RNA–Protein interactions for RNA: ENSMUST00000173347.7

Lig3-210, Transcript of DNA ligase 3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Lig3, Length 3,631 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-210ENSMUST00000173347 Nek4Q9Z1J2 792 aa13.4□□□□□ -0.26
Lig3-210ENSMUST00000173347 Tceal9Q9DD24 104 aa13.39□□□□□ -0.27
Lig3-210ENSMUST00000173347 Ybx3Q9JKB3 361 aaKnown RBP13.39□□□□□ -0.27
Lig3-210ENSMUST00000173347 HellsQ60848 821 aa13.39□□□□□ -0.27
Lig3-210ENSMUST00000173347 Prkab2Q6PAM0 271 aa13.39□□□□□ -0.27
Lig3-210ENSMUST00000173347 Ppp1r9bQ6R891 817 aaKnown RBP13.39□□□□□ -0.27
Lig3-210ENSMUST00000173347 PigbQ9JJQ0 542 aa13.39□□□□□ -0.27
Lig3-210ENSMUST00000173347 Ier5O89113 308 aa13.38□□□□□ -0.27
Lig3-210ENSMUST00000173347 Map3k13Q1HKZ5 959 aa13.38□□□□□ -0.27
Lig3-210ENSMUST00000173347 Hoxa7P02830 229 aa13.38□□□□□ -0.27
Lig3-210ENSMUST00000173347 Tbc1d9Q3UYK3 1264 aa13.38□□□□□ -0.27
Lig3-210ENSMUST00000173347 Lrrc59Q922Q8 307 aaKnown RBP13.38□□□□□ -0.27
Lig3-210ENSMUST00000173347 Bicc1Q99MQ1 977 aaKnown RBP13.38□□□□□ -0.27
Lig3-210ENSMUST00000173347 Mcmdc2E9Q956 681 aa13.37□□□□□ -0.27
Lig3-210ENSMUST00000173347 Mum1Q6DID5 682 aa13.37□□□□□ -0.27
Lig3-210ENSMUST00000173347 Elp1Q7TT37 1333 aaKnown RBP13.37□□□□□ -0.27
Lig3-210ENSMUST00000173347 ArxO35085 564 aa13.37□□□□□ -0.27
Lig3-210ENSMUST00000173347 Slc4a10Q5DTL9 1118 aa13.37□□□□□ -0.27
Lig3-210ENSMUST00000173347 CenppQ9CZ92 286 aa13.37□□□□□ -0.27
Lig3-210ENSMUST00000173347 AceP09470 1312 aa13.37□□□□□ -0.27
Lig3-210ENSMUST00000173347 Anapc15-psA0A140T8L6 141 aa13.36□□□□□ -0.27
Lig3-210ENSMUST00000173347 Sptbn5F6UCX4 1208 aa13.36□□□□□ -0.27
Lig3-210ENSMUST00000173347 Tom1O88746 492 aa13.36□□□□□ -0.27
Lig3-210ENSMUST00000173347 Ankle2Q6P1H6 964 aa13.35□□□□□ -0.27
Lig3-210ENSMUST00000173347 Zkscan2G3X952 960 aa13.35□□□□□ -0.27
Lig3-210ENSMUST00000173347 Grm8P47743 908 aa13.35□□□□□ -0.27
Lig3-210ENSMUST00000173347 Tlr7P58681 1050 aa13.35□□□□□ -0.27
Lig3-210ENSMUST00000173347 Slc39a6Q8C145 765 aa13.35□□□□□ -0.27
Lig3-210ENSMUST00000173347 Ints5Q8CHT3 1018 aa13.34□□□□□ -0.27
Lig3-210ENSMUST00000173347 Tnpo1Q8BFY9 898 aaKnown RBP13.34□□□□□ -0.27
Lig3-210ENSMUST00000173347 Ttll7A4Q9F0 912 aa13.33□□□□□ -0.27
Lig3-210ENSMUST00000173347 Qtrt2B8ZXI1 415 aa13.33□□□□□ -0.27
Lig3-210ENSMUST00000173347 ApobrQ8VBT6 942 aa13.33□□□□□ -0.27
Lig3-210ENSMUST00000173347 Bcar3Q9QZK2 820 aa13.33□□□□□ -0.27
Lig3-210ENSMUST00000173347 Kcnh4A2A5F7 1018 aa13.33□□□□□ -0.28
Lig3-210ENSMUST00000173347 Ccnl1Q52KE7 532 aaKnown RBP13.33□□□□□ -0.28
Lig3-210ENSMUST00000173347 Mre11Q61216 706 aa13.33□□□□□ -0.28
Lig3-210ENSMUST00000173347 Lmbr1lQ9D1E5 489 aa13.33□□□□□ -0.28
Lig3-210ENSMUST00000173347 Erbb4Q61527 1308 aa13.33□□□□□ -0.28
Lig3-210ENSMUST00000173347 Ptpdc1Q6NZK8 747 aa13.33□□□□□ -0.28
Lig3-210ENSMUST00000173347 Znf526Q8BI66 675 aa13.33□□□□□ -0.28
Lig3-210ENSMUST00000173347 Ppm1mQ8BU27 406 aa13.33□□□□□ -0.28
Lig3-210ENSMUST00000173347 GorabQ8BRM2 368 aa13.32□□□□□ -0.28
Lig3-210ENSMUST00000173347 Akap11E9Q777 1895 aa13.32□□□□□ -0.28
Lig3-210ENSMUST00000173347 Igfbp6P47880 238 aa13.32□□□□□ -0.28
Lig3-210ENSMUST00000173347 Cers3Q1A3B0 383 aa13.32□□□□□ -0.28
Lig3-210ENSMUST00000173347 Cct4P80315 539 aaKnown RBP13.32□□□□□ -0.28
Lig3-210ENSMUST00000173347 Q9D2X8 372 aa13.32□□□□□ -0.28
Lig3-210ENSMUST00000173347 Smg7Q5RJH6 1138 aaKnown RBP13.31□□□□□ -0.28
Lig3-210ENSMUST00000173347 Trim52Q8CDV4 233 aa13.31□□□□□ -0.28
Lig3-210ENSMUST00000173347 Ginm1Q91WR6 327 aa13.31□□□□□ -0.28
Lig3-210ENSMUST00000173347 VgfQ0VGU4 617 aa13.31□□□□□ -0.28
Lig3-210ENSMUST00000173347 Ddx58Q6Q899 926 aa13.31□□□□□ -0.28
Lig3-210ENSMUST00000173347 Bcl2l12Q9D3J3 255 aa13.31□□□□□ -0.28
Lig3-210ENSMUST00000173347 Tiam2Q6ZPF3 1715 aa13.31□□□□□ -0.28
Lig3-210ENSMUST00000173347 Pdia3P27773 505 aaKnown RBP13.3□□□□□ -0.28
Lig3-210ENSMUST00000173347 Tgfb1i1Q62219 461 aa13.3□□□□□ -0.28
Lig3-210ENSMUST00000173347 Tjp1P39447 1745 aaKnown RBP13.3□□□□□ -0.28
Lig3-210ENSMUST00000173347 Hmox1P14901 289 aa13.3□□□□□ -0.28
Lig3-210ENSMUST00000173347 Crb1Q8VHS2 1405 aa13.3□□□□□ -0.28
Lig3-210ENSMUST00000173347 Nucb1Q02819 459 aaKnown RBP13.3□□□□□ -0.28
Lig3-210ENSMUST00000173347 Sik1Q60670 779 aa13.3□□□□□ -0.28
Lig3-210ENSMUST00000173347 Ppp6r3Q922D4 844 aa13.3□□□□□ -0.28
Lig3-210ENSMUST00000173347 Gm10093D3YYI8 482 aa13.29□□□□□ -0.28
Lig3-210ENSMUST00000173347 Hdac1O09106 482 aaKnown RBP13.29□□□□□ -0.28
Lig3-210ENSMUST00000173347 Fkbp5Q64378 456 aa13.29□□□□□ -0.28
Lig3-210ENSMUST00000173347 Shank2Q80Z38 1476 aa13.29□□□□□ -0.28
Lig3-210ENSMUST00000173347 Exoc5Q3TPX4 708 aa13.29□□□□□ -0.28
Lig3-210ENSMUST00000173347 MypnQ5DTJ9 1315 aa13.29□□□□□ -0.28
Lig3-210ENSMUST00000173347 Ddx60E9PZQ1 1711 aa13.29□□□□□ -0.28
Lig3-210ENSMUST00000173347 Ggt6Q6PDE7 497 aa13.28□□□□□ -0.28
Lig3-210ENSMUST00000173347 Kif2cQ922S8 721 aa13.28□□□□□ -0.28
Lig3-210ENSMUST00000173347 Hspa2P17156 633 aa13.28□□□□□ -0.28
Lig3-210ENSMUST00000173347 Zbtb40Q6PCS8 1258 aa13.28□□□□□ -0.28
Lig3-210ENSMUST00000173347 Ppip5k2Q6ZQB6 1129 aa13.28□□□□□ -0.28
Lig3-210ENSMUST00000173347 Mylk2Q8VCR8 613 aa13.28□□□□□ -0.28
Lig3-210ENSMUST00000173347 Syde2E9PUP1 1314 aa13.28□□□□□ -0.28
Lig3-210ENSMUST00000173347 Soga3Q6NZL0 945 aa13.27□□□□□ -0.28
Lig3-210ENSMUST00000173347 Noc3lQ8VI84 807 aaKnown RBP13.27□□□□□ -0.28
Lig3-210ENSMUST00000173347 Abcc4E9Q236 1325 aa13.27□□□□□ -0.29
Lig3-210ENSMUST00000173347 Pm20d1Q8C165 503 aa13.27□□□□□ -0.29
Lig3-210ENSMUST00000173347 RestQ8VIG1 1082 aa13.27□□□□□ -0.29
Lig3-210ENSMUST00000173347 Tfip11Q9ERA6 838 aaKnown RBP13.27□□□□□ -0.29
Lig3-210ENSMUST00000173347 Mst1rQ62190 1378 aa13.26□□□□□ -0.29
Lig3-210ENSMUST00000173347 Pa2g4P50580 394 aaKnown RBP13.26□□□□□ -0.29
Lig3-210ENSMUST00000173347 Erc2Q6PH08 957 aa13.26□□□□□ -0.29
Lig3-210ENSMUST00000173347 PappaQ8R4K8 1624 aa13.26□□□□□ -0.29
Lig3-210ENSMUST00000173347 Hsp90b1P08113 802 aaKnown RBP13.26□□□□□ -0.29
Lig3-210ENSMUST00000173347 Ripor2Q80U16 1078 aa13.26□□□□□ -0.29
Lig3-210ENSMUST00000173347 Cap2Q9CYT6 476 aa13.26□□□□□ -0.29
Lig3-210ENSMUST00000173347 Gm12185Q5NCB2 835 aa13.26□□□□□ -0.29
Lig3-210ENSMUST00000173347 Slc5a4bQ91ZP4 660 aa13.26□□□□□ -0.29
Lig3-210ENSMUST00000173347 Hdac6Q9Z2V5 1149 aa13.26□□□□□ -0.29
Lig3-210ENSMUST00000173347 Tpx2A2APB8 745 aaKnown RBP13.25□□□□□ -0.29
Lig3-210ENSMUST00000173347 Zbtb3Q91X45 518 aa13.25□□□□□ -0.29
Lig3-210ENSMUST00000173347 Stard3nlQ9DCI3 235 aa13.25□□□□□ -0.29
Lig3-210ENSMUST00000173347 GpkowQ56A08 488 aa13.25□□□□□ -0.29
Lig3-210ENSMUST00000173347 Gnl3lQ6PGG6 577 aaKnown RBP13.25□□□□□ -0.29
Lig3-210ENSMUST00000173347 NmiO35309 314 aa13.25□□□□□ -0.29
Lig3-210ENSMUST00000173347 Gnat3Q3V3I2 354 aa13.25□□□□□ -0.29
Retrieved 100 of 22,080 RNA–protein pairs in 27.7 ms