RNA–Protein interactions for RNA: ENSMUST00000028769.12

Ptpra-201, Transcript of Receptor-type tyrosine-protein phosphatase alpha, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptpra, Length 3,227 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpra-201ENSMUST00000028769 Neurod6P48986 337 aa21.46■■□□□ 1.03
Ptpra-201ENSMUST00000028769 MecomP14404 1042 aa21.45■■□□□ 1.02
Ptpra-201ENSMUST00000028769 Atp6v1dP57746 247 aa21.45■■□□□ 1.02
Ptpra-201ENSMUST00000028769 Utp3Q9JI13 469 aaKnown RBP21.45■■□□□ 1.02
Ptpra-201ENSMUST00000028769 Gsdma3Q5Y4Y6 464 aa21.44■■□□□ 1.02
Ptpra-201ENSMUST00000028769 Top1mtQ8R4U6 593 aa21.44■■□□□ 1.02
Ptpra-201ENSMUST00000028769 Rufy3Q9D394 469 aa21.44■■□□□ 1.02
Ptpra-201ENSMUST00000028769 Cps1Q8C196 1500 aa21.44■■□□□ 1.02
Ptpra-201ENSMUST00000028769 Ddx17Q501J6 650 aaKnown RBP21.44■■□□□ 1.02
Ptpra-201ENSMUST00000028769 Ints3Q7TPD0 1041 aaKnown RBP21.44■■□□□ 1.02
Ptpra-201ENSMUST00000028769 E4f1Q8CCE9 783 aa21.44■■□□□ 1.02
Ptpra-201ENSMUST00000028769 Bend3Q6PAL0 825 aa21.43■■□□□ 1.02
Ptpra-201ENSMUST00000028769 Ush1cQ9ES64 910 aa21.43■■□□□ 1.02
Ptpra-201ENSMUST00000028769 Gpatch11Q3UFS4 262 aa21.43■■□□□ 1.02
Ptpra-201ENSMUST00000028769 Utp18Q5SSI6 552 aaKnown RBP21.43■■□□□ 1.02
Ptpra-201ENSMUST00000028769 CoilQ5SU73 570 aa21.43■■□□□ 1.02
Ptpra-201ENSMUST00000028769 Slc39a6Q8C145 765 aa21.43■■□□□ 1.02
Ptpra-201ENSMUST00000028769 Msh6P54276 1358 aaKnown RBP21.42■■□□□ 1.02
Ptpra-201ENSMUST00000028769 Cdk12Q14AX6 1484 aaKnown RBP21.42■■□□□ 1.02
Ptpra-201ENSMUST00000028769 Slc26a8Q8R0C3 999 aa21.42■■□□□ 1.02
Ptpra-201ENSMUST00000028769 PtmsQ9D0J8 101 aaKnown RBP21.42■■□□□ 1.02
Ptpra-201ENSMUST00000028769 PplQ9R269 1755 aa21.42■■□□□ 1.02
Ptpra-201ENSMUST00000028769 Gzf1Q4VBD9 706 aa21.41■■□□□ 1.02
Ptpra-201ENSMUST00000028769 Stk36Q69ZM6 1316 aa21.41■■□□□ 1.02
Ptpra-201ENSMUST00000028769 Smarce1O54941 411 aaKnown RBP21.41■■□□□ 1.02
Ptpra-201ENSMUST00000028769 Fam50bQ9WTJ8 334 aa21.41■■□□□ 1.02
Ptpra-201ENSMUST00000028769 Igfbp6P47880 238 aa21.4■■□□□ 1.02
Ptpra-201ENSMUST00000028769 GnpatP98192 678 aa21.4■■□□□ 1.02
Ptpra-201ENSMUST00000028769 Nol8Q3UHX0 1147 aaKnown RBP21.4■■□□□ 1.02
Ptpra-201ENSMUST00000028769 DpydQ8CHR6 1025 aa21.4■■□□□ 1.02
Ptpra-201ENSMUST00000028769 Stx6Q9JKK1 255 aa21.4■■□□□ 1.02
Ptpra-201ENSMUST00000028769 Ccdc66Q6NS45 935 aa21.39■■□□□ 1.02
Ptpra-201ENSMUST00000028769 Zbtb3Q91X45 518 aa21.39■■□□□ 1.02
Ptpra-201ENSMUST00000028769 Lmbr1lQ9D1E5 489 aa21.39■■□□□ 1.02
Ptpra-201ENSMUST00000028769 DmtnQ9WV69 405 aa21.39■■□□□ 1.02
Ptpra-201ENSMUST00000028769 Zfp804bA0A0G2JGH6 1343 aa21.39■■□□□ 1.01
Ptpra-201ENSMUST00000028769 CemipQ8BI06 1361 aa21.39■■□□□ 1.01
Ptpra-201ENSMUST00000028769 Becn1O88597 448 aa21.39■■□□□ 1.01
Ptpra-201ENSMUST00000028769 GckrQ91X44 587 aa21.39■■□□□ 1.01
Ptpra-201ENSMUST00000028769 Ms4a2P20490 235 aa21.38■■□□□ 1.01
Ptpra-201ENSMUST00000028769 Ercc3P49135 783 aa21.38■■□□□ 1.01
Ptpra-201ENSMUST00000028769 Tti2Q8BGV4 512 aa21.38■■□□□ 1.01
Ptpra-201ENSMUST00000028769 Sirt1Q923E4 737 aa21.38■■□□□ 1.01
Ptpra-201ENSMUST00000028769 Q9D9S1 216 aa21.38■■□□□ 1.01
Ptpra-201ENSMUST00000028769 LratQ9JI60 231 aa21.38■■□□□ 1.01
Ptpra-201ENSMUST00000028769 Kif1aP33173 1695 aa21.38■■□□□ 1.01
Ptpra-201ENSMUST00000028769 Mrpl50Q8VDT9 159 aaKnown RBP21.38■■□□□ 1.01
Ptpra-201ENSMUST00000028769 Echdc1Q9D9V3 322 aa21.38■■□□□ 1.01
Ptpra-201ENSMUST00000028769 Lmod3E9QA62 571 aa21.38■■□□□ 1.01
Ptpra-201ENSMUST00000028769 Pkp1P97350 728 aaKnown RBP21.38■■□□□ 1.01
Ptpra-201ENSMUST00000028769 Igsf1Q7TQA1 1317 aa21.38■■□□□ 1.01
Ptpra-201ENSMUST00000028769 Syt1P46096 421 aa21.37■■□□□ 1.01
Ptpra-201ENSMUST00000028769 Rad50P70388 1312 aa21.37■■□□□ 1.01
Ptpra-201ENSMUST00000028769 Polr3dQ91WD1 398 aa21.37■■□□□ 1.01
Ptpra-201ENSMUST00000028769 Bicc1Q99MQ1 977 aaKnown RBP21.37■■□□□ 1.01
Ptpra-201ENSMUST00000028769 AppP12023 770 aa21.37■■□□□ 1.01
Ptpra-201ENSMUST00000028769 Cnnm3Q32NY4 713 aa21.37■■□□□ 1.01
Ptpra-201ENSMUST00000028769 Ifit2Q64112 472 aa21.37■■□□□ 1.01
Ptpra-201ENSMUST00000028769 Fez1Q8K0X8 392 aa21.37■■□□□ 1.01
Ptpra-201ENSMUST00000028769 Camta1A2A891 1682 aa21.37■■□□□ 1.01
Ptpra-201ENSMUST00000028769 Pnpla7A2AJ88 1352 aa21.37■■□□□ 1.01
Ptpra-201ENSMUST00000028769 Znf335A2A5K6 1337 aa21.37■■□□□ 1.01
Ptpra-201ENSMUST00000028769 Ttll7A4Q9F0 912 aa21.36■■□□□ 1.01
Ptpra-201ENSMUST00000028769 CrebrfQ8CDG5 640 aaKnown RBP21.36■■□□□ 1.01
Ptpra-201ENSMUST00000028769 Rassf8Q8CJ96 419 aa21.36■■□□□ 1.01
Ptpra-201ENSMUST00000028769 Zc3h13E9Q784 1729 aaKnown RBP21.36■■□□□ 1.01
Ptpra-201ENSMUST00000028769 Cnnm1Q0GA42 951 aa21.36■■□□□ 1.01
Ptpra-201ENSMUST00000028769 Mdm2P23804 489 aa21.36■■□□□ 1.01
Ptpra-201ENSMUST00000028769 Cct4P80315 539 aaKnown RBP21.36■■□□□ 1.01
Ptpra-201ENSMUST00000028769 Evi5lH3BKQ3 813 aa21.35■■□□□ 1.01
Ptpra-201ENSMUST00000028769 Anapc15P60007 132 aa21.35■■□□□ 1.01
Ptpra-201ENSMUST00000028769 Dhx38Q80X98 1228 aa21.35■■□□□ 1.01
Ptpra-201ENSMUST00000028769 Serpina10Q8R121 448 aa21.35■■□□□ 1.01
Ptpra-201ENSMUST00000028769 Fam84aQ9D650 292 aa21.35■■□□□ 1.01
Ptpra-201ENSMUST00000028769 Amotl1Q9D4H4 968 aa21.35■■□□□ 1.01
Ptpra-201ENSMUST00000028769 Ripk4Q9ERK0 786 aa21.35■■□□□ 1.01
Ptpra-201ENSMUST00000028769 Rbm8a2A0A0N4SUH6 174 aa21.34■■□□□ 1.01
Ptpra-201ENSMUST00000028769 Ccar2Q8VDP4 922 aaKnown RBP21.34■■□□□ 1.01
Ptpra-201ENSMUST00000028769 Rbm8aQ9CWZ3 174 aa21.34■■□□□ 1.01
Ptpra-201ENSMUST00000028769 Cnksr1A2A9K7 700 aa21.34■■□□□ 1.01
Ptpra-201ENSMUST00000028769 Fam228bQ497Q6 232 aa21.34■■□□□ 1.01
Ptpra-201ENSMUST00000028769 Zranb3Q6NZP1 1069 aa21.34■■□□□ 1.01
Ptpra-201ENSMUST00000028769 Prkab2Q6PAM0 271 aa21.34■■□□□ 1.01
Ptpra-201ENSMUST00000028769 Tnrc6bQ8BKI2 1810 aaKnown RBP21.33■■□□□ 1.01
Ptpra-201ENSMUST00000028769 Ppfia1B2RXQ2 1266 aa21.33■■□□□ 1.01
Ptpra-201ENSMUST00000028769 Sf3a1Q8K4Z5 791 aaKnown RBP21.33■■□□□ 1.01
Ptpra-201ENSMUST00000028769 Cd22P35329 862 aa21.33■■□□□ 1
Ptpra-201ENSMUST00000028769 SympkQ80X82 1284 aa21.33■■□□□ 1
Ptpra-201ENSMUST00000028769 Adcy9P51830 1353 aa21.32■■□□□ 1
Ptpra-201ENSMUST00000028769 Ugt1a5B2RT14 529 aa21.32■■□□□ 1
Ptpra-201ENSMUST00000028769 Ubap1lG3UW59 384 aa21.32■■□□□ 1
Ptpra-201ENSMUST00000028769 Strn4P58404 760 aa21.32■■□□□ 1
Ptpra-201ENSMUST00000028769 Adcy5P84309 1262 aa21.32■■□□□ 1
Ptpra-201ENSMUST00000028769 Sh3bp5Q9Z131 463 aa21.32■■□□□ 1
Ptpra-201ENSMUST00000028769 Irf9Q61179 399 aa21.32■■□□□ 1
Ptpra-201ENSMUST00000028769 Mknk2Q8CDB0 459 aa21.32■■□□□ 1
Ptpra-201ENSMUST00000028769 Ccdc178Q8CDV0 866 aa21.32■■□□□ 1
Ptpra-201ENSMUST00000028769 Taf5lQ91WQ5 589 aa21.32■■□□□ 1
Ptpra-201ENSMUST00000028769 PigbQ9JJQ0 542 aa21.32■■□□□ 1
Ptpra-201ENSMUST00000028769 Adgrb1Q3UHD1 1582 aa21.32■■□□□ 1
Retrieved 100 of 22,080 RNA–protein pairs in 124.1 ms