RNA–Protein interactions for RNA: ENSMUST00000139560.7

Ndc1-204, Transcript of Nucleoporin NDC1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ndc1, Length 4,584 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1-204ENSMUST00000139560 Fam107bQ3TGF2 131 aa13.62□□□□□ -0.23
Ndc1-204ENSMUST00000139560 GpkowQ56A08 488 aa13.62□□□□□ -0.23
Ndc1-204ENSMUST00000139560 Caskin1Q6P9K8 1431 aa13.61□□□□□ -0.23
Ndc1-204ENSMUST00000139560 Chpf2Q3UU43 768 aa13.61□□□□□ -0.23
Ndc1-204ENSMUST00000139560 Tmem132eQ6IEE6 982 aa13.61□□□□□ -0.23
Ndc1-204ENSMUST00000139560 Tmc2Q8R4P4 888 aa13.61□□□□□ -0.23
Ndc1-204ENSMUST00000139560 Rufy2Q8R4C2 606 aa13.61□□□□□ -0.23
Ndc1-204ENSMUST00000139560 Pafah1b1P63005 410 aaKnown RBP13.61□□□□□ -0.23
Ndc1-204ENSMUST00000139560 Ccdc93Q7TQK5 629 aa13.61□□□□□ -0.23
Ndc1-204ENSMUST00000139560 Nucb2P81117 420 aa13.61□□□□□ -0.23
Ndc1-204ENSMUST00000139560 Kcnh5Q920E3 988 aa13.61□□□□□ -0.23
Ndc1-204ENSMUST00000139560 Ndufa8Q9DCJ5 172 aa13.6□□□□□ -0.23
Ndc1-204ENSMUST00000139560 Ncoa3O09000 1398 aa13.6□□□□□ -0.23
Ndc1-204ENSMUST00000139560 AcrbpQ3V140 540 aa13.6□□□□□ -0.23
Ndc1-204ENSMUST00000139560 Cep89Q9CZX2 791 aa13.6□□□□□ -0.23
Ndc1-204ENSMUST00000139560 IkQ9Z1M8 557 aaKnown RBP13.6□□□□□ -0.23
Ndc1-204ENSMUST00000139560 Slc5a1Q8C3K6 665 aa13.6□□□□□ -0.23
Ndc1-204ENSMUST00000139560 Tsr2Q8C8T8 191 aa13.6□□□□□ -0.23
Ndc1-204ENSMUST00000139560 Kdm2bQ6P1G2 1309 aa13.6□□□□□ -0.23
Ndc1-204ENSMUST00000139560 Aifm3Q3TY86 605 aa13.59□□□□□ -0.23
Ndc1-204ENSMUST00000139560 Jakmip3Q5DTN8 844 aa13.59□□□□□ -0.23
Ndc1-204ENSMUST00000139560 Cdc45Q9Z1X9 566 aa13.59□□□□□ -0.23
Ndc1-204ENSMUST00000139560 Pdcl2Q78Y63 240 aa13.59□□□□□ -0.23
Ndc1-204ENSMUST00000139560 Syt10Q9R0N4 523 aa13.59□□□□□ -0.23
Ndc1-204ENSMUST00000139560 Ces1hD3Z298 562 aa13.59□□□□□ -0.23
Ndc1-204ENSMUST00000139560 Ddx46Q569Z5 1032 aaKnown RBP13.59□□□□□ -0.23
Ndc1-204ENSMUST00000139560 Soga3Q6NZL0 945 aa13.59□□□□□ -0.23
Ndc1-204ENSMUST00000139560 Ankrd40Q5SUE8 363 aa13.58□□□□□ -0.23
Ndc1-204ENSMUST00000139560 Cep120Q7TSG1 988 aa13.58□□□□□ -0.23
Ndc1-204ENSMUST00000139560 Pa2g4P50580 394 aaKnown RBP13.58□□□□□ -0.24
Ndc1-204ENSMUST00000139560 Gsdma2Q32M21 443 aa13.58□□□□□ -0.24
Ndc1-204ENSMUST00000139560 MpndQ3TV65 487 aa13.58□□□□□ -0.24
Ndc1-204ENSMUST00000139560 Smc1bQ920F6 1248 aa13.58□□□□□ -0.24
Ndc1-204ENSMUST00000139560 Tex13c2A0A0G2JGA3 530 aa13.58□□□□□ -0.24
Ndc1-204ENSMUST00000139560 Kif3cO35066 796 aa13.58□□□□□ -0.24
Ndc1-204ENSMUST00000139560 Prim1P20664 417 aa13.58□□□□□ -0.24
Ndc1-204ENSMUST00000139560 Nucb1Q02819 459 aaKnown RBP13.58□□□□□ -0.24
Ndc1-204ENSMUST00000139560 Ddx19aQ61655 478 aaKnown RBP13.58□□□□□ -0.24
Ndc1-204ENSMUST00000139560 Ssr1Q9CY50 286 aaKnown RBP13.58□□□□□ -0.24
Ndc1-204ENSMUST00000139560 LlphQ9D945 130 aaKnown RBP13.58□□□□□ -0.24
Ndc1-204ENSMUST00000139560 Mlh3A0A1Y7VMP7 1443 aa13.58□□□□□ -0.24
Ndc1-204ENSMUST00000139560 Ptcd1Q8C2E4 695 aaKnown RBP13.57□□□□□ -0.24
Ndc1-204ENSMUST00000139560 Ccdc158Q8CDI6 1109 aa13.57□□□□□ -0.24
Ndc1-204ENSMUST00000139560 Fam114a1Q9D281 569 aa13.57□□□□□ -0.24
Ndc1-204ENSMUST00000139560 Gpatch8A2A6A1 1505 aa13.57□□□□□ -0.24
Ndc1-204ENSMUST00000139560 AidaQ8C4Q6 305 aa13.57□□□□□ -0.24
Ndc1-204ENSMUST00000139560 Rhot2Q8JZN7 620 aa13.57□□□□□ -0.24
Ndc1-204ENSMUST00000139560 Ccdc12Q8R344 166 aaKnown RBP13.57□□□□□ -0.24
Ndc1-204ENSMUST00000139560 Vps16Q920Q4 839 aa13.57□□□□□ -0.24
Ndc1-204ENSMUST00000139560 Ccdc94Q9D6J3 314 aa13.57□□□□□ -0.24
Ndc1-204ENSMUST00000139560 Zmym4A2A791 1549 aaKnown RBP13.57□□□□□ -0.24
Ndc1-204ENSMUST00000139560 OvosQ3UU35 1456 aa13.57□□□□□ -0.24
Ndc1-204ENSMUST00000139560 Hs1bp3Q3TC93 395 aa13.57□□□□□ -0.24
Ndc1-204ENSMUST00000139560 Zfp251Q6PCX8 632 aa13.57□□□□□ -0.24
Ndc1-204ENSMUST00000139560 Golim4Q8BXA1 655 aa13.57□□□□□ -0.24
Ndc1-204ENSMUST00000139560 Dnaaf4Q8R368 420 aa13.57□□□□□ -0.24
Ndc1-204ENSMUST00000139560 Gps2Q921N8 327 aa13.57□□□□□ -0.24
Ndc1-204ENSMUST00000139560 Dydc1Q9D9T0 175 aa13.57□□□□□ -0.24
Ndc1-204ENSMUST00000139560 Slx4Q6P1D7 1565 aa13.57□□□□□ -0.24
Ndc1-204ENSMUST00000139560 Sos1Q62245 1319 aa13.57□□□□□ -0.24
Ndc1-204ENSMUST00000139560 Gm156Q58A37 223 aa13.57□□□□□ -0.24
Ndc1-204ENSMUST00000139560 Trappc8E9PWG2 1437 aa13.56□□□□□ -0.24
Ndc1-204ENSMUST00000139560 Tmem94Q7TSH8 1360 aa13.56□□□□□ -0.24
Ndc1-204ENSMUST00000139560 Jakmip2D3YXK0 820 aa13.56□□□□□ -0.24
Ndc1-204ENSMUST00000139560 Bag3Q9JLV1 577 aaKnown RBP13.56□□□□□ -0.24
Ndc1-204ENSMUST00000139560 Frat1P70339 274 aa13.56□□□□□ -0.24
Ndc1-204ENSMUST00000139560 Map9Q3TRR0 646 aa13.56□□□□□ -0.24
Ndc1-204ENSMUST00000139560 Tex2Q6ZPJ0 1128 aaKnown RBP13.56□□□□□ -0.24
Ndc1-204ENSMUST00000139560 Nlrp3Q8R4B8 1033 aa13.56□□□□□ -0.24
Ndc1-204ENSMUST00000139560 NinlQ6ZQ12 1394 aa13.56□□□□□ -0.24
Ndc1-204ENSMUST00000139560 Tyro3P55144 880 aa13.56□□□□□ -0.24
Ndc1-204ENSMUST00000139560 Psmb7P70195 277 aa13.56□□□□□ -0.24
Ndc1-204ENSMUST00000139560 Cfap69Q8BH53 942 aa13.56□□□□□ -0.24
Ndc1-204ENSMUST00000139560 Tbc1d8Q9Z1A9 1134 aa13.56□□□□□ -0.24
Ndc1-204ENSMUST00000139560 Hap1O35668 628 aa13.56□□□□□ -0.24
Ndc1-204ENSMUST00000139560 Vps37cQ8R105 352 aa13.56□□□□□ -0.24
Ndc1-204ENSMUST00000139560 Ptgs1P22437 602 aa13.55□□□□□ -0.24
Ndc1-204ENSMUST00000139560 Limch1Q3UH68 1057 aa13.55□□□□□ -0.24
Ndc1-204ENSMUST00000139560 Grpel1Q99LP6 217 aa13.55□□□□□ -0.24
Ndc1-204ENSMUST00000139560 Klhl10Q9D5V2 608 aa13.55□□□□□ -0.24
Ndc1-204ENSMUST00000139560 Prm3Q62100 101 aa13.55□□□□□ -0.24
Ndc1-204ENSMUST00000139560 Phldb2Q8K1N2 1249 aa13.55□□□□□ -0.24
Ndc1-204ENSMUST00000139560 Lamc3Q9R0B6 1581 aa13.55□□□□□ -0.24
Ndc1-204ENSMUST00000139560 Cct4P80315 539 aaKnown RBP13.55□□□□□ -0.24
Ndc1-204ENSMUST00000139560 Fam177a1Q8BR63 207 aa13.55□□□□□ -0.24
Ndc1-204ENSMUST00000139560 Tmem132aQ922P8 1018 aa13.55□□□□□ -0.24
Ndc1-204ENSMUST00000139560 SfswapQ3USH5 945 aaKnown RBP13.54□□□□□ -0.24
Ndc1-204ENSMUST00000139560 Hspa4Q61316 841 aa13.54□□□□□ -0.24
Ndc1-204ENSMUST00000139560 Igsf3Q6ZQA6 1194 aa13.54□□□□□ -0.24
Ndc1-204ENSMUST00000139560 Idi2Q8BFZ6 227 aa13.54□□□□□ -0.24
Ndc1-204ENSMUST00000139560 Cep55Q8BT07 462 aa13.54□□□□□ -0.24
Ndc1-204ENSMUST00000139560 Igbp1bQ9QZ29 343 aa13.54□□□□□ -0.24
Ndc1-204ENSMUST00000139560 Dhx8A2A4P0 1244 aaKnown RBP13.54□□□□□ -0.24
Ndc1-204ENSMUST00000139560 Zscan20B2KFW1 1030 aa13.54□□□□□ -0.24
Ndc1-204ENSMUST00000139560 Igflr1Q3U4N7 345 aa13.54□□□□□ -0.24
Ndc1-204ENSMUST00000139560 Tspyl3Q3UYP3 334 aa13.54□□□□□ -0.24
Ndc1-204ENSMUST00000139560 Lrrcc1Q69ZB0 1026 aa13.54□□□□□ -0.24
Ndc1-204ENSMUST00000139560 ZgpatQ8VDM1 511 aa13.54□□□□□ -0.24
Ndc1-204ENSMUST00000139560 Erc1Q99MI1 1120 aa13.54□□□□□ -0.24
Ndc1-204ENSMUST00000139560 Rbm8a2A0A0N4SUH6 174 aa13.54□□□□□ -0.24
Retrieved 100 of 22,080 RNA–protein pairs in 237.6 ms