RNA–Protein interactions for RNA: ENSMUST00000029941.15

Pdlim5-201, Transcript of PDZ and LIM domain protein 5, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Pdlim5, Length 5,016 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-201ENSMUST00000029941 Rims1Q99NE5 1463 aa14.57□□□□□ -0.08
Pdlim5-201ENSMUST00000029941 Mmp8O70138 465 aa14.57□□□□□ -0.08
Pdlim5-201ENSMUST00000029941 Sytl4Q9R0Q1 673 aa14.57□□□□□ -0.08
Pdlim5-201ENSMUST00000029941 GpkowQ56A08 488 aa14.57□□□□□ -0.08
Pdlim5-201ENSMUST00000029941 Dnaaf4Q8R368 420 aa14.57□□□□□ -0.08
Pdlim5-201ENSMUST00000029941 Il1rapl2Q9ERS6 686 aa14.57□□□□□ -0.08
Pdlim5-201ENSMUST00000029941 Gm21663A0A0G2JE01 267 aa14.57□□□□□ -0.08
Pdlim5-201ENSMUST00000029941 Plekhd1B2RPU2 505 aa14.57□□□□□ -0.08
Pdlim5-201ENSMUST00000029941 Gm7361D3Z6R1 267 aa14.57□□□□□ -0.08
Pdlim5-201ENSMUST00000029941 5031410I06RikE9Q4E0 267 aa14.57□□□□□ -0.08
Pdlim5-201ENSMUST00000029941 Gm1979E9QAN3 267 aa14.57□□□□□ -0.08
Pdlim5-201ENSMUST00000029941 Gm5862K7N5V5 267 aa14.57□□□□□ -0.08
Pdlim5-201ENSMUST00000029941 Gm10220K7N660 267 aa14.57□□□□□ -0.08
Pdlim5-201ENSMUST00000029941 Q8BT18 775 aa14.57□□□□□ -0.08
Pdlim5-201ENSMUST00000029941 Zkscan7E9PVW1 718 aa14.56□□□□□ -0.08
Pdlim5-201ENSMUST00000029941 Cavin1O54724 392 aa14.56□□□□□ -0.08
Pdlim5-201ENSMUST00000029941 Q4VA45 678 aa14.56□□□□□ -0.08
Pdlim5-201ENSMUST00000029941 Slu7Q8BHJ9 585 aa14.56□□□□□ -0.08
Pdlim5-201ENSMUST00000029941 Bloc1s2Q9CWG9 143 aa14.56□□□□□ -0.08
Pdlim5-201ENSMUST00000029941 Arhgap23Q69ZH9 1483 aa14.56□□□□□ -0.08
Pdlim5-201ENSMUST00000029941 Mns1Q61884 491 aa14.56□□□□□ -0.08
Pdlim5-201ENSMUST00000029941 Pdzrn3Q69ZS0 1063 aa14.56□□□□□ -0.08
Pdlim5-201ENSMUST00000029941 Sirt1Q923E4 737 aa14.56□□□□□ -0.08
Pdlim5-201ENSMUST00000029941 Speer4bQ9D9F7 267 aa14.56□□□□□ -0.08
Pdlim5-201ENSMUST00000029941 NhsB1AV60 1647 aa14.56□□□□□ -0.08
Pdlim5-201ENSMUST00000029941 Kiaa1210E9Q0C6 1637 aa14.55□□□□□ -0.08
Pdlim5-201ENSMUST00000029941 Uhrf1bp1lA2RSJ4 1457 aa14.55□□□□□ -0.08
Pdlim5-201ENSMUST00000029941 Smg7Q5RJH6 1138 aaKnown RBP14.55□□□□□ -0.08
Pdlim5-201ENSMUST00000029941 Hmg20bQ9Z104 317 aa14.55□□□□□ -0.08
Pdlim5-201ENSMUST00000029941 Stk36Q69ZM6 1316 aa14.55□□□□□ -0.08
Pdlim5-201ENSMUST00000029941 Atg4a-psA0A0G2JFS9 396 aa14.55□□□□□ -0.08
Pdlim5-201ENSMUST00000029941 Gadd45bP22339 160 aa14.55□□□□□ -0.08
Pdlim5-201ENSMUST00000029941 Eya1P97767 591 aa14.55□□□□□ -0.08
Pdlim5-201ENSMUST00000029941 Tmem87bQ8BKU8 555 aa14.55□□□□□ -0.08
Pdlim5-201ENSMUST00000029941 Kdm4aQ8BW72 1064 aa14.55□□□□□ -0.08
Pdlim5-201ENSMUST00000029941 AidaQ8C4Q6 305 aa14.55□□□□□ -0.08
Pdlim5-201ENSMUST00000029941 Atg4aQ8C9S8 396 aa14.55□□□□□ -0.08
Pdlim5-201ENSMUST00000029941 Spty2d1Q68FG3 682 aa14.55□□□□□ -0.08
Pdlim5-201ENSMUST00000029941 Tmem132eQ6IEE6 982 aa14.55□□□□□ -0.08
Pdlim5-201ENSMUST00000029941 Amotl1Q9D4H4 968 aa14.55□□□□□ -0.08
Pdlim5-201ENSMUST00000029941 Chd1lQ9CXF7 900 aa14.55□□□□□ -0.08
Pdlim5-201ENSMUST00000029941 TimelessQ9R1X4 1197 aa14.55□□□□□ -0.08
Pdlim5-201ENSMUST00000029941 Nphp3Q7TNH6 1325 aa14.54□□□□□ -0.08
Pdlim5-201ENSMUST00000029941 Mmel1Q9JLI3 765 aa14.54□□□□□ -0.08
Pdlim5-201ENSMUST00000029941 Ier5O89113 308 aa14.54□□□□□ -0.08
Pdlim5-201ENSMUST00000029941 Ccdc34Q3UI66 367 aa14.54□□□□□ -0.08
Pdlim5-201ENSMUST00000029941 Ccdc155Q80VJ8 648 aa14.54□□□□□ -0.08
Pdlim5-201ENSMUST00000029941 ImmtQ8CAQ8 757 aaKnown RBP14.54□□□□□ -0.08
Pdlim5-201ENSMUST00000029941 Znhit6Q3UFB2 460 aaKnown RBP14.54□□□□□ -0.08
Pdlim5-201ENSMUST00000029941 Limch1Q3UH68 1057 aa14.54□□□□□ -0.08
Pdlim5-201ENSMUST00000029941 Smc2Q8CG48 1191 aaKnown RBP14.54□□□□□ -0.08
Pdlim5-201ENSMUST00000029941 Rrs1Q9CYH6 365 aaKnown RBP14.54□□□□□ -0.08
Pdlim5-201ENSMUST00000029941 Gm45015A0A140LII9 184 aa14.54□□□□□ -0.08
Pdlim5-201ENSMUST00000029941 Gm18336A0A140LIU8 765 aa14.54□□□□□ -0.08
Pdlim5-201ENSMUST00000029941 Abca8bQ8K440 1620 aa14.53□□□□□ -0.08
Pdlim5-201ENSMUST00000029941 Eif3bQ8JZQ9 803 aaKnown RBP14.53□□□□□ -0.08
Pdlim5-201ENSMUST00000029941 Otud6bQ8K2H2 294 aa14.53□□□□□ -0.08
Pdlim5-201ENSMUST00000029941 Agtpbp1Q641K1 1218 aa14.53□□□□□ -0.08
Pdlim5-201ENSMUST00000029941 Cfap73J3QPZ5 306 aa14.53□□□□□ -0.08
Pdlim5-201ENSMUST00000029941 Anp32eP97822 260 aaKnown RBP14.53□□□□□ -0.08
Pdlim5-201ENSMUST00000029941 Ttc19Q8CC21 365 aa14.53□□□□□ -0.08
Pdlim5-201ENSMUST00000029941 Ipo7Q9EPL8 1038 aaKnown RBP14.53□□□□□ -0.08
Pdlim5-201ENSMUST00000029941 Usp25P57080 1055 aa14.53□□□□□ -0.08
Pdlim5-201ENSMUST00000029941 Abca6Q8K441 1624 aa14.53□□□□□ -0.08
Pdlim5-201ENSMUST00000029941 Gcom1E9PZ54 550 aa14.52□□□□□ -0.08
Pdlim5-201ENSMUST00000029941 MyzapQ3UIJ9 466 aa14.52□□□□□ -0.08
Pdlim5-201ENSMUST00000029941 Nol11Q8BJW5 723 aaKnown RBP14.52□□□□□ -0.08
Pdlim5-201ENSMUST00000029941 Fsd2Q8BZ52 692 aa14.52□□□□□ -0.08
Pdlim5-201ENSMUST00000029941 Rbm8a2A0A0N4SUH6 174 aa14.52□□□□□ -0.08
Pdlim5-201ENSMUST00000029941 Cdkl5Q3UTQ8 938 aa14.52□□□□□ -0.08
Pdlim5-201ENSMUST00000029941 Ddx58Q6Q899 926 aa14.52□□□□□ -0.08
Pdlim5-201ENSMUST00000029941 Rbm8aQ9CWZ3 174 aa14.52□□□□□ -0.08
Pdlim5-201ENSMUST00000029941 Gtf2f1Q3THK3 508 aaKnown RBP14.52□□□□□ -0.09
Pdlim5-201ENSMUST00000029941 Prpf4bQ61136 1007 aaKnown RBP14.52□□□□□ -0.09
Pdlim5-201ENSMUST00000029941 Bms1Q6PGF5 1284 aaKnown RBP14.52□□□□□ -0.09
Pdlim5-201ENSMUST00000029941 Utp18Q5SSI6 552 aaKnown RBP14.52□□□□□ -0.09
Pdlim5-201ENSMUST00000029941 Antxr1Q9CZ52 562 aa14.52□□□□□ -0.09
Pdlim5-201ENSMUST00000029941 Zfyve16Q80U44 1528 aa14.51□□□□□ -0.09
Pdlim5-201ENSMUST00000029941 Nucb2P81117 420 aa14.51□□□□□ -0.09
Pdlim5-201ENSMUST00000029941 Depdc5P61460 1591 aa14.51□□□□□ -0.09
Pdlim5-201ENSMUST00000029941 Trim29Q8R2Q0 587 aa14.51□□□□□ -0.09
Pdlim5-201ENSMUST00000029941 Chl1P70232 1209 aa14.51□□□□□ -0.09
Pdlim5-201ENSMUST00000029941 Tpm4Q6IRU2 248 aa14.51□□□□□ -0.09
Pdlim5-201ENSMUST00000029941 Amotl2Q8K371 772 aa14.51□□□□□ -0.09
Pdlim5-201ENSMUST00000029941 Fam50bQ9WTJ8 334 aa14.51□□□□□ -0.09
Pdlim5-201ENSMUST00000029941 ShprhQ7TPQ3 1674 aa14.51□□□□□ -0.09
Pdlim5-201ENSMUST00000029941 Krt82Q99M74 516 aa14.51□□□□□ -0.09
Pdlim5-201ENSMUST00000029941 Gm21680A0A0G2JGR8 267 aa14.5□□□□□ -0.09
Pdlim5-201ENSMUST00000029941 Stat1P42225 749 aa14.5□□□□□ -0.09
Pdlim5-201ENSMUST00000029941 Syt1P46096 421 aa14.5□□□□□ -0.09
Pdlim5-201ENSMUST00000029941 EappQ5BU09 281 aa14.5□□□□□ -0.09
Pdlim5-201ENSMUST00000029941 Ggt6Q6PDE7 497 aa14.5□□□□□ -0.09
Pdlim5-201ENSMUST00000029941 Rad50P70388 1312 aa14.5□□□□□ -0.09
Pdlim5-201ENSMUST00000029941 Med14A2ABV5 1459 aaKnown RBP14.5□□□□□ -0.09
Pdlim5-201ENSMUST00000029941 PzpQ61838 1495 aa14.5□□□□□ -0.09
Pdlim5-201ENSMUST00000029941 Rad17Q6NXW6 688 aa14.5□□□□□ -0.09
Pdlim5-201ENSMUST00000029941 Soga3Q6NZL0 945 aa14.5□□□□□ -0.09
Pdlim5-201ENSMUST00000029941 Tti2Q8BGV4 512 aa14.5□□□□□ -0.09
Pdlim5-201ENSMUST00000029941 Srgap1Q91Z69 1062 aa14.5□□□□□ -0.09
Pdlim5-201ENSMUST00000029941 Tmem94Q7TSH8 1360 aa14.5□□□□□ -0.09
Retrieved 100 of 22,080 RNA–protein pairs in 19.7 ms