RNA–Protein interactions for RNA: ENSMUST00000004430.13

Clcn3-201, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,175 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-201ENSMUST00000004430 NpatQ8BMA5 1420 aa15.09■□□□□ 0.01
Clcn3-201ENSMUST00000004430 Gm10471E9Q1C7 252 aa15.09■□□□□ 0.01
Clcn3-201ENSMUST00000004430 Jarid2Q62315 1234 aa15.09■□□□□ 0.01
Clcn3-201ENSMUST00000004430 Dennd6aQ8BH65 605 aa15.09■□□□□ 0.01
Clcn3-201ENSMUST00000004430 Zmym3Q9JLM4 1370 aa15.09■□□□□ 0.01
Clcn3-201ENSMUST00000004430 Map3k19E9Q3S4 1311 aa15.09■□□□□ 0.01
Clcn3-201ENSMUST00000004430 Sos1Q62245 1319 aa15.09■□□□□ 0.01
Clcn3-201ENSMUST00000004430 PtprmP28828 1452 aa15.09■□□□□ 0.01
Clcn3-201ENSMUST00000004430 Chpf2Q3UU43 768 aa15.09■□□□□ 0.01
Clcn3-201ENSMUST00000004430 Idi2Q8BFZ6 227 aa15.09■□□□□ 0.01
Clcn3-201ENSMUST00000004430 RestQ8VIG1 1082 aa15.09■□□□□ 0.01
Clcn3-201ENSMUST00000004430 Cfap99A0A140LIX9 648 aa15.08■□□□□ 0.01
Clcn3-201ENSMUST00000004430 Snap23O09044 210 aa15.08■□□□□ 0.01
Clcn3-201ENSMUST00000004430 Aldh8a1Q8BH00 487 aa15.08■□□□□ 0.01
Clcn3-201ENSMUST00000004430 Chmp7Q8R1T1 451 aa15.08■□□□□ 0.01
Clcn3-201ENSMUST00000004430 Polr3dQ91WD1 398 aa15.08■□□□□ 0.01
Clcn3-201ENSMUST00000004430 Kcnn1Q9EQR3 537 aa15.08■□□□□ 0.01
Clcn3-201ENSMUST00000004430 Zap70P43404 618 aa15.08■□□□□ 0
Clcn3-201ENSMUST00000004430 Stk38Q91VJ4 465 aa15.08■□□□□ 0
Clcn3-201ENSMUST00000004430 Ube2hP62257 183 aa15.08■□□□□ 0
Clcn3-201ENSMUST00000004430 Nrxn1Q9CS84 1514 aa15.07■□□□□ 0
Clcn3-201ENSMUST00000004430 Irgm2A0A140LIF8 407 aa15.07■□□□□ 0
Clcn3-201ENSMUST00000004430 Cep57l1Q8VDS7 400 aa15.07■□□□□ 0
Clcn3-201ENSMUST00000004430 PhaxQ9JJT9 385 aaKnown RBP15.07■□□□□ 0
Clcn3-201ENSMUST00000004430 Fsd1Q7TPM6 496 aa15.07■□□□□ 0
Clcn3-201ENSMUST00000004430 Nol11Q8BJW5 723 aaKnown RBP15.07■□□□□ 0
Clcn3-201ENSMUST00000004430 Qser1A2BIE1 1698 aa15.07■□□□□ 0
Clcn3-201ENSMUST00000004430 Vgll3P85442 326 aa15.06■□□□□ 0
Clcn3-201ENSMUST00000004430 Gm45015A0A140LII9 184 aa15.06■□□□□ 0
Clcn3-201ENSMUST00000004430 Gm18336A0A140LIU8 765 aa15.06■□□□□ 0
Clcn3-201ENSMUST00000004430 Fyb1O35601 819 aa15.06■□□□□ 0
Clcn3-201ENSMUST00000004430 Usp25P57080 1055 aa15.06■□□□□ 0
Clcn3-201ENSMUST00000004430 Strn4P58404 760 aa15.06■□□□□ 0
Clcn3-201ENSMUST00000004430 Mrps27Q8BK72 415 aaKnown RBP15.06■□□□□ 0
Clcn3-201ENSMUST00000004430 Znf521Q6KAS7 1311 aa15.06■□□□□ 0
Clcn3-201ENSMUST00000004430 Prdm2A2A7B5 1709 aaKnown RBP15.06■□□□□ 0
Clcn3-201ENSMUST00000004430 Bin1O08539 588 aaKnown RBP15.06■□□□□ 0
Clcn3-201ENSMUST00000004430 Mns1Q61884 491 aa15.06■□□□□ 0
Clcn3-201ENSMUST00000004430 Fam193aQ8CGI1 1231 aaKnown RBP15.06■□□□□ 0
Clcn3-201ENSMUST00000004430 Ttc21aQ8C0S4 1314 aa15.06■□□□□ 0
Clcn3-201ENSMUST00000004430 NefhP19246 1090 aa15.06■□□□□ 0
Clcn3-201ENSMUST00000004430 Cnnm1Q0GA42 951 aa15.06■□□□□ 0
Clcn3-201ENSMUST00000004430 Mindy4Q3UQI9 744 aa15.06■□□□□ 0
Clcn3-201ENSMUST00000004430 Gsdma3Q5Y4Y6 464 aa15.06■□□□□ 0
Clcn3-201ENSMUST00000004430 Trim25Q61510 634 aaKnown RBP15.06■□□□□ 0
Clcn3-201ENSMUST00000004430 Kdm4aQ8BW72 1064 aa15.06■□□□□ 0
Clcn3-201ENSMUST00000004430 Gtf2f1Q3THK3 508 aaKnown RBP15.05■□□□□ 0
Clcn3-201ENSMUST00000004430 Atg4a-psA0A0G2JFS9 396 aa15.05■□□□□ -0
Clcn3-201ENSMUST00000004430 Cct2P80314 535 aaKnown RBP15.05■□□□□ -0
Clcn3-201ENSMUST00000004430 Ddx19aQ61655 478 aaKnown RBP15.05■□□□□ -0
Clcn3-201ENSMUST00000004430 Atg4aQ8C9S8 396 aa15.05■□□□□ -0
Clcn3-201ENSMUST00000004430 Wdr33Q8K4P0 1330 aaKnown RBP15.05■□□□□ -0
Clcn3-201ENSMUST00000004430 Eif5P59325 429 aaKnown RBP15.05■□□□□ -0
Clcn3-201ENSMUST00000004430 Pdzrn3Q69ZS0 1063 aa15.05■□□□□ -0
Clcn3-201ENSMUST00000004430 Ano6Q6P9J9 911 aa15.05■□□□□ -0
Clcn3-201ENSMUST00000004430 Ppp6r1Q7TSI3 856 aa15.05■□□□□ -0
Clcn3-201ENSMUST00000004430 Gas2l3Q3UWW6 683 aa15.04■□□□□ -0
Clcn3-201ENSMUST00000004430 Gys2Q8VCB3 704 aa15.04■□□□□ -0
Clcn3-201ENSMUST00000004430 Hecw2Q6I6G8 1578 aa15.04■□□□□ -0
Clcn3-201ENSMUST00000004430 Cfap58B2RW38 873 aa15.04■□□□□ -0
Clcn3-201ENSMUST00000004430 Ncbp3Q8BZR9 615 aaKnown RBP15.04■□□□□ -0
Clcn3-201ENSMUST00000004430 Srek1Q8BZX4 494 aaKnown RBP15.04■□□□□ -0
Clcn3-201ENSMUST00000004430 Zbtb3Q91X45 518 aa15.04■□□□□ -0
Clcn3-201ENSMUST00000004430 ZwintQ9CQU5 252 aa15.04■□□□□ -0
Clcn3-201ENSMUST00000004430 PaskQ8CEE6 1383 aa15.04■□□□□ -0
Clcn3-201ENSMUST00000004430 Zbtb21E9Q444 1094 aa15.03■□□□□ -0
Clcn3-201ENSMUST00000004430 Mlh1Q9JK91 760 aa15.03■□□□□ -0
Clcn3-201ENSMUST00000004430 Slu7Q8BHJ9 585 aa15.03■□□□□ -0
Clcn3-201ENSMUST00000004430 Tsr2Q8C8T8 191 aa15.03■□□□□ -0
Clcn3-201ENSMUST00000004430 Plekhg1F6S200 1446 aa15.03■□□□□ -0
Clcn3-201ENSMUST00000004430 Gm9992B2RWK3 458 aa15.03■□□□□ -0
Clcn3-201ENSMUST00000004430 Pa2g4P50580 394 aaKnown RBP15.03■□□□□ -0
Clcn3-201ENSMUST00000004430 Cplx2P84086 134 aa15.03■□□□□ -0
Clcn3-201ENSMUST00000004430 Ltv1Q6NSQ7 470 aaKnown RBP15.03■□□□□ -0
Clcn3-201ENSMUST00000004430 Unc93aQ710D3 458 aa15.03■□□□□ -0
Clcn3-201ENSMUST00000004430 Rsph6aQ8CDR2 708 aa15.03■□□□□ -0
Clcn3-201ENSMUST00000004430 Otud6bQ8K2H2 294 aa15.03■□□□□ -0
Clcn3-201ENSMUST00000004430 Ccdc102aQ3TMW1 549 aa15.02■□□□□ -0
Clcn3-201ENSMUST00000004430 Ndufa8Q9DCJ5 172 aa15.02■□□□□ -0
Clcn3-201ENSMUST00000004430 Me1P06801 572 aa15.02□□□□□ -0.01
Clcn3-201ENSMUST00000004430 U2af2P26369 475 aaKnown RBP15.02□□□□□ -0.01
Clcn3-201ENSMUST00000004430 Irf5P56477 497 aa15.02□□□□□ -0.01
Clcn3-201ENSMUST00000004430 Trim28Q62318 834 aa15.02□□□□□ -0.01
Clcn3-201ENSMUST00000004430 Grpel1Q99LP6 217 aa15.02□□□□□ -0.01
Clcn3-201ENSMUST00000004430 Cul9Q80TT8 1865 aa15.01□□□□□ -0.01
Clcn3-201ENSMUST00000004430 Eif4a2P10630 407 aa15.01□□□□□ -0.01
Clcn3-201ENSMUST00000004430 Btbd11Q6GQW0 1109 aa15.01□□□□□ -0.01
Clcn3-201ENSMUST00000004430 Ift172Q6VH22 1749 aa15.01□□□□□ -0.01
Clcn3-201ENSMUST00000004430 Pik3r4Q8VD65 1358 aa15.01□□□□□ -0.01
Clcn3-201ENSMUST00000004430 Ercc6l2Q9JIM3 1537 aa15.01□□□□□ -0.01
Clcn3-201ENSMUST00000004430 Ercc3P49135 783 aa15.01□□□□□ -0.01
Clcn3-201ENSMUST00000004430 Nucb2P81117 420 aa15.01□□□□□ -0.01
Clcn3-201ENSMUST00000004430 Tmco3Q8BH01 678 aa15.01□□□□□ -0.01
Clcn3-201ENSMUST00000004430 Pms1Q8K119 917 aa15.01□□□□□ -0.01
Clcn3-201ENSMUST00000004430 Kif2cQ922S8 721 aa15.01□□□□□ -0.01
Clcn3-201ENSMUST00000004430 Med14A2ABV5 1459 aaKnown RBP15□□□□□ -0.01
Clcn3-201ENSMUST00000004430 PsapQ61207 557 aaKnown RBP15□□□□□ -0.01
Clcn3-201ENSMUST00000004430 Q8BT18 775 aa15□□□□□ -0.01
Clcn3-201ENSMUST00000004430 CltcQ68FD5 1675 aaKnown RBP15□□□□□ -0.01
Clcn3-201ENSMUST00000004430 Elp1Q7TT37 1333 aaKnown RBP15□□□□□ -0.01
Retrieved 100 of 22,080 RNA–protein pairs in 60.7 ms