RNA–Protein interactions for RNA: ENSMUST00000111044.2

Bdnf-204, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,854 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-204ENSMUST00000111044 Exosc9Q9JHI7 438 aaKnown RBP8.84□□□□□ -0.99
Bdnf-204ENSMUST00000111044 Chaf1aQ9QWF0 911 aa8.84□□□□□ -0.99
Bdnf-204ENSMUST00000111044 Sytl4Q9R0Q1 673 aa8.84□□□□□ -0.99
Bdnf-204ENSMUST00000111044 Pnpla2Q8BJ56 486 aa8.84□□□□□ -0.99
Bdnf-204ENSMUST00000111044 Nlrp3Q8R4B8 1033 aa8.84□□□□□ -0.99
Bdnf-204ENSMUST00000111044 EcsitQ9QZH6 435 aa8.84□□□□□ -0.99
Bdnf-204ENSMUST00000111044 Mtx1P47802 317 aa8.84□□□□□ -0.99
Bdnf-204ENSMUST00000111044 Frat1P70339 274 aa8.84□□□□□ -0.99
Bdnf-204ENSMUST00000111044 Cdc37l1Q9CZP7 335 aa8.84□□□□□ -0.99
Bdnf-204ENSMUST00000111044 Ktn1Q61595 1327 aaKnown RBP8.84□□□□□ -0.99
Bdnf-204ENSMUST00000111044 Brpf3B2KF05 1204 aaKnown RBP8.83□□□□□ -1
Bdnf-204ENSMUST00000111044 Mctp1E9PV86 951 aa8.83□□□□□ -1
Bdnf-204ENSMUST00000111044 Jakmip2D3YXK0 820 aa8.83□□□□□ -1
Bdnf-204ENSMUST00000111044 Slu7Q8BHJ9 585 aa8.83□□□□□ -1
Bdnf-204ENSMUST00000111044 Ubxn4Q8VCH8 506 aa8.83□□□□□ -1
Bdnf-204ENSMUST00000111044 Bicd2Q921C5 820 aa8.83□□□□□ -1
Bdnf-204ENSMUST00000111044 Dhx8A2A4P0 1244 aaKnown RBP8.83□□□□□ -1
Bdnf-204ENSMUST00000111044 Zranb1Q7M760 708 aa8.83□□□□□ -1
Bdnf-204ENSMUST00000111044 Shq1Q7TMX5 569 aa8.83□□□□□ -1
Bdnf-204ENSMUST00000111044 Adck5Q80V03 582 aa8.83□□□□□ -1
Bdnf-204ENSMUST00000111044 Snw1Q9CSN1 536 aaKnown RBP8.83□□□□□ -1
Bdnf-204ENSMUST00000111044 Add3Q9QYB5 706 aaKnown RBP8.83□□□□□ -1
Bdnf-204ENSMUST00000111044 Hmox1P14901 289 aa8.82□□□□□ -1
Bdnf-204ENSMUST00000111044 Trak2Q6P9N8 913 aa8.82□□□□□ -1
Bdnf-204ENSMUST00000111044 Jakmip1Q8BVL9 626 aa8.82□□□□□ -1
Bdnf-204ENSMUST00000111044 Ccz1Q8C1Y8 480 aa8.82□□□□□ -1
Bdnf-204ENSMUST00000111044 Spata32Q8C5V0 334 aa8.82□□□□□ -1
Bdnf-204ENSMUST00000111044 Smarca5Q91ZW3 1051 aaKnown RBP8.82□□□□□ -1
Bdnf-204ENSMUST00000111044 DonsonQ9QXP4 560 aa8.82□□□□□ -1
Bdnf-204ENSMUST00000111044 Med14A2ABV5 1459 aaKnown RBP8.82□□□□□ -1
Bdnf-204ENSMUST00000111044 Rtel1Q0VGM9 1203 aa8.82□□□□□ -1
Bdnf-204ENSMUST00000111044 Def6Q8C2K1 630 aa8.82□□□□□ -1
Bdnf-204ENSMUST00000111044 Myo1cQ9WTI7 1063 aa8.82□□□□□ -1
Bdnf-204ENSMUST00000111044 Iqgap3F8VQ29 1632 aa8.82□□□□□ -1
Bdnf-204ENSMUST00000111044 Ice2Q3UZ18 988 aaKnown RBP8.82□□□□□ -1
Bdnf-204ENSMUST00000111044 Usp48Q3V0C5 1052 aa8.82□□□□□ -1
Bdnf-204ENSMUST00000111044 Fam13aQ8BGI4 693 aa8.82□□□□□ -1
Bdnf-204ENSMUST00000111044 Tubb4aQ9D6F9 444 aa8.82□□□□□ -1
Bdnf-204ENSMUST00000111044 Zbtb22Q9Z0G7 638 aa8.82□□□□□ -1
Bdnf-204ENSMUST00000111044 Fndc1E9Q043 1732 aa8.82□□□□□ -1
Bdnf-204ENSMUST00000111044 Hoxa7P02830 229 aa8.81□□□□□ -1
Bdnf-204ENSMUST00000111044 Babam1Q3UI43 333 aa8.81□□□□□ -1
Bdnf-204ENSMUST00000111044 Q8BT18 775 aa8.81□□□□□ -1
Bdnf-204ENSMUST00000111044 Rsph4aQ8BYM7 716 aa8.81□□□□□ -1
Bdnf-204ENSMUST00000111044 Naa30Q8CES0 364 aa8.81□□□□□ -1
Bdnf-204ENSMUST00000111044 Adgrl1Q80TR1 1466 aa8.81□□□□□ -1
Bdnf-204ENSMUST00000111044 Cnnm3Q32NY4 713 aa8.81□□□□□ -1
Bdnf-204ENSMUST00000111044 Kiaa1211Q5PR69 1207 aa8.81□□□□□ -1
Bdnf-204ENSMUST00000111044 Utp18Q5SSI6 552 aaKnown RBP8.81□□□□□ -1
Bdnf-204ENSMUST00000111044 Aldh1l2Q8K009 923 aa8.81□□□□□ -1
Bdnf-204ENSMUST00000111044 Dpf1Q9QX66 387 aa8.81□□□□□ -1
Bdnf-204ENSMUST00000111044 Spata31d1bE9QA57 1361 aa8.81□□□□□ -1
Bdnf-204ENSMUST00000111044 Pik3r4Q8VD65 1358 aa8.81□□□□□ -1
Bdnf-204ENSMUST00000111044 Ttc37F8VPK0 1563 aa8.81□□□□□ -1
Bdnf-204ENSMUST00000111044 Rims1Q99NE5 1463 aa8.81□□□□□ -1
Bdnf-204ENSMUST00000111044 CrebrfQ8CDG5 640 aaKnown RBP8.81□□□□□ -1
Bdnf-204ENSMUST00000111044 OptnQ8K3K8 584 aa8.81□□□□□ -1
Bdnf-204ENSMUST00000111044 SetQ9EQU5 289 aaKnown RBP8.81□□□□□ -1
Bdnf-204ENSMUST00000111044 Elf2Q9JHC9 593 aa8.81□□□□□ -1
Bdnf-204ENSMUST00000111044 Cep152A2AUM9 1736 aaKnown RBP8.81□□□□□ -1
Bdnf-204ENSMUST00000111044 Prex1Q69ZK0 1650 aa8.81□□□□□ -1
Bdnf-204ENSMUST00000111044 Ccdc121E9Q6D3 323 aa8.8□□□□□ -1
Bdnf-204ENSMUST00000111044 Uri1Q3TLD5 531 aa8.8□□□□□ -1
Bdnf-204ENSMUST00000111044 Fchsd2Q3USJ8 740 aa8.8□□□□□ -1
Bdnf-204ENSMUST00000111044 TfrcQ62351 763 aaKnown RBP8.8□□□□□ -1
Bdnf-204ENSMUST00000111044 Zpr1Q62384 459 aa8.8□□□□□ -1
Bdnf-204ENSMUST00000111044 Wdr24Q8CFJ9 790 aa8.8□□□□□ -1
Bdnf-204ENSMUST00000111044 Bmp2kQ91Z96 1138 aa8.8□□□□□ -1
Bdnf-204ENSMUST00000111044 Ssr1Q9CY50 286 aaKnown RBP8.8□□□□□ -1
Bdnf-204ENSMUST00000111044 Hecw2Q6I6G8 1578 aa8.8□□□□□ -1
Bdnf-204ENSMUST00000111044 Lcmt1A0A0U1RNF2 332 aa8.8□□□□□ -1
Bdnf-204ENSMUST00000111044 Btn2a2A4QPC6 514 aa8.8□□□□□ -1
Bdnf-204ENSMUST00000111044 Mcm6P97311 821 aa8.8□□□□□ -1
Bdnf-204ENSMUST00000111044 GscQ02591 256 aa8.8□□□□□ -1
Bdnf-204ENSMUST00000111044 Cavin2Q63918 418 aaKnown RBP8.8□□□□□ -1
Bdnf-204ENSMUST00000111044 Mum1Q6DID5 682 aa8.8□□□□□ -1
Bdnf-204ENSMUST00000111044 Afap1Q80YS6 731 aa8.8□□□□□ -1
Bdnf-204ENSMUST00000111044 Ccdc38Q8CDN8 563 aa8.8□□□□□ -1
Bdnf-204ENSMUST00000111044 Nrbp1Q99J45 535 aa8.8□□□□□ -1
Bdnf-204ENSMUST00000111044 Ap3b2Q9JME5 1082 aa8.8□□□□□ -1
Bdnf-204ENSMUST00000111044 Trpm1Q2TV84 1622 aa8.8□□□□□ -1
Bdnf-204ENSMUST00000111044 Ranbp1P34022 203 aaKnown RBP8.8□□□□□ -1
Bdnf-204ENSMUST00000111044 Bach1P97302 739 aa8.8□□□□□ -1
Bdnf-204ENSMUST00000111044 Fam53cQ8BXQ8 393 aa8.8□□□□□ -1
Bdnf-204ENSMUST00000111044 Pof1bQ8K4L4 587 aa8.8□□□□□ -1
Bdnf-204ENSMUST00000111044 Slc52a2Q9D8F3 450 aa8.8□□□□□ -1
Bdnf-204ENSMUST00000111044 Irx5Q9JKQ4 484 aa8.8□□□□□ -1
Bdnf-204ENSMUST00000111044 P2rx7Q9Z1M0 595 aa8.8□□□□□ -1
Bdnf-204ENSMUST00000111044 Sos1Q62245 1319 aa8.8□□□□□ -1
Bdnf-204ENSMUST00000111044 Q4VA45 678 aa8.8□□□□□ -1
Bdnf-204ENSMUST00000111044 Pdzrn3Q69ZS0 1063 aa8.8□□□□□ -1
Bdnf-204ENSMUST00000111044 Tmco3Q8BH01 678 aa8.8□□□□□ -1
Bdnf-204ENSMUST00000111044 LarsQ8BMJ2 1178 aa8.8□□□□□ -1
Bdnf-204ENSMUST00000111044 Q9D9H8 365 aa8.8□□□□□ -1
Bdnf-204ENSMUST00000111044 Atp10aO54827 1508 aa8.79□□□□□ -1
Bdnf-204ENSMUST00000111044 Gm42641I6L9G2 585 aa8.79□□□□□ -1
Bdnf-204ENSMUST00000111044 EappQ5BU09 281 aa8.79□□□□□ -1
Bdnf-204ENSMUST00000111044 Ptpdc1Q6NZK8 747 aa8.79□□□□□ -1
Bdnf-204ENSMUST00000111044 AtripQ8BMG1 785 aa8.79□□□□□ -1
Bdnf-204ENSMUST00000111044 Usp16Q99LG0 825 aa8.79□□□□□ -1
Retrieved 100 of 22,080 RNA–protein pairs in 25.4 ms