RNA–Protein interactions for RNA: ENST00000216414.12

CDKN3-201, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best)

Gene CDKN3, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-201ENST00000216414 NDFIP2Q9NV92 336 aa6.77□□□□□ -1.33
CDKN3-201ENST00000216414 VAC14Q08AM6 782 aa6.76□□□□□ -1.33
CDKN3-201ENST00000216414 NEURL1BA8MQ27 555 aa6.75□□□□□ -1.33
CDKN3-201ENST00000216414 INHAP05111 366 aa6.75□□□□□ -1.33
CDKN3-201ENST00000216414 HOXB4P17483 251 aaPredicted RBP6.75□□□□□ -1.33
CDKN3-201ENST00000216414 GATA4P43694 442 aa6.75□□□□□ -1.33
CDKN3-201ENST00000216414 IRF5Q13568 498 aa6.75□□□□□ -1.33
CDKN3-201ENST00000216414 ZCCHC2Q9C0B9 1178 aaKnown RBP6.75□□□□□ -1.33
CDKN3-201ENST00000216414 PCDHGC4Q9Y5F7 938 aa6.75□□□□□ -1.33
CDKN3-201ENST00000216414 DCDC2BA2VCK2 349 aa6.74□□□□□ -1.33
CDKN3-201ENST00000216414 ATXN7O15265 892 aaPredicted RBP6.74□□□□□ -1.33
CDKN3-201ENST00000216414 ARAFP10398 606 aa6.74□□□□□ -1.33
CDKN3-201ENST00000216414 EPXP11678 715 aa6.74□□□□□ -1.33
CDKN3-201ENST00000216414 ATP4AP20648 1035 aa6.74□□□□□ -1.33
CDKN3-201ENST00000216414 SCNN1DP51172 638 aa6.74□□□□□ -1.33
CDKN3-201ENST00000216414 ARSJQ5FYB0 599 aaPredicted RBP6.74□□□□□ -1.33
CDKN3-201ENST00000216414 NIFKQ9BYG3 293 aaKnown RBP6.74□□□□□ -1.33
CDKN3-201ENST00000216414 DNAAF2Q9NVR5 837 aaKnown RBP6.74□□□□□ -1.33
CDKN3-201ENST00000216414 SERTAD1Q9UHV2 236 aa6.74□□□□□ -1.33
CDKN3-201ENST00000216414 ITGB7P26010 798 aa6.73□□□□□ -1.33
CDKN3-201ENST00000216414 ABL2P42684 1182 aa6.73□□□□□ -1.33
CDKN3-201ENST00000216414 SMTNP53814 917 aa6.73□□□□□ -1.33
CDKN3-201ENST00000216414 NLRP8Q86W28 1048 aa6.73□□□□□ -1.33
CDKN3-201ENST00000216414 PLPP7Q8NBV4 271 aa6.73□□□□□ -1.33
CDKN3-201ENST00000216414 C1orf216Q8TAB5 229 aa6.73□□□□□ -1.33
CDKN3-201ENST00000216414 A0A1W2PNR3 127 aa6.72□□□□□ -1.33
CDKN3-201ENST00000216414 KHNYNO15037 678 aaKnown RBP6.72□□□□□ -1.33
CDKN3-201ENST00000216414 CD33P20138 364 aa6.72□□□□□ -1.33
CDKN3-201ENST00000216414 DGKGP49619 791 aa6.72□□□□□ -1.33
CDKN3-201ENST00000216414 NBPF1Q3BBV0 1214 aa6.72□□□□□ -1.33
CDKN3-201ENST00000216414 LCE3BQ5TA77 95 aa6.72□□□□□ -1.33
CDKN3-201ENST00000216414 CHSY3Q70JA7 882 aa6.72□□□□□ -1.33
CDKN3-201ENST00000216414 GDPD2Q9HCC8 539 aa6.72□□□□□ -1.33
CDKN3-201ENST00000216414 CHIC2Q9UKJ5 165 aa6.72□□□□□ -1.33
CDKN3-201ENST00000216414 GJA3Q9Y6H8 435 aa6.72□□□□□ -1.33
CDKN3-201ENST00000216414 MAPTP10636 758 aaKnown RBP6.71□□□□□ -1.34
CDKN3-201ENST00000216414 MAP7D1Q3KQU3 841 aa6.71□□□□□ -1.34
CDKN3-201ENST00000216414 NBPF11Q86T75 865 aa6.71□□□□□ -1.34
CDKN3-201ENST00000216414 TATP17735 454 aaPredicted RBP6.7□□□□□ -1.34
CDKN3-201ENST00000216414 ADH6P28332 368 aa6.7□□□□□ -1.34
CDKN3-201ENST00000216414 SEMA3FQ13275 785 aa6.7□□□□□ -1.34
CDKN3-201ENST00000216414 ZFP64Q9NPA5 681 aa6.7□□□□□ -1.34
CDKN3-201ENST00000216414 CABP1Q9NZU7 370 aa6.7□□□□□ -1.34
CDKN3-201ENST00000216414 A6NJY4 79 aa6.69□□□□□ -1.34
CDKN3-201ENST00000216414 TMEM229AB2RXF0 380 aa6.69□□□□□ -1.34
CDKN3-201ENST00000216414 TNP2Q05952 138 aa6.69□□□□□ -1.34
CDKN3-201ENST00000216414 WASHC4Q2M389 1173 aa6.69□□□□□ -1.34
CDKN3-201ENST00000216414 PRR12Q9ULL5 1215 aa6.69□□□□□ -1.34
CDKN3-201ENST00000216414 BTBD11A6QL63 1104 aa6.68□□□□□ -1.34
CDKN3-201ENST00000216414 SLC24A1O60721 1099 aa6.68□□□□□ -1.34
CDKN3-201ENST00000216414 SPATA31C1P0DKV0 1188 aa6.68□□□□□ -1.34
CDKN3-201ENST00000216414 PCBP4P57723 403 aaKnown RBP6.68□□□□□ -1.34
CDKN3-201ENST00000216414 FAM182BQ5T319 152 aa6.68□□□□□ -1.34
CDKN3-201ENST00000216414 BICDL1Q6ZP65 573 aa6.68□□□□□ -1.34
CDKN3-201ENST00000216414 FCHSD1Q86WN1 690 aa6.68□□□□□ -1.34
CDKN3-201ENST00000216414 KLF15Q9UIH9 416 aa6.68□□□□□ -1.34
CDKN3-201ENST00000216414 HCN2Q9UL51 889 aa6.68□□□□□ -1.34
CDKN3-201ENST00000216414 PARP3Q9Y6F1 533 aa6.68□□□□□ -1.34
CDKN3-201ENST00000216414 USP3Q9Y6I4 520 aa6.68□□□□□ -1.34
CDKN3-201ENST00000216414 SPDYE3A6NKU9 549 aa6.67□□□□□ -1.34
CDKN3-201ENST00000216414 CDK2AP1O14519 115 aa6.67□□□□□ -1.34
CDKN3-201ENST00000216414 MTFR1Q15390 333 aa6.67□□□□□ -1.34
CDKN3-201ENST00000216414 ARTNQ5T4W7 220 aa6.67□□□□□ -1.34
CDKN3-201ENST00000216414 ZIC5Q96T25 663 aa6.67□□□□□ -1.34
CDKN3-201ENST00000216414 AVENQ9NQS1 362 aaPredicted RBP6.67□□□□□ -1.34
CDKN3-201ENST00000216414 ZDHHC3Q9NYG2 299 aa6.67□□□□□ -1.34
CDKN3-201ENST00000216414 IQSEC3Q9UPP2 1182 aaPredicted RBP6.67□□□□□ -1.34
CDKN3-201ENST00000216414 FAM157BP0CG42 384 aa6.66□□□□□ -1.34
CDKN3-201ENST00000216414 RSPO4Q2I0M5 234 aaPredicted RBP6.66□□□□□ -1.34
CDKN3-201ENST00000216414 SLC4A9Q96Q91 983 aa6.66□□□□□ -1.34
CDKN3-201ENST00000216414 PLVAPQ9BX97 442 aa6.66□□□□□ -1.34
CDKN3-201ENST00000216414 MARK1Q9P0L2 795 aa6.66□□□□□ -1.34
CDKN3-201ENST00000216414 PIK3CDO00329 1044 aa6.65□□□□□ -1.34
CDKN3-201ENST00000216414 SOX11P35716 441 aa6.65□□□□□ -1.34
CDKN3-201ENST00000216414 PSME1Q06323 249 aa6.65□□□□□ -1.34
CDKN3-201ENST00000216414 EML3Q32P44 896 aa6.65□□□□□ -1.34
CDKN3-201ENST00000216414 ZNF468Q5VIY5 522 aaPredicted RBP6.65□□□□□ -1.34
CDKN3-201ENST00000216414 ZNF295-AS1Q8N0V1 137 aa6.65□□□□□ -1.34
CDKN3-201ENST00000216414 KRTAP4-12Q9BQ66 201 aa6.65□□□□□ -1.34
CDKN3-201ENST00000216414 PCDHGA11Q9Y5H2 935 aa6.65□□□□□ -1.34
CDKN3-201ENST00000216414 BACH1O14867 736 aa6.64□□□□□ -1.35
CDKN3-201ENST00000216414 APBA3O96018 575 aa6.64□□□□□ -1.35
CDKN3-201ENST00000216414 SKIP12755 728 aa6.64□□□□□ -1.35
CDKN3-201ENST00000216414 TXLNAP40222 546 aa6.64□□□□□ -1.35
CDKN3-201ENST00000216414 PRRT3Q5FWE3 981 aa6.64□□□□□ -1.35
CDKN3-201ENST00000216414 TRIM11Q96F44 468 aa6.64□□□□□ -1.35
CDKN3-201ENST00000216414 STRN4Q9NRL3 753 aa6.64□□□□□ -1.35
CDKN3-201ENST00000216414 ALAS2P22557 587 aa6.63□□□□□ -1.35
CDKN3-201ENST00000216414 GTF2IP78347 998 aa6.63□□□□□ -1.35
CDKN3-201ENST00000216414 TPRNQ4KMQ1 711 aa6.63□□□□□ -1.35
CDKN3-201ENST00000216414 NKAPLQ5M9Q1 402 aa6.63□□□□□ -1.35
CDKN3-201ENST00000216414 SAMD5Q5TGI4 173 aa6.63□□□□□ -1.35
CDKN3-201ENST00000216414 NEUROD4Q9HD90 331 aa6.63□□□□□ -1.35
CDKN3-201ENST00000216414 NOD1Q9Y239 953 aa6.63□□□□□ -1.35
CDKN3-201ENST00000216414 ELOA3CA0A087WX78 387 aaPredicted RBP6.62□□□□□ -1.35
CDKN3-201ENST00000216414 ELOA3DA6NLF2 546 aaPredicted RBP6.62□□□□□ -1.35
CDKN3-201ENST00000216414 DYRK3O43781 588 aa6.62□□□□□ -1.35
CDKN3-201ENST00000216414 LAMC2Q13753 1193 aa6.62□□□□□ -1.35
CDKN3-201ENST00000216414 ELOA3BQ3SY89 546 aa6.62□□□□□ -1.35
CDKN3-201ENST00000216414 LRRC69Q6ZNQ3 347 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms