RNA–Protein interactions for RNA: ENSMUST00000210369.1

Ssbp4-205, Transcript of Single stranded DNA binding protein 4, isoform CRA_b, mousemouse

TSL 2 BASIC

Gene Ssbp4, Length 1,828 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp4-205ENSMUST00000210369 Pnmal2G3X9N3 661 aa29.43■■■□□ 2.3
Ssbp4-205ENSMUST00000210369 Atp8b2P98199 1209 aa29.42■■■□□ 2.3
Ssbp4-205ENSMUST00000210369 Bend3Q6PAL0 825 aa29.42■■■□□ 2.3
Ssbp4-205ENSMUST00000210369 PappaQ8R4K8 1624 aa29.41■■■□□ 2.3
Ssbp4-205ENSMUST00000210369 HellsQ60848 821 aa29.41■■■□□ 2.3
Ssbp4-205ENSMUST00000210369 Irf9Q61179 399 aa29.41■■■□□ 2.3
Ssbp4-205ENSMUST00000210369 Larp1Q6ZQ58 1072 aaKnown RBP29.41■■■□□ 2.3
Ssbp4-205ENSMUST00000210369 Cog6Q8R3I3 657 aa29.41■■■□□ 2.3
Ssbp4-205ENSMUST00000210369 Gm21680A0A0G2JGR8 267 aa29.4■■■□□ 2.3
Ssbp4-205ENSMUST00000210369 Nkx1-2P42580 305 aa29.4■■■□□ 2.3
Ssbp4-205ENSMUST00000210369 Nphp1Q9QY53 687 aa29.39■■■□□ 2.3
Ssbp4-205ENSMUST00000210369 Srgap3Q812A2 1099 aa29.38■■■□□ 2.29
Ssbp4-205ENSMUST00000210369 Dnai1Q8C0M8 701 aa29.38■■■□□ 2.29
Ssbp4-205ENSMUST00000210369 Pdia6Q922R8 440 aaKnown RBP29.38■■■□□ 2.29
Ssbp4-205ENSMUST00000210369 Tjp1P39447 1745 aaKnown RBP29.38■■■□□ 2.29
Ssbp4-205ENSMUST00000210369 Tiam2Q6ZPF3 1715 aa29.38■■■□□ 2.29
Ssbp4-205ENSMUST00000210369 Cers3Q1A3B0 383 aa29.37■■■□□ 2.29
Ssbp4-205ENSMUST00000210369 Ppp1r42Q8R1Z4 357 aa29.37■■■□□ 2.29
Ssbp4-205ENSMUST00000210369 CanxP35564 591 aaKnown RBP29.36■■■□□ 2.29
Ssbp4-205ENSMUST00000210369 Mum1Q6DID5 682 aa29.36■■■□□ 2.29
Ssbp4-205ENSMUST00000210369 FanclQ9CR14 375 aa29.36■■■□□ 2.29
Ssbp4-205ENSMUST00000210369 Mmp8O70138 465 aa29.36■■■□□ 2.29
Ssbp4-205ENSMUST00000210369 Cnnm1Q0GA42 951 aa29.35■■■□□ 2.29
Ssbp4-205ENSMUST00000210369 Flad1Q8R123 492 aa29.35■■■□□ 2.29
Ssbp4-205ENSMUST00000210369 Map3k2Q61083 619 aa29.34■■■□□ 2.29
Ssbp4-205ENSMUST00000210369 Efcab2Q9CQ46 164 aa29.34■■■□□ 2.29
Ssbp4-205ENSMUST00000210369 AceP09470 1312 aa29.34■■■□□ 2.29
Ssbp4-205ENSMUST00000210369 Erbb4Q61527 1308 aa29.34■■■□□ 2.29
Ssbp4-205ENSMUST00000210369 Bcl2l13P59017 434 aa29.34■■■□□ 2.29
Ssbp4-205ENSMUST00000210369 Exoc6bA6H5Z3 810 aa29.33■■■□□ 2.29
Ssbp4-205ENSMUST00000210369 Mphosph10Q810V0 681 aaKnown RBP29.33■■■□□ 2.29
Ssbp4-205ENSMUST00000210369 Kcnh4A2A5F7 1018 aa29.32■■■□□ 2.28
Ssbp4-205ENSMUST00000210369 Vps33bP59016 617 aa29.32■■■□□ 2.28
Ssbp4-205ENSMUST00000210369 Elp1Q7TT37 1333 aaKnown RBP29.32■■■□□ 2.28
Ssbp4-205ENSMUST00000210369 Nwd2Q6P5U7 1742 aa29.31■■■□□ 2.28
Ssbp4-205ENSMUST00000210369 Ankrd23Q812A3 306 aa29.31■■■□□ 2.28
Ssbp4-205ENSMUST00000210369 Ginm1Q91WR6 327 aa29.31■■■□□ 2.28
Ssbp4-205ENSMUST00000210369 Atg4a-psA0A0G2JFS9 396 aa29.31■■■□□ 2.28
Ssbp4-205ENSMUST00000210369 Rabep1O35551 862 aa29.31■■■□□ 2.28
Ssbp4-205ENSMUST00000210369 Cfdp1O88271 295 aaKnown RBP29.31■■■□□ 2.28
Ssbp4-205ENSMUST00000210369 Atg4aQ8C9S8 396 aa29.31■■■□□ 2.28
Ssbp4-205ENSMUST00000210369 Mst1rQ62190 1378 aa29.3■■■□□ 2.28
Ssbp4-205ENSMUST00000210369 Ccdc146E9Q9F7 977 aa29.3■■■□□ 2.28
Ssbp4-205ENSMUST00000210369 Zap70P43404 618 aa29.3■■■□□ 2.28
Ssbp4-205ENSMUST00000210369 Taok3Q8BYC6 898 aa29.3■■■□□ 2.28
Ssbp4-205ENSMUST00000210369 Sugp2Q8CH09 1067 aa29.3■■■□□ 2.28
Ssbp4-205ENSMUST00000210369 Tceal9Q9DD24 104 aa29.3■■■□□ 2.28
Ssbp4-205ENSMUST00000210369 Cyp46a1Q9WVK8 500 aa29.3■■■□□ 2.28
Ssbp4-205ENSMUST00000210369 Anapc15-psA0A140T8L6 141 aa29.29■■■□□ 2.28
Ssbp4-205ENSMUST00000210369 Ier5O89113 308 aa29.29■■■□□ 2.28
Ssbp4-205ENSMUST00000210369 Cwc27Q3TKY6 469 aa29.29■■■□□ 2.28
Ssbp4-205ENSMUST00000210369 CenppQ9CZ92 286 aa29.29■■■□□ 2.28
Ssbp4-205ENSMUST00000210369 Mcmdc2E9Q956 681 aa29.28■■■□□ 2.28
Ssbp4-205ENSMUST00000210369 Ddx60E9PZQ1 1711 aa29.28■■■□□ 2.28
Ssbp4-205ENSMUST00000210369 ChgaP26339 463 aaKnown RBP29.27■■■□□ 2.28
Ssbp4-205ENSMUST00000210369 Ankle2Q6P1H6 964 aa29.27■■■□□ 2.28
Ssbp4-205ENSMUST00000210369 Ppp1r9bQ6R891 817 aaKnown RBP29.27■■■□□ 2.28
Ssbp4-205ENSMUST00000210369 Mfap1aC0HKD8 439 aaKnown RBP29.26■■■□□ 2.27
Ssbp4-205ENSMUST00000210369 Mfap1bC0HKD9 439 aaKnown RBP29.26■■■□□ 2.27
Ssbp4-205ENSMUST00000210369 Ddb1Q3U1J4 1140 aaKnown RBP29.25■■■□□ 2.27
Ssbp4-205ENSMUST00000210369 Ints5Q8CHT3 1018 aa29.25■■■□□ 2.27
Ssbp4-205ENSMUST00000210369 Bicc1Q99MQ1 977 aaKnown RBP29.25■■■□□ 2.27
Ssbp4-205ENSMUST00000210369 Ly75Q60767 1723 aa29.25■■■□□ 2.27
Ssbp4-205ENSMUST00000210369 Sik1Q60670 779 aa29.24■■■□□ 2.27
Ssbp4-205ENSMUST00000210369 Prkab2Q6PAM0 271 aa29.24■■■□□ 2.27
Ssbp4-205ENSMUST00000210369 Eif2s2Q99L45 331 aaKnown RBP29.24■■■□□ 2.27
Ssbp4-205ENSMUST00000210369 Crb1Q8VHS2 1405 aa29.24■■■□□ 2.27
Ssbp4-205ENSMUST00000210369 Exoc5Q3TPX4 708 aa29.24■■■□□ 2.27
Ssbp4-205ENSMUST00000210369 Ppm1mQ8BU27 406 aa29.24■■■□□ 2.27
Ssbp4-205ENSMUST00000210369 Trim52Q8CDV4 233 aa29.24■■■□□ 2.27
Ssbp4-205ENSMUST00000210369 PigbQ9JJQ0 542 aa29.24■■■□□ 2.27
Ssbp4-205ENSMUST00000210369 Smarca5Q91ZW3 1051 aaKnown RBP29.23■■■□□ 2.27
Ssbp4-205ENSMUST00000210369 Ubap1lG3UW59 384 aa29.22■■■□□ 2.27
Ssbp4-205ENSMUST00000210369 Tbc1d9Q3UYK3 1264 aa29.22■■■□□ 2.27
Ssbp4-205ENSMUST00000210369 Kiaa0319Q5SZV5 1081 aa29.22■■■□□ 2.27
Ssbp4-205ENSMUST00000210369 4930523C07RikE9Q2T4 99 aa29.22■■■□□ 2.27
Ssbp4-205ENSMUST00000210369 Rgs17Q9QZB0 210 aa29.22■■■□□ 2.27
Ssbp4-205ENSMUST00000210369 Col22a1E9Q7P1 1613 aa29.21■■■□□ 2.27
Ssbp4-205ENSMUST00000210369 Grm8P47743 908 aa29.21■■■□□ 2.27
Ssbp4-205ENSMUST00000210369 Mylk2Q8VCR8 613 aa29.21■■■□□ 2.27
Ssbp4-205ENSMUST00000210369 Shank3Q4ACU6 1730 aa29.21■■■□□ 2.27
Ssbp4-205ENSMUST00000210369 Zkscan2G3X952 960 aa29.2■■■□□ 2.26
Ssbp4-205ENSMUST00000210369 Nek4Q9Z1J2 792 aa29.2■■■□□ 2.26
Ssbp4-205ENSMUST00000210369 Ppp6r1Q7TSI3 856 aa29.19■■■□□ 2.26
Ssbp4-205ENSMUST00000210369 Sptbn5F6UCX4 1208 aa29.18■■■□□ 2.26
Ssbp4-205ENSMUST00000210369 Cct4P80315 539 aaKnown RBP29.18■■■□□ 2.26
Ssbp4-205ENSMUST00000210369 VgfQ0VGU4 617 aa29.17■■■□□ 2.26
Ssbp4-205ENSMUST00000210369 Ddx58Q6Q899 926 aa29.17■■■□□ 2.26
Ssbp4-205ENSMUST00000210369 Noc3lQ8VI84 807 aaKnown RBP29.15■■■□□ 2.26
Ssbp4-205ENSMUST00000210369 Tlr7P58681 1050 aa29.15■■■□□ 2.26
Ssbp4-205ENSMUST00000210369 Map3k13Q1HKZ5 959 aa29.14■■■□□ 2.26
Ssbp4-205ENSMUST00000210369 Ccnl1Q52KE7 532 aaKnown RBP29.14■■■□□ 2.26
Ssbp4-205ENSMUST00000210369 Mre11Q61216 706 aa29.14■■■□□ 2.26
Ssbp4-205ENSMUST00000210369 ApobrQ8VBT6 942 aa29.13■■■□□ 2.25
Ssbp4-205ENSMUST00000210369 Ttll7A4Q9F0 912 aa29.13■■■□□ 2.25
Ssbp4-205ENSMUST00000210369 Lmbr1lQ9D1E5 489 aa29.13■■■□□ 2.25
Ssbp4-205ENSMUST00000210369 Nav1Q8CH77 1875 aa29.12■■■□□ 2.25
Ssbp4-205ENSMUST00000210369 Slc4a10Q5DTL9 1118 aa29.12■■■□□ 2.25
Ssbp4-205ENSMUST00000210369 MypnQ5DTJ9 1315 aa29.12■■■□□ 2.25
Ssbp4-205ENSMUST00000210369 Ptpdc1Q6NZK8 747 aa29.11■■■□□ 2.25
Retrieved 100 of 22,080 RNA–protein pairs in 41.1 ms