST00000220509 CHAF1AQ13111 956 aaPredicted RBP12.6□□□□□ -0.39
VPS18-201ENST00000220509 PKP1Q13835 747 aa12.6□□□□□ -0.39
VPS18-201ENST00000220509 TBC1D9Q6ZT07 1266 aa12.6□□□□□ -0.39
VPS18-201ENST00000220509 C17orf53Q8N3J3 647 aaPredicted RBP12.6□□□□□ -0.39
VPS18-201ENST00000220509 NUCB2P80303 420 aa12.59□□□□□ -0.39
VPS18-201ENST00000220509 SYAP1Q96A49 352 aaPredicted RBP12.59□□□□□ -0.39
VPS18-201ENST00000220509 CNTROBQ8N137 903 aa12.59□□□□□ -0.39
VPS18-201ENST00000220509 FLT4P35916 1363 aa12.59□□□□□ -0.39
VPS18-201ENST00000220509 KLHL40Q2TBA0 621 aa12.59□□□□□ -0.39
VPS18-201ENST00000220509 C16orf71Q8IYS4 520 aaPredicted RBP12.59□□□□□ -0.39
VPS18-201ENST00000220509 PIK3R5Q8WYR1 880 aa12.59□□□□□ -0.39
VPS18-201ENST00000220509 NUTM2BA6NNL0 878 aaPredicted RBP12.58□□□□□ -0.4
VPS18-201ENST00000220509 NUTM2EB1AL46 878 aaPredicted RBP12.58□□□□□ -0.4
VPS18-201ENST00000220509 NUCB1Q02818 461 aa12.58□□□□□ -0.4
VPS18-201ENST00000220509 NUTM2AQ8IVF1 878 aaPredicted RBP12.58□□□□□ -0.4
VPS18-201ENST00000220509 CCDC39Q9UFE4 941 aa12.58□□□□□ -0.4
VPS18-201ENST00000220509 VPS37CA5D8V6 355 aaPredicted RBP12.58□□□□□ -0.4
VPS18-201ENST00000220509 RBM25P49756 843 aaKnown RBP12.58□□□□□ -0.4
VPS18-201ENST00000220509 NBPF6Q5VWK0 638 aa12.58□□□□□ -0.4
VPS18-201ENST00000220509 CADPS2Q86UW7 1296 aa12.58□□□□□ -0.4
VPS18-201ENST00000220509 DRC7Q8IY82 874 aa12.58□□□□□ -0.4
VPS18-201ENST00000220509 NBPF4Q96M43 638 aa12.58□□□□□ -0.4
VPS18-201ENST00000220509 FSD1Q9BTV5 496 aa12.58□□□□□ -0.4
VPS18-201ENST00000220509 ZC3H13Q5T200 1668 aaKnown RBP12.58□□□□□ -0.4
VPS18-201ENST00000220509 PTPRUQ92729 1446 aa12.58□□□□□ -0.4
VPS18-201ENST00000220509 INSRP06213 1382 aa12.58□□□□□ -0.4
VPS18-201ENST00000220509 CCDC66A2RUB6 948 aa12.58□□□□□ -0.4
VPS18-201ENST00000220509 ARHGAP45Q92619 1136 aa12.58□□□□□ -0.4
VPS18-201ENST00000220509 CABP4P57796 275 aa12.57□□□□□ -0.4
VPS18-201ENST00000220509 ZGPATQ8N5A5 531 aaKnown RBP12.57□□□□□ -0.4
VPS18-201ENST00000220509 ZNF513Q8N8E2 541 aaPredicted RBP12.57□□□□□ -0.4
VPS18-201ENST00000220509 TRMT2AQ8IZ69 625 aaKnown RBP12.57□□□□□ -0.4
VPS18-201ENST00000220509 SPC24Q8NBT2 197 aa12.57□□□□□ -0.4
VPS18-201ENST00000220509 UPF3BQ9BZI7 483 aaKnown RBP12.57□□□□□ -0.4
VPS18-201ENST00000220509 TOMM22Q9NS69 142 aa12.57□□□□□ -0.4
VPS18-201ENST00000220509 FAM135BQ49AJ0 1406 aa12.57□□□□□ -0.4
VPS18-201ENST00000220509 KIAA1210Q9ULL0 1709 aa12.57□□□□□ -0.4
VPS18-201ENST00000220509 GTF2A1P52655 376 aaPredicted RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms