RNA–Protein interactions for RNA: ENST00000200181.7

ITGB4-201, Transcript of integrin subunit beta 4, humanhuman

TSL 1 (best) BASIC

Gene ITGB4, Length 5,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-201ENST00000200181 STX1AQ16623 288 aa19.84■□□□□ 0.77
ITGB4-201ENST00000200181 CDK19Q9BWU1 502 aa19.84■□□□□ 0.77
ITGB4-201ENST00000200181 TMOD2Q9NZR1 351 aa19.84■□□□□ 0.77
ITGB4-201ENST00000200181 PRPF4BQ13523 1007 aaKnown RBP19.84■□□□□ 0.77
ITGB4-201ENST00000200181 FSIP1Q8NA03 581 aa19.84■□□□□ 0.77
ITGB4-201ENST00000200181 CTCFLQ8NI51 663 aaPredicted RBP19.84■□□□□ 0.77
ITGB4-201ENST00000200181 SLC12A5Q9H2X9 1139 aa19.84■□□□□ 0.77
ITGB4-201ENST00000200181 MKNK2Q9HBH9 465 aa19.84■□□□□ 0.77
ITGB4-201ENST00000200181 HMGB1P09429 215 aaKnown RBP19.83■□□□□ 0.77
ITGB4-201ENST00000200181 SSFA2P28290 1259 aa19.83■□□□□ 0.77
ITGB4-201ENST00000200181 PPM1FP49593 454 aaPredicted RBP19.83■□□□□ 0.77
ITGB4-201ENST00000200181 SSRP1Q08945 709 aaKnown RBP19.83■□□□□ 0.76
ITGB4-201ENST00000200181 FERMT2Q96AC1 680 aa19.83■□□□□ 0.76
ITGB4-201ENST00000200181 MNAT1P51948 309 aa19.83■□□□□ 0.76
ITGB4-201ENST00000200181 NAPBQ9H115 298 aa19.82■□□□□ 0.76
ITGB4-201ENST00000200181 CADPSQ9ULU8 1353 aa19.82■□□□□ 0.76
ITGB4-201ENST00000200181 HSF2BPO75031 334 aa19.82■□□□□ 0.76
ITGB4-201ENST00000200181 SLC12A7Q9Y666 1083 aa19.82■□□□□ 0.76
ITGB4-201ENST00000200181 ADCY5O95622 1261 aa19.82■□□□□ 0.76
ITGB4-201ENST00000200181 CYB5RLQ6IPT4 315 aa19.82■□□□□ 0.76
ITGB4-201ENST00000200181 FBF1Q8TES7 1133 aa19.82■□□□□ 0.76
ITGB4-201ENST00000200181 CABP1Q9NZU7 370 aa19.82■□□□□ 0.76
ITGB4-201ENST00000200181 SMARCA5O60264 1052 aaPredicted RBP19.81■□□□□ 0.76
ITGB4-201ENST00000200181 CETN1Q12798 172 aa19.81■□□□□ 0.76
ITGB4-201ENST00000200181 DDX23Q9BUQ8 820 aaKnown RBP19.81■□□□□ 0.76
ITGB4-201ENST00000200181 MCM5P33992 734 aa19.81■□□□□ 0.76
ITGB4-201ENST00000200181 CEP135Q66GS9 1140 aa19.81■□□□□ 0.76
ITGB4-201ENST00000200181 DNAAF4Q8WXU2 420 aa19.81■□□□□ 0.76
ITGB4-201ENST00000200181 GTF2A1P52655 376 aaPredicted RBP19.81■□□□□ 0.76
ITGB4-201ENST00000200181 BBXQ8WY36 941 aaPredicted RBP19.81■□□□□ 0.76
ITGB4-201ENST00000200181 TSNARE1Q96NA8 513 aa19.81■□□□□ 0.76
ITGB4-201ENST00000200181 CCDC40Q4G0X9 1142 aa19.81■□□□□ 0.76
ITGB4-201ENST00000200181 CRACR2BQ8N4Y2 399 aaPredicted RBP19.81■□□□□ 0.76
ITGB4-201ENST00000200181 CUL5Q93034 780 aa19.81■□□□□ 0.76
ITGB4-201ENST00000200181 ZMYND15Q9H091 742 aa19.81■□□□□ 0.76
ITGB4-201ENST00000200181 ATP2C2O75185 946 aa19.8■□□□□ 0.76
ITGB4-201ENST00000200181 NOP2P46087 812 aaKnown RBP19.8■□□□□ 0.76
ITGB4-201ENST00000200181 TXNDC2Q86VQ3 553 aa19.8■□□□□ 0.76
ITGB4-201ENST00000200181 SERPINA10Q9UK55 444 aa19.8■□□□□ 0.76
ITGB4-201ENST00000200181 CCDC194A0A1B0GVG4 234 aa19.8■□□□□ 0.76
ITGB4-201ENST00000200181 TNPO1Q92973 898 aaKnown RBP19.8■□□□□ 0.76
ITGB4-201ENST00000200181 JADE2Q9NQC1 790 aa19.8■□□□□ 0.76
ITGB4-201ENST00000200181 PROSER2Q86WR7 435 aaPredicted RBP19.8■□□□□ 0.76
ITGB4-201ENST00000200181 BOLA2Q9H3K6 86 aa19.8■□□□□ 0.76
ITGB4-201ENST00000200181 HSPA4P34932 840 aa19.8■□□□□ 0.76
ITGB4-201ENST00000200181 FAM114A1Q8IWE2 563 aa19.8■□□□□ 0.76
ITGB4-201ENST00000200181 NLRP5P59047 1200 aa19.8■□□□□ 0.76
ITGB4-201ENST00000200181 BICDL1Q6ZP65 573 aa19.8■□□□□ 0.76
ITGB4-201ENST00000200181 TIGD1Q96MW7 591 aa19.8■□□□□ 0.76
ITGB4-201ENST00000200181 PUS7Q96PZ0 661 aaKnown RBP19.8■□□□□ 0.76
ITGB4-201ENST00000200181 LIMCH1Q9UPQ0 1083 aa19.8■□□□□ 0.76
ITGB4-201ENST00000200181 PPP1R14CQ8TAE6 165 aa19.79■□□□□ 0.76
ITGB4-201ENST00000200181 IFIT1P09914 478 aaKnown RBP19.79■□□□□ 0.76
ITGB4-201ENST00000200181 LIG1P18858 919 aa19.79■□□□□ 0.76
ITGB4-201ENST00000200181 CCDC12Q8WUD4 166 aaPredicted RBP19.79■□□□□ 0.76
ITGB4-201ENST00000200181 GOLGA8AA7E2F4 631 aa19.79■□□□□ 0.76
ITGB4-201ENST00000200181 GOLGA8BA8MQT2 603 aa19.79■□□□□ 0.76
ITGB4-201ENST00000200181 BIN1O00499 593 aa19.79■□□□□ 0.76
ITGB4-201ENST00000200181 PAXBP1Q9Y5B6 917 aa19.79■□□□□ 0.76
ITGB4-201ENST00000200181 CFAP57Q96MR6 1250 aa19.78■□□□□ 0.76
ITGB4-201ENST00000200181 CCDC96Q2M329 555 aa19.78■□□□□ 0.76
ITGB4-201ENST00000200181 SPTY2D1Q68D10 685 aaPredicted RBP19.78■□□□□ 0.76
ITGB4-201ENST00000200181 CAVIN4Q5BKX8 364 aa19.78■□□□□ 0.76
ITGB4-201ENST00000200181 CCDC82Q8N4S0 544 aa19.78■□□□□ 0.76
ITGB4-201ENST00000200181 DYNC1I1O14576 645 aa19.78■□□□□ 0.76
ITGB4-201ENST00000200181 CHMP4BP1P59074 171 aa19.78■□□□□ 0.76
ITGB4-201ENST00000200181 AMPD3Q01432 767 aa19.78■□□□□ 0.76
ITGB4-201ENST00000200181 NBPF1Q3BBV0 1214 aa19.78■□□□□ 0.76
ITGB4-201ENST00000200181 IKBKGQ9Y6K9 419 aa19.78■□□□□ 0.76
ITGB4-201ENST00000200181 TCERG1LQ5VWI1 586 aa19.78■□□□□ 0.76
ITGB4-201ENST00000200181 RANBP6O60518 1105 aaKnown RBP19.77■□□□□ 0.76
ITGB4-201ENST00000200181 EHBP1Q8NDI1 1231 aa19.77■□□□□ 0.76
ITGB4-201ENST00000200181 A0A087WZG4 1122 aa19.77■□□□□ 0.76
ITGB4-201ENST00000200181 IQCA1Q86XH1 822 aa19.77■□□□□ 0.76
ITGB4-201ENST00000200181 CCDC155Q8N6L0 562 aa19.77■□□□□ 0.76
ITGB4-201ENST00000200181 SRRTQ9BXP5 876 aaKnown RBP19.77■□□□□ 0.76
ITGB4-201ENST00000200181 FCHSD2O94868 740 aa19.77■□□□□ 0.76
ITGB4-201ENST00000200181 CALML4Q96GE6 196 aa19.77■□□□□ 0.76
ITGB4-201ENST00000200181 ZNF213O14771 459 aa19.77■□□□□ 0.75
ITGB4-201ENST00000200181 GNG11P61952 73 aa19.77■□□□□ 0.75
ITGB4-201ENST00000200181 NFE2L2Q16236 605 aa19.77■□□□□ 0.75
ITGB4-201ENST00000200181 EHMT1Q9H9B1 1298 aa19.77■□□□□ 0.75
ITGB4-201ENST00000200181 A0A1W2PRG0 241 aa19.77■□□□□ 0.75
ITGB4-201ENST00000200181 BAG4O95429 457 aaKnown RBP19.77■□□□□ 0.75
ITGB4-201ENST00000200181 PRC1O43663 620 aa19.76■□□□□ 0.75
ITGB4-201ENST00000200181 ZSWIM4Q9H7M6 989 aa19.76■□□□□ 0.75
ITGB4-201ENST00000200181 CKAP4Q07065 602 aaKnown RBP19.76■□□□□ 0.75
ITGB4-201ENST00000200181 SLFN5Q08AF3 891 aa19.76■□□□□ 0.75
ITGB4-201ENST00000200181 SF3B2Q13435 895 aaKnown RBP19.76■□□□□ 0.75
ITGB4-201ENST00000200181 CCDC6Q16204 474 aa19.76■□□□□ 0.75
ITGB4-201ENST00000200181 NSRP1Q9H0G5 558 aaKnown RBP19.76■□□□□ 0.75
ITGB4-201ENST00000200181 ZNF444Q8N0Y2 327 aaPredicted RBP19.76■□□□□ 0.75
ITGB4-201ENST00000200181 PRIMPOLQ96LW4 560 aa19.76■□□□□ 0.75
ITGB4-201ENST00000200181 PSMD1Q99460 953 aa19.76■□□□□ 0.75
ITGB4-201ENST00000200181 FAM69CQ0P6D2 419 aa19.75■□□□□ 0.75
ITGB4-201ENST00000200181 IFI16Q16666 785 aaKnown RBP19.75■□□□□ 0.75
ITGB4-201ENST00000200181 PABPN1LA6NDY0 278 aaKnown RBP19.75■□□□□ 0.75
ITGB4-201ENST00000200181 DDX12PQ92771 950 aa19.75■□□□□ 0.75
ITGB4-201ENST00000200181 FERMT1Q9BQL6 677 aa19.75■□□□□ 0.75
ITGB4-201ENST00000200181 RUSC2Q8N2Y8 1516 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms