RNA–Protein interactions for RNA: ENSMUST00000116492.2

Ubp1-203, Transcript of Upstream-binding protein 1, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Ubp1, Length 2,111 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1-203ENSMUST00000116492 Evi5lH3BKQ3 813 aa29.31■■■□□ 2.28
Ubp1-203ENSMUST00000116492 Slc4a10Q5DTL9 1118 aa29.31■■■□□ 2.28
Ubp1-203ENSMUST00000116492 Map3k2Q61083 619 aa29.3■■■□□ 2.28
Ubp1-203ENSMUST00000116492 Dixdc1Q80Y83 711 aa29.3■■■□□ 2.28
Ubp1-203ENSMUST00000116492 Pdzd9Q9D9M4 266 aa29.3■■■□□ 2.28
Ubp1-203ENSMUST00000116492 HellsQ60848 821 aa29.29■■■□□ 2.28
Ubp1-203ENSMUST00000116492 OptnQ8K3K8 584 aa29.29■■■□□ 2.28
Ubp1-203ENSMUST00000116492 Dnttip2Q8R2M2 758 aaKnown RBP29.29■■■□□ 2.28
Ubp1-203ENSMUST00000116492 Vwa3bJ9JI28 736 aa29.29■■■□□ 2.28
Ubp1-203ENSMUST00000116492 Mum1Q6DID5 682 aa29.29■■■□□ 2.28
Ubp1-203ENSMUST00000116492 ThemisQ8BGW0 636 aa29.29■■■□□ 2.28
Ubp1-203ENSMUST00000116492 Irf9Q61179 399 aa29.28■■■□□ 2.28
Ubp1-203ENSMUST00000116492 Unc5clQ6R653 518 aa29.28■■■□□ 2.28
Ubp1-203ENSMUST00000116492 DekQ7TNV0 380 aaKnown RBP29.27■■■□□ 2.28
Ubp1-203ENSMUST00000116492 GnpatP98192 678 aa29.27■■■□□ 2.28
Ubp1-203ENSMUST00000116492 SympkQ80X82 1284 aa29.27■■■□□ 2.28
Ubp1-203ENSMUST00000116492 NexnQ7TPW1 607 aa29.26■■■□□ 2.27
Ubp1-203ENSMUST00000116492 Bcl2l13P59017 434 aa29.26■■■□□ 2.27
Ubp1-203ENSMUST00000116492 Col18a1P39061 1774 aa29.25■■■□□ 2.27
Ubp1-203ENSMUST00000116492 CrklP47941 303 aa29.25■■■□□ 2.27
Ubp1-203ENSMUST00000116492 Map3k13Q1HKZ5 959 aa29.25■■■□□ 2.27
Ubp1-203ENSMUST00000116492 Rasa1E9PYG6 1038 aa29.24■■■□□ 2.27
Ubp1-203ENSMUST00000116492 Atp6v1dP57746 247 aa29.24■■■□□ 2.27
Ubp1-203ENSMUST00000116492 Card10P58660 1021 aa29.24■■■□□ 2.27
Ubp1-203ENSMUST00000116492 Morc2aQ69ZX6 1030 aa29.24■■■□□ 2.27
Ubp1-203ENSMUST00000116492 Ccdc155Q80VJ8 648 aa29.24■■■□□ 2.27
Ubp1-203ENSMUST00000116492 Chmp7Q8R1T1 451 aa29.24■■■□□ 2.27
Ubp1-203ENSMUST00000116492 Smarce1O54941 411 aaKnown RBP29.23■■■□□ 2.27
Ubp1-203ENSMUST00000116492 Phkg2Q9DB30 406 aa29.23■■■□□ 2.27
Ubp1-203ENSMUST00000116492 Pmfbp1Q9WVQ0 1022 aa29.23■■■□□ 2.27
Ubp1-203ENSMUST00000116492 Gm21698A0A087WQP8 267 aa29.23■■■□□ 2.27
Ubp1-203ENSMUST00000116492 Gm21671G3UY31 267 aa29.23■■■□□ 2.27
Ubp1-203ENSMUST00000116492 Tgfb1i1Q62219 461 aa29.23■■■□□ 2.27
Ubp1-203ENSMUST00000116492 Phf14Q9D4H9 881 aa29.23■■■□□ 2.27
Ubp1-203ENSMUST00000116492 Abcc4E9Q236 1325 aa29.23■■■□□ 2.27
Ubp1-203ENSMUST00000116492 Tns2Q8CGB6 1400 aa29.21■■■□□ 2.27
Ubp1-203ENSMUST00000116492 Atf3Q60765 181 aa29.21■■■□□ 2.27
Ubp1-203ENSMUST00000116492 Filip1lQ6P6L0 1131 aa29.21■■■□□ 2.27
Ubp1-203ENSMUST00000116492 Ms4a2P20490 235 aa29.2■■■□□ 2.26
Ubp1-203ENSMUST00000116492 VgfQ0VGU4 617 aa29.2■■■□□ 2.26
Ubp1-203ENSMUST00000116492 Iqsec3Q3TES0 1195 aa29.2■■■□□ 2.26
Ubp1-203ENSMUST00000116492 Zdhhc9P59268 364 aa29.19■■■□□ 2.26
Ubp1-203ENSMUST00000116492 Pde3bQ61409 1100 aa29.19■■■□□ 2.26
Ubp1-203ENSMUST00000116492 Jakmip1Q8BVL9 626 aa29.18■■■□□ 2.26
Ubp1-203ENSMUST00000116492 Pdia6Q922R8 440 aaKnown RBP29.18■■■□□ 2.26
Ubp1-203ENSMUST00000116492 Tnks1bp1P58871 1720 aa29.18■■■□□ 2.26
Ubp1-203ENSMUST00000116492 Grm8P47743 908 aa29.18■■■□□ 2.26
Ubp1-203ENSMUST00000116492 Phactr2B1AVP0 632 aa29.17■■■□□ 2.26
Ubp1-203ENSMUST00000116492 Brpf1B2RRD7 1212 aa29.17■■■□□ 2.26
Ubp1-203ENSMUST00000116492 Il4rP16382 810 aa29.17■■■□□ 2.26
Ubp1-203ENSMUST00000116492 KinQ8K339 391 aa29.17■■■□□ 2.26
Ubp1-203ENSMUST00000116492 Rad50P70388 1312 aa29.17■■■□□ 2.26
Ubp1-203ENSMUST00000116492 Tmx3Q8BXZ1 456 aa29.17■■■□□ 2.26
Ubp1-203ENSMUST00000116492 Ccdc7Q9D541 371 aa29.17■■■□□ 2.26
Ubp1-203ENSMUST00000116492 ImpactO55091 318 aa29.16■■■□□ 2.26
Ubp1-203ENSMUST00000116492 EvcP57680 1005 aa29.15■■■□□ 2.26
Ubp1-203ENSMUST00000116492 Tshz3Q8CGV9 1081 aa29.15■■■□□ 2.26
Ubp1-203ENSMUST00000116492 Bicc1Q99MQ1 977 aaKnown RBP29.15■■■□□ 2.26
Ubp1-203ENSMUST00000116492 Kif20aP97329 887 aa29.15■■■□□ 2.26
Ubp1-203ENSMUST00000116492 Zranb3Q6NZP1 1069 aa29.15■■■□□ 2.26
Ubp1-203ENSMUST00000116492 Gdpd2Q9ESM6 539 aa29.15■■■□□ 2.26
Ubp1-203ENSMUST00000116492 Kiaa0232Q80U59 1396 aaKnown RBP29.15■■■□□ 2.26
Ubp1-203ENSMUST00000116492 Utp18Q5SSI6 552 aaKnown RBP29.14■■■□□ 2.26
Ubp1-203ENSMUST00000116492 TefQ9JLC6 301 aa29.14■■■□□ 2.26
Ubp1-203ENSMUST00000116492 Ppm1mQ8BU27 406 aa29.14■■■□□ 2.25
Ubp1-203ENSMUST00000116492 Brf1Q8CFK2 676 aa29.14■■■□□ 2.25
Ubp1-203ENSMUST00000116492 Strn4P58404 760 aa29.13■■■□□ 2.25
Ubp1-203ENSMUST00000116492 St18Q80TY4 1045 aa29.13■■■□□ 2.25
Ubp1-203ENSMUST00000116492 Zbtb3Q91X45 518 aa29.13■■■□□ 2.25
Ubp1-203ENSMUST00000116492 Stk3Q9JI10 497 aa29.13■■■□□ 2.25
Ubp1-203ENSMUST00000116492 Gm45015A0A140LII9 184 aa29.12■■■□□ 2.25
Ubp1-203ENSMUST00000116492 Gm18336A0A140LIU8 765 aa29.12■■■□□ 2.25
Ubp1-203ENSMUST00000116492 Taf5lQ91WQ5 589 aa29.12■■■□□ 2.25
Ubp1-203ENSMUST00000116492 Pa2g4P50580 394 aaKnown RBP29.12■■■□□ 2.25
Ubp1-203ENSMUST00000116492 Fam228bQ497Q6 232 aa29.12■■■□□ 2.25
Ubp1-203ENSMUST00000116492 Pdzrn3Q69ZS0 1063 aa29.12■■■□□ 2.25
Ubp1-203ENSMUST00000116492 FocadA2AKG8 1798 aa29.12■■■□□ 2.25
Ubp1-203ENSMUST00000116492 Ubr2Q6WKZ8 1755 aa29.12■■■□□ 2.25
Ubp1-203ENSMUST00000116492 AU015836B2RUM3 263 aa29.11■■■□□ 2.25
Ubp1-203ENSMUST00000116492 Ddx19aQ61655 478 aaKnown RBP29.11■■■□□ 2.25
Ubp1-203ENSMUST00000116492 Ints3Q7TPD0 1041 aaKnown RBP29.11■■■□□ 2.25
Ubp1-203ENSMUST00000116492 Slit1Q80TR4 1531 aa29.1■■■□□ 2.25
Ubp1-203ENSMUST00000116492 4930572O03RikQ8C5Y0 211 aa29.1■■■□□ 2.25
Ubp1-203ENSMUST00000116492 Lmbr1lQ9D1E5 489 aa29.1■■■□□ 2.25
Ubp1-203ENSMUST00000116492 Ppfia1B2RXQ2 1266 aa29.09■■■□□ 2.25
Ubp1-203ENSMUST00000116492 Ddx17Q501J6 650 aaKnown RBP29.09■■■□□ 2.25
Ubp1-203ENSMUST00000116492 Ddx60E9PZQ1 1711 aa29.09■■■□□ 2.25
Ubp1-203ENSMUST00000116492 Ssfa2Q922B9 1252 aa29.09■■■□□ 2.25
Ubp1-203ENSMUST00000116492 Mlh1Q9JK91 760 aa29.09■■■□□ 2.25
Ubp1-203ENSMUST00000116492 Bcl9lQ67FY2 1494 aa29.08■■■□□ 2.25
Ubp1-203ENSMUST00000116492 Shank2Q80Z38 1476 aa29.08■■■□□ 2.25
Ubp1-203ENSMUST00000116492 Cnnm1Q0GA42 951 aa29.07■■■□□ 2.24
Ubp1-203ENSMUST00000116492 Tjp1P39447 1745 aaKnown RBP29.07■■■□□ 2.24
Ubp1-203ENSMUST00000116492 Asic4Q7TNS7 539 aa29.06■■■□□ 2.24
Ubp1-203ENSMUST00000116492 Top1mtQ8R4U6 593 aa29.06■■■□□ 2.24
Ubp1-203ENSMUST00000116492 Rapgef3Q8VCC8 918 aa29.06■■■□□ 2.24
Ubp1-203ENSMUST00000116492 Sf3a1Q8K4Z5 791 aaKnown RBP29.06■■■□□ 2.24
Ubp1-203ENSMUST00000116492 Slx4ipQ9D7Y9 413 aa29.06■■■□□ 2.24
Ubp1-203ENSMUST00000116492 Fam50bQ9WTJ8 334 aa29.05■■■□□ 2.24
Ubp1-203ENSMUST00000116492 Igfbp6P47880 238 aa29.05■■■□□ 2.24
Retrieved 100 of 22,080 RNA–protein pairs in 77.5 ms