RNA–Protein interactions for RNA: ENSMUST00000035661.6

Cspg4-201, Transcript of Chondroitin sulfate proteoglycan 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cspg4, Length 8,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4-201ENSMUST00000035661 Pdcl2Q78Y63 240 aa11.5□□□□□ -0.57
Cspg4-201ENSMUST00000035661 Knl1Q66JQ7 1612 aa11.49□□□□□ -0.57
Cspg4-201ENSMUST00000035661 Uspl1Q3ULM6 1089 aa11.49□□□□□ -0.57
Cspg4-201ENSMUST00000035661 Exoc6bA6H5Z3 810 aa11.49□□□□□ -0.57
Cspg4-201ENSMUST00000035661 Itsn2Q9Z0R6 1659 aa11.49□□□□□ -0.57
Cspg4-201ENSMUST00000035661 Trim30cD3YVI9 513 aa11.49□□□□□ -0.57
Cspg4-201ENSMUST00000035661 Ncbp1Q3UYV9 790 aaKnown RBP11.49□□□□□ -0.57
Cspg4-201ENSMUST00000035661 PogkQ80TC5 607 aa11.49□□□□□ -0.57
Cspg4-201ENSMUST00000035661 Erlin1Q91X78 346 aa11.49□□□□□ -0.57
Cspg4-201ENSMUST00000035661 Cavin2Q63918 418 aaKnown RBP11.49□□□□□ -0.57
Cspg4-201ENSMUST00000035661 Rnf214Q8BFU3 668 aaKnown RBP11.49□□□□□ -0.57
Cspg4-201ENSMUST00000035661 Rims1Q99NE5 1463 aa11.49□□□□□ -0.57
Cspg4-201ENSMUST00000035661 AatkQ80YE4 1365 aa11.49□□□□□ -0.57
Cspg4-201ENSMUST00000035661 Kdm3aQ6PCM1 1323 aa11.48□□□□□ -0.57
Cspg4-201ENSMUST00000035661 Abcc3B2RX12 1523 aa11.48□□□□□ -0.57
Cspg4-201ENSMUST00000035661 Clasp1Q80TV8 1535 aaKnown RBP11.48□□□□□ -0.57
Cspg4-201ENSMUST00000035661 Pde4bB1AWC9 736 aa11.48□□□□□ -0.57
Cspg4-201ENSMUST00000035661 Gtf3c5Q8R2T8 520 aa11.48□□□□□ -0.57
Cspg4-201ENSMUST00000035661 Q9D9S1 216 aa11.48□□□□□ -0.57
Cspg4-201ENSMUST00000035661 Stk3Q9JI10 497 aa11.48□□□□□ -0.57
Cspg4-201ENSMUST00000035661 Ccdc191J3QQ27 883 aa11.48□□□□□ -0.57
Cspg4-201ENSMUST00000035661 Wdhd1P59328 1117 aa11.48□□□□□ -0.57
Cspg4-201ENSMUST00000035661 Ttc19Q8CC21 365 aa11.48□□□□□ -0.57
Cspg4-201ENSMUST00000035661 GlmnQ8BZM1 596 aa11.48□□□□□ -0.57
Cspg4-201ENSMUST00000035661 Dot1lQ6XZL8 1540 aa11.47□□□□□ -0.57
Cspg4-201ENSMUST00000035661 Ppfibp2O35711 882 aa11.47□□□□□ -0.57
Cspg4-201ENSMUST00000035661 Map2k1P31938 393 aa11.47□□□□□ -0.57
Cspg4-201ENSMUST00000035661 Agtpbp1Q641K1 1218 aa11.47□□□□□ -0.57
Cspg4-201ENSMUST00000035661 Cfap53Q9D439 514 aa11.47□□□□□ -0.57
Cspg4-201ENSMUST00000035661 Gm42641I6L9G2 585 aa11.47□□□□□ -0.57
Cspg4-201ENSMUST00000035661 AtripQ8BMG1 785 aa11.47□□□□□ -0.57
Cspg4-201ENSMUST00000035661 Arhgef18Q6P9R4 1021 aa11.47□□□□□ -0.57
Cspg4-201ENSMUST00000035661 Ift57Q8BXG3 429 aa11.47□□□□□ -0.57
Cspg4-201ENSMUST00000035661 Amotl1Q9D4H4 968 aa11.47□□□□□ -0.57
Cspg4-201ENSMUST00000035661 Dzip1Q8BMD2 852 aa11.47□□□□□ -0.57
Cspg4-201ENSMUST00000035661 CenpqQ9CPQ5 267 aa11.47□□□□□ -0.57
Cspg4-201ENSMUST00000035661 Atxn3Q9CVD2 355 aa11.47□□□□□ -0.57
Cspg4-201ENSMUST00000035661 Tom1O88746 492 aa11.47□□□□□ -0.57
Cspg4-201ENSMUST00000035661 L3mbtl2P59178 703 aa11.46□□□□□ -0.57
Cspg4-201ENSMUST00000035661 Washc4Q3UMB9 1173 aa11.46□□□□□ -0.57
Cspg4-201ENSMUST00000035661 Ankle2Q6P1H6 964 aa11.46□□□□□ -0.57
Cspg4-201ENSMUST00000035661 Cep131Q62036 1060 aa11.46□□□□□ -0.57
Cspg4-201ENSMUST00000035661 Klc3Q91W40 508 aa11.46□□□□□ -0.57
Cspg4-201ENSMUST00000035661 Zfyve16Q80U44 1528 aa11.46□□□□□ -0.57
Cspg4-201ENSMUST00000035661 Usp48Q3V0C5 1052 aa11.46□□□□□ -0.57
Cspg4-201ENSMUST00000035661 Ca8P28651 291 aa11.46□□□□□ -0.58
Cspg4-201ENSMUST00000035661 Fam107bQ3TGF2 131 aa11.46□□□□□ -0.58
Cspg4-201ENSMUST00000035661 Krt84Q99M73 603 aa11.45□□□□□ -0.58
Cspg4-201ENSMUST00000035661 Echdc1Q9D9V3 322 aa11.45□□□□□ -0.58
Cspg4-201ENSMUST00000035661 TnmdQ9EP64 317 aa11.45□□□□□ -0.58
Cspg4-201ENSMUST00000035661 CenphQ9QYM8 241 aa11.45□□□□□ -0.58
Cspg4-201ENSMUST00000035661 Gm16486A0A1D5RMD1 1434 aa11.45□□□□□ -0.58
Cspg4-201ENSMUST00000035661 Ctr9Q62018 1173 aaKnown RBP11.45□□□□□ -0.58
Cspg4-201ENSMUST00000035661 Slc13a4Q8BZ82 625 aa11.45□□□□□ -0.58
Cspg4-201ENSMUST00000035661 Cdc42bpbQ7TT50 1713 aa11.45□□□□□ -0.58
Cspg4-201ENSMUST00000035661 Irf9Q61179 399 aa11.45□□□□□ -0.58
Cspg4-201ENSMUST00000035661 Rnf187Q8BFX1 236 aa11.45□□□□□ -0.58
Cspg4-201ENSMUST00000035661 NgdnQ9DB96 315 aaKnown RBP11.45□□□□□ -0.58
Cspg4-201ENSMUST00000035661 Prkar2bP31324 416 aa11.45□□□□□ -0.58
Cspg4-201ENSMUST00000035661 Cdkl5Q3UTQ8 938 aa11.45□□□□□ -0.58
Cspg4-201ENSMUST00000035661 Tmem87bQ8BKU8 555 aa11.45□□□□□ -0.58
Cspg4-201ENSMUST00000035661 Cog6Q8R3I3 657 aa11.45□□□□□ -0.58
Cspg4-201ENSMUST00000035661 Fam135bQ9DAI6 1403 aa11.45□□□□□ -0.58
Cspg4-201ENSMUST00000035661 Clul1Q3ZRW6 464 aa11.44□□□□□ -0.58
Cspg4-201ENSMUST00000035661 4921530L21RikQ9CQ47 274 aa11.44□□□□□ -0.58
Cspg4-201ENSMUST00000035661 Sept11Q8C1B7 431 aaKnown RBP11.44□□□□□ -0.58
Cspg4-201ENSMUST00000035661 DmtnQ9WV69 405 aa11.44□□□□□ -0.58
Cspg4-201ENSMUST00000035661 Cdc42bpgQ80UW5 1551 aa11.44□□□□□ -0.58
Cspg4-201ENSMUST00000035661 Exoc5Q3TPX4 708 aa11.44□□□□□ -0.58
Cspg4-201ENSMUST00000035661 Znf608Q56A10 1511 aa11.44□□□□□ -0.58
Cspg4-201ENSMUST00000035661 Nos1Q9Z0J4 1429 aa11.44□□□□□ -0.58
Cspg4-201ENSMUST00000035661 Nf2P46662 596 aa11.44□□□□□ -0.58
Cspg4-201ENSMUST00000035661 Gm32742A0A1B0GT42 1604 aa11.44□□□□□ -0.58
Cspg4-201ENSMUST00000035661 Ankib1Q6ZPS6 1085 aa11.44□□□□□ -0.58
Cspg4-201ENSMUST00000035661 Trpm2Q91YD4 1506 aa11.44□□□□□ -0.58
Cspg4-201ENSMUST00000035661 Ccdc112A0AUP1 442 aa11.44□□□□□ -0.58
Cspg4-201ENSMUST00000035661 Gm44503E9PYU5 387 aa11.44□□□□□ -0.58
Cspg4-201ENSMUST00000035661 Emilin2Q8K482 1074 aa11.44□□□□□ -0.58
Cspg4-201ENSMUST00000035661 Map3k13Q1HKZ5 959 aa11.44□□□□□ -0.58
Cspg4-201ENSMUST00000035661 Smc5Q8CG46 1101 aaKnown RBP11.44□□□□□ -0.58
Cspg4-201ENSMUST00000035661 Smc1bQ920F6 1248 aa11.44□□□□□ -0.58
Cspg4-201ENSMUST00000035661 Anapc15-psA0A140T8L6 141 aa11.43□□□□□ -0.58
Cspg4-201ENSMUST00000035661 Mipol1Q9D9F8 279 aa11.43□□□□□ -0.58
Cspg4-201ENSMUST00000035661 Ptpdc1Q6NZK8 747 aa11.43□□□□□ -0.58
Cspg4-201ENSMUST00000035661 Cadps2Q8BYR5 1297 aa11.43□□□□□ -0.58
Cspg4-201ENSMUST00000035661 Myom2Q14BI5 1463 aa11.43□□□□□ -0.58
Cspg4-201ENSMUST00000035661 Gm18336A0A140LIU8 765 aa11.43□□□□□ -0.58
Cspg4-201ENSMUST00000035661 Nol8Q3UHX0 1147 aaKnown RBP11.43□□□□□ -0.58
Cspg4-201ENSMUST00000035661 Rbm19Q8R3C6 952 aaKnown RBP11.43□□□□□ -0.58
Cspg4-201ENSMUST00000035661 SrrtQ99MR6 875 aaKnown RBP11.43□□□□□ -0.58
Cspg4-201ENSMUST00000035661 Abcd1P48410 736 aa11.43□□□□□ -0.58
Cspg4-201ENSMUST00000035661 Cfap45Q9D9U9 551 aa11.43□□□□□ -0.58
Cspg4-201ENSMUST00000035661 Kcnh8P59111 1102 aa11.42□□□□□ -0.58
Cspg4-201ENSMUST00000035661 Tnpo1Q8BFY9 898 aaKnown RBP11.42□□□□□ -0.58
Cspg4-201ENSMUST00000035661 Cfap58B2RW38 873 aa11.42□□□□□ -0.58
Cspg4-201ENSMUST00000035661 ImmtQ8CAQ8 757 aaKnown RBP11.42□□□□□ -0.58
Cspg4-201ENSMUST00000035661 Znf692Q3U381 531 aa11.42□□□□□ -0.58
Cspg4-201ENSMUST00000035661 Arhgap23Q69ZH9 1483 aa11.42□□□□□ -0.58
Cspg4-201ENSMUST00000035661 Paxip1Q6NZQ4 1056 aa11.42□□□□□ -0.58
Cspg4-201ENSMUST00000035661 Pafah1b1P63005 410 aaKnown RBP11.42□□□□□ -0.58
Retrieved 100 of 22,080 RNA–protein pairs in 55.5 ms