RNA–Protein interactions for RNA: ENST00000081029.7

MRPS35-201, Transcript of mitochondrial ribosomal protein S35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPS35, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-201ENST00000081029 CFAP44Q96MT7 982 aa13.74□□□□□ -0.21
MRPS35-201ENST00000081029 CCDC87Q9NVE4 849 aa13.74□□□□□ -0.21
MRPS35-201ENST00000081029 A1BGP04217 495 aa13.73□□□□□ -0.21
MRPS35-201ENST00000081029 FLAD1Q8NFF5 587 aa13.73□□□□□ -0.21
MRPS35-201ENST00000081029 CNTNAP4Q9C0A0 1308 aa13.73□□□□□ -0.21
MRPS35-201ENST00000081029 RPS6KA4O75676 772 aa13.72□□□□□ -0.21
MRPS35-201ENST00000081029 EIF2S2P20042 333 aaKnown RBP13.72□□□□□ -0.21
MRPS35-201ENST00000081029 MSL1Q68DK7 614 aa13.72□□□□□ -0.21
MRPS35-201ENST00000081029 NPM2Q86SE8 214 aaKnown RBP13.72□□□□□ -0.21
MRPS35-201ENST00000081029 MBIPQ9NS73 344 aa13.72□□□□□ -0.21
MRPS35-201ENST00000081029 ZBTB1Q9Y2K1 713 aa13.72□□□□□ -0.21
MRPS35-201ENST00000081029 GIGYF1O75420 1035 aaPredicted RBP13.72□□□□□ -0.21
MRPS35-201ENST00000081029 SSFA2P28290 1259 aa13.72□□□□□ -0.21
MRPS35-201ENST00000081029 RFC4P35249 363 aa13.72□□□□□ -0.21
MRPS35-201ENST00000081029 GNAI1P63096 354 aa13.72□□□□□ -0.21
MRPS35-201ENST00000081029 CCDC27Q2M243 656 aa13.72□□□□□ -0.21
MRPS35-201ENST00000081029 KRT24Q2M2I5 525 aa13.72□□□□□ -0.21
MRPS35-201ENST00000081029 NECTIN2Q92692 538 aa13.72□□□□□ -0.21
MRPS35-201ENST00000081029 SPON1Q9HCB6 807 aa13.72□□□□□ -0.21
MRPS35-201ENST00000081029 BABAM1Q9NWV8 329 aa13.72□□□□□ -0.21
MRPS35-201ENST00000081029 ELL2O00472 640 aaPredicted RBP13.71□□□□□ -0.21
MRPS35-201ENST00000081029 ARHGEF1Q92888 912 aaKnown RBP13.71□□□□□ -0.21
MRPS35-201ENST00000081029 IFT57Q9NWB7 429 aa13.71□□□□□ -0.21
MRPS35-201ENST00000081029 UBR2Q8IWV8 1755 aa13.71□□□□□ -0.22
MRPS35-201ENST00000081029 NGEFQ8N5V2 710 aa13.7□□□□□ -0.22
MRPS35-201ENST00000081029 TSR2Q969E8 191 aaKnown RBP13.7□□□□□ -0.22
MRPS35-201ENST00000081029 TJP1Q07157 1748 aa13.7□□□□□ -0.22
MRPS35-201ENST00000081029 MYH14Q7Z406 1995 aaKnown RBP13.7□□□□□ -0.22
MRPS35-201ENST00000081029 MTFR1LQ9H019 292 aa13.7□□□□□ -0.22
MRPS35-201ENST00000081029 SRCAPQ6ZRS2 3230 aa13.69□□□□□ -0.22
MRPS35-201ENST00000081029 ZNF853P0CG23 659 aa13.69□□□□□ -0.22
MRPS35-201ENST00000081029 PPP1R1BQ9UD71 204 aaPredicted RBP13.69□□□□□ -0.22
MRPS35-201ENST00000081029 TUBGCP6Q96RT7 1819 aa13.68□□□□□ -0.22
MRPS35-201ENST00000081029 ZPR1O75312 459 aa13.68□□□□□ -0.22
MRPS35-201ENST00000081029 SLC16A10Q8TF71 515 aa13.68□□□□□ -0.22
MRPS35-201ENST00000081029 SRP68Q9UHB9 627 aaKnown RBP13.68□□□□□ -0.22
MRPS35-201ENST00000081029 COL5A3P25940 1745 aaPredicted RBP13.68□□□□□ -0.22
MRPS35-201ENST00000081029 ZNF831Q5JPB2 1677 aa13.68□□□□□ -0.22
MRPS35-201ENST00000081029 KDM3BQ7LBC6 1761 aa13.68□□□□□ -0.22
MRPS35-201ENST00000081029 MYL6BP14649 208 aa13.67□□□□□ -0.22
MRPS35-201ENST00000081029 WDR63Q8IWG1 891 aa13.67□□□□□ -0.22
MRPS35-201ENST00000081029 TBC1D2BQ9UPU7 963 aa13.67□□□□□ -0.22
MRPS35-201ENST00000081029 SOS1Q07889 1333 aaPredicted RBP13.67□□□□□ -0.22
MRPS35-201ENST00000081029 UBR3Q6ZT12 1888 aa13.67□□□□□ -0.22
MRPS35-201ENST00000081029 ADRA2BP18089 450 aa13.67□□□□□ -0.22
MRPS35-201ENST00000081029 DUSP27Q5VZP5 1158 aa13.67□□□□□ -0.22
MRPS35-201ENST00000081029 POLD1P28340 1107 aa13.66□□□□□ -0.22
MRPS35-201ENST00000081029 NCBP3Q53F19 620 aaKnown RBP13.66□□□□□ -0.22
MRPS35-201ENST00000081029 KLHL34Q8N239 644 aa13.66□□□□□ -0.22
MRPS35-201ENST00000081029 NBPF26B4DH59 902 aa13.65□□□□□ -0.22
MRPS35-201ENST00000081029 IL6STP40189 918 aaPredicted RBP13.65□□□□□ -0.22
MRPS35-201ENST00000081029 EIF5P55010 431 aaKnown RBP13.65□□□□□ -0.22
MRPS35-201ENST00000081029 USPL1Q5W0Q7 1092 aa13.65□□□□□ -0.22
MRPS35-201ENST00000081029 NBPF10Q6P3W6 841 aaKnown RBP13.65□□□□□ -0.22
MRPS35-201ENST00000081029 NBPF15Q8N660 670 aa13.65□□□□□ -0.22
MRPS35-201ENST00000081029 C8orf58Q8NAV2 365 aa13.65□□□□□ -0.22
MRPS35-201ENST00000081029 CDCA7LQ96GN5 454 aa13.65□□□□□ -0.22
MRPS35-201ENST00000081029 SPINK5Q9NQ38 1064 aaPredicted RBP13.65□□□□□ -0.22
MRPS35-201ENST00000081029 SUPT16HQ9Y5B9 1047 aaKnown RBP13.65□□□□□ -0.22
MRPS35-201ENST00000081029 COL15A1P39059 1388 aa13.65□□□□□ -0.22
MRPS35-201ENST00000081029 ZNF521Q96K83 1311 aa13.65□□□□□ -0.22
MRPS35-201ENST00000081029 ANXA1P04083 346 aa13.65□□□□□ -0.22
MRPS35-201ENST00000081029 CASZ1Q86V15 1759 aa13.65□□□□□ -0.22
MRPS35-201ENST00000081029 IL16Q14005 1332 aa13.64□□□□□ -0.23
MRPS35-201ENST00000081029 A0A087WZG4 1122 aa13.64□□□□□ -0.23
MRPS35-201ENST00000081029 PTGER2P43116 358 aa13.64□□□□□ -0.23
MRPS35-201ENST00000081029 GOLGA2Q08379 1002 aa13.64□□□□□ -0.23
MRPS35-201ENST00000081029 HDGFL1Q5TGJ6 251 aa13.64□□□□□ -0.23
MRPS35-201ENST00000081029 GYS1P13807 737 aa13.63□□□□□ -0.23
MRPS35-201ENST00000081029 DZIP3Q86Y13 1208 aaKnown RBP13.63□□□□□ -0.23
MRPS35-201ENST00000081029 NLGN1Q8N2Q7 840 aa13.63□□□□□ -0.23
MRPS35-201ENST00000081029 TSPYL6Q8N831 410 aa13.63□□□□□ -0.23
MRPS35-201ENST00000081029 MYH16Q9H6N6 1097 aa13.63□□□□□ -0.23
MRPS35-201ENST00000081029 NARFQ9UHQ1 456 aa13.63□□□□□ -0.23
MRPS35-201ENST00000081029 USP42Q9H9J4 1324 aaKnown RBP13.63□□□□□ -0.23
MRPS35-201ENST00000081029 FANCIQ9NVI1 1328 aa13.63□□□□□ -0.23
MRPS35-201ENST00000081029 TCERG1O14776 1098 aaKnown RBP13.63□□□□□ -0.23
MRPS35-201ENST00000081029 AIMP1Q12904 312 aaKnown RBP13.63□□□□□ -0.23
MRPS35-201ENST00000081029 FKBP8Q14318 412 aa13.63□□□□□ -0.23
MRPS35-201ENST00000081029 BICDL1Q6ZP65 573 aa13.63□□□□□ -0.23
MRPS35-201ENST00000081029 QSER1Q2KHR3 1735 aa13.63□□□□□ -0.23
MRPS35-201ENST00000081029 CICQ96RK0 1608 aaPredicted RBP13.62□□□□□ -0.23
MRPS35-201ENST00000081029 MMP10P09238 476 aa13.62□□□□□ -0.23
MRPS35-201ENST00000081029 PROSER3Q2NL68 480 aa13.62□□□□□ -0.23
MRPS35-201ENST00000081029 CHPF2Q9P2E5 772 aa13.62□□□□□ -0.23
MRPS35-201ENST00000081029 EXOSC9Q06265 439 aaKnown RBP13.61□□□□□ -0.23
MRPS35-201ENST00000081029 TWISTNBQ3B726 338 aaPredicted RBP13.61□□□□□ -0.23
MRPS35-201ENST00000081029 HOXB7P09629 217 aa13.6□□□□□ -0.23
MRPS35-201ENST00000081029 PDIA6Q15084 440 aa13.6□□□□□ -0.23
MRPS35-201ENST00000081029 SGIP1Q9BQI5 828 aa13.6□□□□□ -0.23
MRPS35-201ENST00000081029 KIF6Q6ZMV9 814 aa13.59□□□□□ -0.23
MRPS35-201ENST00000081029 TTLL7Q6ZT98 887 aa13.59□□□□□ -0.23
MRPS35-201ENST00000081029 ZBTB3Q9H5J0 574 aa13.59□□□□□ -0.23
MRPS35-201ENST00000081029 DBF4Q9UBU7 674 aaPredicted RBP13.59□□□□□ -0.23
MRPS35-201ENST00000081029 PARP3Q9Y6F1 533 aa13.59□□□□□ -0.23
MRPS35-201ENST00000081029 E9PSI1 815 aa13.59□□□□□ -0.23
MRPS35-201ENST00000081029 SLFN5Q08AF3 891 aa13.59□□□□□ -0.23
MRPS35-201ENST00000081029 COPS6Q7L5N1 327 aa13.59□□□□□ -0.23
MRPS35-201ENST00000081029 BCL2L12Q9HB09 334 aa13.59□□□□□ -0.23
MRPS35-201ENST00000081029 DDX21Q9NR30 783 aaKnown RBP eCLIP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms