RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 J3KTA2 159 aa10.51□□□□□ -0.73
SNIP1-204ENST00000638725 AP3D1O14617 1153 aa10.51□□□□□ -0.73
SNIP1-204ENST00000638725 SCAMP2O15127 329 aaKnown RBP10.51□□□□□ -0.73
SNIP1-204ENST00000638725 SEPT4O43236 478 aa10.51□□□□□ -0.73
SNIP1-204ENST00000638725 PRMT3O60678 531 aa10.51□□□□□ -0.73
SNIP1-204ENST00000638725 APOA1P02647 267 aa10.51□□□□□ -0.73
SNIP1-204ENST00000638725 KRT8P05787 483 aa10.51□□□□□ -0.73
SNIP1-204ENST00000638725 C8GP07360 202 aa10.51□□□□□ -0.73
SNIP1-204ENST00000638725 PCGF2P35227 344 aa10.51□□□□□ -0.73
SNIP1-204ENST00000638725 PFN3P60673 137 aa10.51□□□□□ -0.73
SNIP1-204ENST00000638725 SELENOWP63302 87 aa10.51□□□□□ -0.73
SNIP1-204ENST00000638725 FKBP1BP68106 108 aa10.51□□□□□ -0.73
SNIP1-204ENST00000638725 SMARCB1Q12824 385 aa10.51□□□□□ -0.73
SNIP1-204ENST00000638725 CSTF3Q12996 717 aaKnown RBP10.51□□□□□ -0.73
SNIP1-204ENST00000638725 PLD1Q13393 1074 aa10.51□□□□□ -0.73
SNIP1-204ENST00000638725 HKDC1Q2TB90 917 aa10.51□□□□□ -0.73
SNIP1-204ENST00000638725 THOC7Q6I9Y2 204 aaKnown RBP10.51□□□□□ -0.73
SNIP1-204ENST00000638725 CRTC1Q6UUV9 634 aa10.51□□□□□ -0.73
SNIP1-204ENST00000638725 ZNF852Q6ZMS4 543 aa10.51□□□□□ -0.73
SNIP1-204ENST00000638725 DCAF4L2Q8NA75 395 aa10.51□□□□□ -0.73
SNIP1-204ENST00000638725 OR4C15Q8NGM1 316 aa10.51□□□□□ -0.73
SNIP1-204ENST00000638725 CHAC2Q8WUX2 184 aa10.51□□□□□ -0.73
SNIP1-204ENST00000638725 BCL7CQ8WUZ0 217 aaPredicted RBP10.51□□□□□ -0.73
SNIP1-204ENST00000638725 TP53INP1Q96A56 240 aa10.51□□□□□ -0.73
SNIP1-204ENST00000638725 PRM3Q9NNZ6 103 aa10.51□□□□□ -0.73
SNIP1-204ENST00000638725 IMPAD1Q9NX62 359 aa10.51□□□□□ -0.73
SNIP1-204ENST00000638725 MKLN1Q9UL63 735 aa10.51□□□□□ -0.73
SNIP1-204ENST00000638725 POFUT2Q9Y2G5 429 aa10.51□□□□□ -0.73
SNIP1-204ENST00000638725 H7C4K7 107 aa10.51□□□□□ -0.73
SNIP1-204ENST00000638725 RGS13O14921 159 aa10.51□□□□□ -0.73
SNIP1-204ENST00000638725 ETHE1O95571 254 aa10.51□□□□□ -0.73
SNIP1-204ENST00000638725 ANXA8P13928 327 aa10.51□□□□□ -0.73
SNIP1-204ENST00000638725 SOX6P35712 828 aa10.51□□□□□ -0.73
SNIP1-204ENST00000638725 PIK3CBP42338 1070 aa10.51□□□□□ -0.73
SNIP1-204ENST00000638725 OR2B6P58173 313 aa10.51□□□□□ -0.73
SNIP1-204ENST00000638725 KRR1Q13601 381 aaKnown RBP10.51□□□□□ -0.73
SNIP1-204ENST00000638725 DMC1Q14565 340 aa10.51□□□□□ -0.73
SNIP1-204ENST00000638725 BCL7AQ4VC05 210 aa10.51□□□□□ -0.73
SNIP1-204ENST00000638725 XKR6Q5GH73 641 aa10.51□□□□□ -0.73
SNIP1-204ENST00000638725 COX20Q5RI15 118 aa10.51□□□□□ -0.73
SNIP1-204ENST00000638725 NXNL2Q5VZ03 156 aa10.51□□□□□ -0.73
SNIP1-204ENST00000638725 MFSD14CQ5VZR4 134 aa10.51□□□□□ -0.73
SNIP1-204ENST00000638725 SERPINA13PQ6UXR4 307 aa10.51□□□□□ -0.73
SNIP1-204ENST00000638725 NANOGNBQ7Z5D8 188 aa10.51□□□□□ -0.73
SNIP1-204ENST00000638725 NPAS3Q8IXF0 933 aa10.51□□□□□ -0.73
SNIP1-204ENST00000638725 CBARPQ8N350 705 aaPredicted RBP10.51□□□□□ -0.73
SNIP1-204ENST00000638725 C11orf65Q8NCR3 313 aa10.51□□□□□ -0.73
SNIP1-204ENST00000638725 FAM8A1Q9UBU6 413 aa10.51□□□□□ -0.73
SNIP1-204ENST00000638725 ZNF221Q9UK13 617 aa10.51□□□□□ -0.73
SNIP1-204ENST00000638725 GABRQQ9UN88 632 aa10.51□□□□□ -0.73
SNIP1-204ENST00000638725 RUVBL1Q9Y265 456 aaKnown RBP10.51□□□□□ -0.73
SNIP1-204ENST00000638725 KLK4Q9Y5K2 254 aa10.51□□□□□ -0.73
SNIP1-204ENST00000638725 N6AMT1Q9Y5N5 214 aa10.51□□□□□ -0.73
SNIP1-204ENST00000638725 PNMA8CA0A1B0GUJ8 204 aa10.5□□□□□ -0.73
SNIP1-204ENST00000638725 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.5□□□□□ -0.73
SNIP1-204ENST00000638725 PDZK1P1A8MUH7 402 aa10.5□□□□□ -0.73
SNIP1-204ENST00000638725 E7EQ34 232 aa10.5□□□□□ -0.73
SNIP1-204ENST00000638725 LOC110117498-PIK3R3F6TDL0 507 aa10.5□□□□□ -0.73
SNIP1-204ENST00000638725 H3BQ06 376 aaPredicted RBP10.5□□□□□ -0.73
SNIP1-204ENST00000638725 IDH3BO43837 385 aa10.5□□□□□ -0.73
SNIP1-204ENST00000638725 BNIP3LO60238 219 aa10.5□□□□□ -0.73
SNIP1-204ENST00000638725 MTX2O75431 263 aa10.5□□□□□ -0.73
SNIP1-204ENST00000638725 CYP7B1O75881 506 aa10.5□□□□□ -0.73
SNIP1-204ENST00000638725 OR56A5P0C7T3 313 aa10.5□□□□□ -0.73
SNIP1-204ENST00000638725 ETFAP13804 333 aa10.5□□□□□ -0.73
SNIP1-204ENST00000638725 OR1D2P34982 312 aa10.5□□□□□ -0.73
SNIP1-204ENST00000638725 ETV6P41212 452 aa10.5□□□□□ -0.73
SNIP1-204ENST00000638725 CRATP43155 626 aa10.5□□□□□ -0.73
SNIP1-204ENST00000638725 SLC15A1P46059 708 aa10.5□□□□□ -0.73
SNIP1-204ENST00000638725 HNMTP50135 292 aa10.5□□□□□ -0.73
SNIP1-204ENST00000638725 DGKEP52429 567 aa10.5□□□□□ -0.73
SNIP1-204ENST00000638725 SMAD3P84022 425 aaKnown RBP10.5□□□□□ -0.73
SNIP1-204ENST00000638725 LRRC26Q2I0M4 334 aa10.5□□□□□ -0.73
SNIP1-204ENST00000638725 ATAD3CQ5T2N8 411 aa10.5□□□□□ -0.73
SNIP1-204ENST00000638725 CPTPQ5TA50 214 aa10.5□□□□□ -0.73
SNIP1-204ENST00000638725 DEPDC4Q8N2C3 294 aa10.5□□□□□ -0.73
SNIP1-204ENST00000638725 C1orf52Q8N6N3 182 aaKnown RBP10.5□□□□□ -0.73
SNIP1-204ENST00000638725 DENND6BQ8NEG7 585 aa10.5□□□□□ -0.73
SNIP1-204ENST00000638725 OR6F1Q8NGZ6 308 aa10.5□□□□□ -0.73
SNIP1-204ENST00000638725 WDR20Q8TBZ3 569 aa10.5□□□□□ -0.73
SNIP1-204ENST00000638725 C2orf15Q8WU43 125 aaKnown RBP10.5□□□□□ -0.73
SNIP1-204ENST00000638725 GTPBP3Q969Y2 492 aaKnown RBP10.5□□□□□ -0.73
SNIP1-204ENST00000638725 ASIC4Q96FT7 647 aa10.5□□□□□ -0.73
SNIP1-204ENST00000638725 CEP19Q96LK0 163 aa10.5□□□□□ -0.73
SNIP1-204ENST00000638725 NEDD4LQ96PU5 975 aa10.5□□□□□ -0.73
SNIP1-204ENST00000638725 MGLLQ99685 303 aa10.5□□□□□ -0.73
SNIP1-204ENST00000638725 TSEN34Q9BSV6 310 aaKnown RBP10.5□□□□□ -0.73
SNIP1-204ENST00000638725 ARHGAP39Q9C0H5 1083 aa10.5□□□□□ -0.73
SNIP1-204ENST00000638725 TMEM161AQ9NX61 479 aa10.5□□□□□ -0.73
SNIP1-204ENST00000638725 TBC1D24Q9ULP9 559 aa10.5□□□□□ -0.73
SNIP1-204ENST00000638725 SERTM1A2A2V5 107 aa10.5□□□□□ -0.73
SNIP1-204ENST00000638725 SNX4O95219 450 aa10.5□□□□□ -0.73
SNIP1-204ENST00000638725 CYP2A7P20853 494 aa10.5□□□□□ -0.73
SNIP1-204ENST00000638725 CCND3P30281 292 aaPredicted RBP10.5□□□□□ -0.73
SNIP1-204ENST00000638725 HTR3AP46098 478 aa10.5□□□□□ -0.73
SNIP1-204ENST00000638725 OLR1P78380 273 aa10.5□□□□□ -0.73
SNIP1-204ENST00000638725 RAE1P78406 368 aaKnown RBP10.5□□□□□ -0.73
SNIP1-204ENST00000638725 MICAQ29983 383 aa10.5□□□□□ -0.73
SNIP1-204ENST00000638725 IFI44LQ53G44 452 aa10.5□□□□□ -0.73
SNIP1-204ENST00000638725 LRRC73Q5JTD7 316 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms