RNA–Protein interactions for RNA: ENST00000002829.7

SEMA3F-201, Transcript of semaphorin 3F, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SEMA3F, Length 3,802 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-201ENST00000002829 PTPRCP08575 1304 aa16.25■□□□□ 0.19
SEMA3F-201ENST00000002829 MADDQ8WXG6 1647 aa16.25■□□□□ 0.19
SEMA3F-201ENST00000002829 RAB11FIP3O75154 756 aa16.25■□□□□ 0.19
SEMA3F-201ENST00000002829 NSFL1CQ9UNZ2 370 aaKnown RBP16.25■□□□□ 0.19
SEMA3F-201ENST00000002829 CYP46A1Q9Y6A2 500 aa16.25■□□□□ 0.19
SEMA3F-201ENST00000002829 HOXC9P31274 260 aa16.24■□□□□ 0.19
SEMA3F-201ENST00000002829 SNX21Q969T3 373 aa16.24■□□□□ 0.19
SEMA3F-201ENST00000002829 ATF3P18847 181 aa16.24■□□□□ 0.19
SEMA3F-201ENST00000002829 CHMLP26374 656 aa16.24■□□□□ 0.19
SEMA3F-201ENST00000002829 HSP90AB3PQ58FF7 597 aa16.24■□□□□ 0.19
SEMA3F-201ENST00000002829 GADD45BO75293 160 aaPredicted RBP16.23■□□□□ 0.19
SEMA3F-201ENST00000002829 DDX46Q7L014 1031 aaKnown RBP16.23■□□□□ 0.19
SEMA3F-201ENST00000002829 CHST3Q7LGC8 479 aa16.23■□□□□ 0.19
SEMA3F-201ENST00000002829 CWC22Q9HCG8 908 aaKnown RBP16.23■□□□□ 0.19
SEMA3F-201ENST00000002829 ATP8B2P98198 1209 aa16.23■□□□□ 0.19
SEMA3F-201ENST00000002829 KLHL40Q2TBA0 621 aa16.23■□□□□ 0.19
SEMA3F-201ENST00000002829 ABCC4O15439 1325 aa16.23■□□□□ 0.19
SEMA3F-201ENST00000002829 CCT2P78371 535 aaKnown RBP16.22■□□□□ 0.19
SEMA3F-201ENST00000002829 ANKLE2Q86XL3 938 aa16.22■□□□□ 0.19
SEMA3F-201ENST00000002829 CCDC39Q9UFE4 941 aa16.22■□□□□ 0.19
SEMA3F-201ENST00000002829 SETD1BQ9UPS6 1966 aaKnown RBP16.22■□□□□ 0.19
SEMA3F-201ENST00000002829 NFATC2IPQ8NCF5 419 aa16.22■□□□□ 0.19
SEMA3F-201ENST00000002829 HSP90AB4PQ58FF6 505 aa16.22■□□□□ 0.19
SEMA3F-201ENST00000002829 ANKRD24Q8TF21 1146 aa16.22■□□□□ 0.19
SEMA3F-201ENST00000002829 PHF14O94880 888 aa16.21■□□□□ 0.19
SEMA3F-201ENST00000002829 USP48Q86UV5 1035 aa16.21■□□□□ 0.19
SEMA3F-201ENST00000002829 USP44Q9H0E7 712 aa16.21■□□□□ 0.19
SEMA3F-201ENST00000002829 COPS6Q7L5N1 327 aa16.21■□□□□ 0.19
SEMA3F-201ENST00000002829 HAND2P61296 217 aa16.21■□□□□ 0.18
SEMA3F-201ENST00000002829 PROSER3Q2NL68 480 aa16.21■□□□□ 0.18
SEMA3F-201ENST00000002829 BLOC1S2Q6QNY1 142 aa16.21■□□□□ 0.18
SEMA3F-201ENST00000002829 TOM1L2Q6ZVM7 507 aa16.21■□□□□ 0.18
SEMA3F-201ENST00000002829 PUS7Q96PZ0 661 aaKnown RBP16.21■□□□□ 0.18
SEMA3F-201ENST00000002829 MTMR7Q9Y216 660 aa16.21■□□□□ 0.18
SEMA3F-201ENST00000002829 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.21■□□□□ 0.18
SEMA3F-201ENST00000002829 RTL1A6NKG5 1358 aa16.21■□□□□ 0.18
SEMA3F-201ENST00000002829 ROBO2Q9HCK4 1378 aa16.21■□□□□ 0.18
SEMA3F-201ENST00000002829 CABP4P57796 275 aa16.2■□□□□ 0.18
SEMA3F-201ENST00000002829 TMEM63CQ9P1W3 806 aa16.2■□□□□ 0.18
SEMA3F-201ENST00000002829 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.2■□□□□ 0.18
SEMA3F-201ENST00000002829 V9GYY5 206 aaPredicted RBP16.2■□□□□ 0.18
SEMA3F-201ENST00000002829 WDR33Q9C0J8 1336 aaKnown RBP16.2■□□□□ 0.18
SEMA3F-201ENST00000002829 UNC13BO14795 1591 aa16.2■□□□□ 0.18
SEMA3F-201ENST00000002829 BECN2A8MW95 431 aa16.2■□□□□ 0.18
SEMA3F-201ENST00000002829 GJB2P29033 226 aa16.2■□□□□ 0.18
SEMA3F-201ENST00000002829 DNM1Q05193 864 aaKnown RBP16.2■□□□□ 0.18
SEMA3F-201ENST00000002829 PPP4R3BQ5MIZ7 849 aa16.2■□□□□ 0.18
SEMA3F-201ENST00000002829 ABCA6Q8N139 1617 aa16.2■□□□□ 0.18
SEMA3F-201ENST00000002829 AK2P54819 239 aa16.2■□□□□ 0.18
SEMA3F-201ENST00000002829 OFD1O75665 1012 aa16.19■□□□□ 0.18
SEMA3F-201ENST00000002829 XAGE3Q8WTP9 111 aa16.19■□□□□ 0.18
SEMA3F-201ENST00000002829 FAM227BQ96M60 508 aa16.19■□□□□ 0.18
SEMA3F-201ENST00000002829 ATP6V1DQ9Y5K8 247 aa16.19■□□□□ 0.18
SEMA3F-201ENST00000002829 A0A087WZG4 1122 aa16.19■□□□□ 0.18
SEMA3F-201ENST00000002829 MBD3O95983 291 aa16.19■□□□□ 0.18
SEMA3F-201ENST00000002829 ERICH4A6NGS2 130 aa16.19■□□□□ 0.18
SEMA3F-201ENST00000002829 RNF20Q5VTR2 975 aa16.19■□□□□ 0.18
SEMA3F-201ENST00000002829 CCDC129Q6ZRS4 1044 aa16.19■□□□□ 0.18
SEMA3F-201ENST00000002829 CCDC82Q8N4S0 544 aa16.19■□□□□ 0.18
SEMA3F-201ENST00000002829 TRIM5Q9C035 493 aa16.19■□□□□ 0.18
SEMA3F-201ENST00000002829 TATP17735 454 aaPredicted RBP16.18■□□□□ 0.18
SEMA3F-201ENST00000002829 DBF4Q9UBU7 674 aaPredicted RBP16.18■□□□□ 0.18
SEMA3F-201ENST00000002829 SOS1Q07889 1333 aaPredicted RBP16.18■□□□□ 0.18
SEMA3F-201ENST00000002829 MAP3K4Q9Y6R4 1608 aa16.18■□□□□ 0.18
SEMA3F-201ENST00000002829 GLRX3O76003 335 aaKnown RBP16.18■□□□□ 0.18
SEMA3F-201ENST00000002829 GPTP24298 496 aa16.18■□□□□ 0.18
SEMA3F-201ENST00000002829 KIF2CQ99661 725 aa16.18■□□□□ 0.18
SEMA3F-201ENST00000002829 ZNF853P0CG23 659 aa16.17■□□□□ 0.18
SEMA3F-201ENST00000002829 CSPP1Q1MSJ5 1256 aa16.17■□□□□ 0.18
SEMA3F-201ENST00000002829 ECHDC1Q9NTX5 307 aa16.17■□□□□ 0.18
SEMA3F-201ENST00000002829 CPLX1O14810 134 aa16.17■□□□□ 0.18
SEMA3F-201ENST00000002829 PRDM11Q9NQV5 511 aa16.17■□□□□ 0.18
SEMA3F-201ENST00000002829 MYOM2P54296 1465 aa16.16■□□□□ 0.18
SEMA3F-201ENST00000002829 RRP12Q5JTH9 1297 aaKnown RBP16.16■□□□□ 0.18
SEMA3F-201ENST00000002829 ISM2Q6H9L7 571 aa16.16■□□□□ 0.18
SEMA3F-201ENST00000002829 C16orf45Q96MC5 204 aaPredicted RBP16.16■□□□□ 0.18
SEMA3F-201ENST00000002829 GOLGA6L19H0YKK7 550 aa16.16■□□□□ 0.18
SEMA3F-201ENST00000002829 STX6O43752 255 aa16.16■□□□□ 0.18
SEMA3F-201ENST00000002829 ADCY5O95622 1261 aa16.16■□□□□ 0.18
SEMA3F-201ENST00000002829 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.16■□□□□ 0.18
SEMA3F-201ENST00000002829 EDC4Q6P2E9 1401 aaKnown RBP16.16■□□□□ 0.18
SEMA3F-201ENST00000002829 MCM2P49736 904 aa16.16■□□□□ 0.18
SEMA3F-201ENST00000002829 KRT28Q7Z3Y7 464 aa16.16■□□□□ 0.18
SEMA3F-201ENST00000002829 ISY1Q9ULR0 285 aaKnown RBP16.16■□□□□ 0.18
SEMA3F-201ENST00000002829 LIMCH1Q9UPQ0 1083 aa16.16■□□□□ 0.18
SEMA3F-201ENST00000002829 GOLIM4O00461 696 aa16.15■□□□□ 0.18
SEMA3F-201ENST00000002829 GCP02774 474 aa16.15■□□□□ 0.18
SEMA3F-201ENST00000002829 RASEFQ8IZ41 740 aa16.15■□□□□ 0.18
SEMA3F-201ENST00000002829 LMBRD1Q9NUN5 540 aa16.15■□□□□ 0.18
SEMA3F-201ENST00000002829 HDAC5Q9UQL6 1122 aa16.15■□□□□ 0.18
SEMA3F-201ENST00000002829 FLT4P35916 1363 aa16.15■□□□□ 0.18
SEMA3F-201ENST00000002829 PLXNC1O60486 1568 aa16.15■□□□□ 0.18
SEMA3F-201ENST00000002829 GPT2Q8TD30 523 aa16.15■□□□□ 0.18
SEMA3F-201ENST00000002829 RNF17Q9BXT8 1623 aaKnown RBP16.15■□□□□ 0.18
SEMA3F-201ENST00000002829 EFCAB6Q5THR3 1501 aa16.15■□□□□ 0.18
SEMA3F-201ENST00000002829 FILIP1Q7Z7B0 1213 aa16.15■□□□□ 0.18
SEMA3F-201ENST00000002829 SDF4Q9BRK5 362 aa16.15■□□□□ 0.18
SEMA3F-201ENST00000002829 BICC1Q9H694 974 aaKnown RBP16.15■□□□□ 0.18
SEMA3F-201ENST00000002829 RBM8AQ9Y5S9 174 aaKnown RBP16.15■□□□□ 0.18
SEMA3F-201ENST00000002829 ZKSCAN5Q9Y2L8 839 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms