RNA–Protein interactions for RNA: ENST00000011653.8

CD4-201, Transcript of CD4 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD4, Length 3,114 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-201ENST00000011653 TMEM57Q8N5G2 664 aa13.31□□□□□ -0.28
CD4-201ENST00000011653 TRPC5Q9UL62 973 aaPredicted RBP13.31□□□□□ -0.28
CD4-201ENST00000011653 IPO8O15397 1037 aaKnown RBP13.3□□□□□ -0.28
CD4-201ENST00000011653 PROSER3Q2NL68 480 aa13.3□□□□□ -0.28
CD4-201ENST00000011653 PTF1AQ7RTS3 328 aa13.3□□□□□ -0.28
CD4-201ENST00000011653 KIF16BQ96L93 1317 aa13.3□□□□□ -0.28
CD4-201ENST00000011653 GIGYF1O75420 1035 aaPredicted RBP13.3□□□□□ -0.28
CD4-201ENST00000011653 PDIA4P13667 645 aaKnown RBP13.3□□□□□ -0.28
CD4-201ENST00000011653 ALDH1L2Q3SY69 923 aa13.3□□□□□ -0.28
CD4-201ENST00000011653 SEPT12Q8IYM1 358 aa13.3□□□□□ -0.28
CD4-201ENST00000011653 THRAP3Q9Y2W1 955 aaKnown RBP13.3□□□□□ -0.28
CD4-201ENST00000011653 ABCC6O95255 1503 aa13.3□□□□□ -0.28
CD4-201ENST00000011653 FMNL2Q96PY5 1086 aa13.29□□□□□ -0.28
CD4-201ENST00000011653 ERVV-2B6SEH9 535 aa13.28□□□□□ -0.28
CD4-201ENST00000011653 C1orf115Q9H7X2 142 aa13.28□□□□□ -0.28
CD4-201ENST00000011653 CDCA7Q9BWT1 371 aaPredicted RBP13.28□□□□□ -0.28
CD4-201ENST00000011653 FLIIQ13045 1269 aa13.27□□□□□ -0.28
CD4-201ENST00000011653 A1BGP04217 495 aa13.27□□□□□ -0.29
CD4-201ENST00000011653 BARGINQ6ZT62 677 aa13.27□□□□□ -0.29
CD4-201ENST00000011653 C8orf34Q49A92 452 aa13.26□□□□□ -0.29
CD4-201ENST00000011653 FBXO41Q8TF61 875 aa13.26□□□□□ -0.29
CD4-201ENST00000011653 SNRPA1P09661 255 aaKnown RBP13.26□□□□□ -0.29
CD4-201ENST00000011653 NKX1-1Q15270 411 aaPredicted RBP13.26□□□□□ -0.29
CD4-201ENST00000011653 DISP2A7MBM2 1401 aa13.26□□□□□ -0.29
CD4-201ENST00000011653 RGS3P49796 1198 aa13.26□□□□□ -0.29
CD4-201ENST00000011653 PDE3AQ14432 1141 aa13.26□□□□□ -0.29
CD4-201ENST00000011653 DNAJC10Q8IXB1 793 aa13.26□□□□□ -0.29
CD4-201ENST00000011653 ATG3Q9NT62 314 aa13.26□□□□□ -0.29
CD4-201ENST00000011653 BABAM1Q9NWV8 329 aa13.25□□□□□ -0.29
CD4-201ENST00000011653 PARP4Q9UKK3 1724 aaKnown RBP13.24□□□□□ -0.29
CD4-201ENST00000011653 MVPQ14764 893 aaKnown RBP13.24□□□□□ -0.29
CD4-201ENST00000011653 API5Q9BZZ5 524 aaKnown RBP13.24□□□□□ -0.29
CD4-201ENST00000011653 TNS2Q63HR2 1409 aa13.24□□□□□ -0.29
CD4-201ENST00000011653 PI4KAP2A4QPH2 592 aa13.24□□□□□ -0.29
CD4-201ENST00000011653 PI4KAP1Q8N8J0 262 aa13.24□□□□□ -0.29
CD4-201ENST00000011653 DBF4Q9UBU7 674 aaPredicted RBP13.24□□□□□ -0.29
CD4-201ENST00000011653 NRAPQ86VF7 1730 aa13.22□□□□□ -0.29
CD4-201ENST00000011653 COPS6Q7L5N1 327 aa13.22□□□□□ -0.29
CD4-201ENST00000011653 XAGE3Q8WTP9 111 aa13.22□□□□□ -0.29
CD4-201ENST00000011653 SMIM5Q71RC9 77 aa13.22□□□□□ -0.29
CD4-201ENST00000011653 ATP6V1AP38606 617 aa13.22□□□□□ -0.29
CD4-201ENST00000011653 JARID2Q92833 1246 aaPredicted RBP13.22□□□□□ -0.29
CD4-201ENST00000011653 VIRMAQ69YN4 1812 aaKnown RBP13.21□□□□□ -0.29
CD4-201ENST00000011653 PKD1L3Q7Z443 1732 aa13.21□□□□□ -0.29
CD4-201ENST00000011653 SLC4A3P48751 1232 aa13.21□□□□□ -0.29
CD4-201ENST00000011653 RIC3Q7Z5B4 369 aa13.21□□□□□ -0.29
CD4-201ENST00000011653 SCN11AQ9UI33 1791 aa13.21□□□□□ -0.29
CD4-201ENST00000011653 HEG1Q9ULI3 1381 aa13.2□□□□□ -0.3
CD4-201ENST00000011653 TRIM37O94972 964 aa13.2□□□□□ -0.3
CD4-201ENST00000011653 ZNF772Q68DY9 489 aaPredicted RBP13.2□□□□□ -0.3
CD4-201ENST00000011653 SLC4A9Q96Q91 983 aa13.2□□□□□ -0.3
CD4-201ENST00000011653 ZBTB3Q9H5J0 574 aa13.2□□□□□ -0.3
CD4-201ENST00000011653 DDX19BQ9UMR2 479 aa13.2□□□□□ -0.3
CD4-201ENST00000011653 MAP3K2Q9Y2U5 619 aa13.2□□□□□ -0.3
CD4-201ENST00000011653 PCDHB15Q9Y5E8 787 aa13.2□□□□□ -0.3
CD4-201ENST00000011653 NFKBIBQ15653 356 aa13.2□□□□□ -0.3
CD4-201ENST00000011653 DHX37Q8IY37 1157 aaKnown RBP13.2□□□□□ -0.3
CD4-201ENST00000011653 LRRC37A3O60309 1634 aa13.2□□□□□ -0.3
CD4-201ENST00000011653 MEIS3Q99687 375 aa13.19□□□□□ -0.3
CD4-201ENST00000011653 ATP5J2-PTCD1G3V325 749 aa13.19□□□□□ -0.3
CD4-201ENST00000011653 KRT27Q7Z3Y8 459 aa13.19□□□□□ -0.3
CD4-201ENST00000011653 DDX21Q9NR30 783 aaKnown RBP eCLIP13.19□□□□□ -0.3
CD4-201ENST00000011653 NWD2Q9ULI1 1742 aa13.19□□□□□ -0.3
CD4-201ENST00000011653 NBPF26B4DH59 902 aa13.19□□□□□ -0.3
CD4-201ENST00000011653 APBB1O00213 710 aa13.19□□□□□ -0.3
CD4-201ENST00000011653 RXRBP28702 533 aa13.19□□□□□ -0.3
CD4-201ENST00000011653 CWF19L2Q2TBE0 894 aaKnown RBP13.19□□□□□ -0.3
CD4-201ENST00000011653 NBPF14Q5TI25 921 aa13.19□□□□□ -0.3
CD4-201ENST00000011653 NBPF10Q6P3W6 841 aaKnown RBP13.19□□□□□ -0.3
CD4-201ENST00000011653 POTEAQ6S8J7 498 aa13.19□□□□□ -0.3
CD4-201ENST00000011653 TTLL7Q6ZT98 887 aa13.19□□□□□ -0.3
CD4-201ENST00000011653 NBPF15Q8N660 670 aa13.19□□□□□ -0.3
CD4-201ENST00000011653 RBM6P78332 1123 aaKnown RBP13.18□□□□□ -0.3
CD4-201ENST00000011653 PDIA6Q15084 440 aa13.18□□□□□ -0.3
CD4-201ENST00000011653 LOC102724428A0A0B4J2F2 783 aa13.18□□□□□ -0.3
CD4-201ENST00000011653 HOXB7P09629 217 aa13.18□□□□□ -0.3
CD4-201ENST00000011653 SIK1P57059 783 aa13.18□□□□□ -0.3
CD4-201ENST00000011653 PTPRCP08575 1304 aa13.18□□□□□ -0.3
CD4-201ENST00000011653 BCL9O00512 1426 aa13.17□□□□□ -0.3
CD4-201ENST00000011653 IGHDP01880 384 aa13.17□□□□□ -0.3
CD4-201ENST00000011653 ARHGAP45Q92619 1136 aa13.17□□□□□ -0.3
CD4-201ENST00000011653 HYPKQ9NX55 129 aa13.17□□□□□ -0.3
CD4-201ENST00000011653 STARD3NLO95772 234 aa13.17□□□□□ -0.3
CD4-201ENST00000011653 DNAAF4Q8WXU2 420 aa13.17□□□□□ -0.3
CD4-201ENST00000011653 TBC1D2BQ9UPU7 963 aa13.17□□□□□ -0.3
CD4-201ENST00000011653 ZBTB1Q9Y2K1 713 aa13.17□□□□□ -0.3
CD4-201ENST00000011653 SHANK3Q9BYB0 1731 aa13.17□□□□□ -0.3
CD4-201ENST00000011653 MYD88Q99836 296 aa13.17□□□□□ -0.3
CD4-201ENST00000011653 GLI3P10071 1580 aa13.17□□□□□ -0.3
CD4-201ENST00000011653 ATRNO75882 1429 aa13.16□□□□□ -0.3
CD4-201ENST00000011653 FAM177BA6PVY3 158 aa13.16□□□□□ -0.3
CD4-201ENST00000011653 GSE1Q14687 1217 aa13.16□□□□□ -0.3
CD4-201ENST00000011653 PALLDQ8WX93 1383 aa13.16□□□□□ -0.3
CD4-201ENST00000011653 BRPF1P55201 1214 aaPredicted RBP13.16□□□□□ -0.3
CD4-201ENST00000011653 RGS17Q9UGC6 210 aaPredicted RBP13.16□□□□□ -0.3
CD4-201ENST00000011653 ABCC4O15439 1325 aa13.16□□□□□ -0.3
CD4-201ENST00000011653 ZBTB7BO15156 539 aaPredicted RBP13.15□□□□□ -0.3
CD4-201ENST00000011653 DDX58O95786 925 aaKnown RBP13.15□□□□□ -0.3
CD4-201ENST00000011653 ITPK1Q13572 414 aa13.15□□□□□ -0.3
CD4-201ENST00000011653 AAMPQ13685 434 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms