RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 TXLNGQ9NUQ3 528 aa2.89□□□□□ -1.95
VIM-210ENST00000637053 MED17Q9NVC6 651 aa2.89□□□□□ -1.95
VIM-210ENST00000637053 ZNF446Q9NWS9 450 aa2.89□□□□□ -1.95
VIM-210ENST00000637053 GTSE1Q9NYZ3 720 aa2.89□□□□□ -1.95
VIM-210ENST00000637053 MTCH1Q9NZJ7 389 aa2.89□□□□□ -1.95
VIM-210ENST00000637053 RBPJLQ9UBG7 517 aa2.89□□□□□ -1.95
VIM-210ENST00000637053 HSPB7Q9UBY9 170 aa2.89□□□□□ -1.95
VIM-210ENST00000637053 POLLQ9UGP5 575 aa2.89□□□□□ -1.95
VIM-210ENST00000637053 NARFQ9UHQ1 456 aa2.89□□□□□ -1.95
VIM-210ENST00000637053 ENOPH1Q9UHY7 261 aa2.89□□□□□ -1.95
VIM-210ENST00000637053 SIX4Q9UIU6 781 aa2.89□□□□□ -1.95
VIM-210ENST00000637053 CD207Q9UJ71 328 aa2.89□□□□□ -1.95
VIM-210ENST00000637053 ERRFI1Q9UJM3 462 aaPredicted RBP2.89□□□□□ -1.95
VIM-210ENST00000637053 MAN1B1Q9UKM7 699 aa2.89□□□□□ -1.95
VIM-210ENST00000637053 RAB23Q9ULC3 237 aa2.89□□□□□ -1.95
VIM-210ENST00000637053 NFU1Q9UMS0 254 aa2.89□□□□□ -1.95
VIM-210ENST00000637053 SCML1Q9UN30 329 aa2.89□□□□□ -1.95
VIM-210ENST00000637053 PCDHA12Q9UN75 941 aa2.89□□□□□ -1.95
VIM-210ENST00000637053 SNX7Q9UNH6 387 aa2.89□□□□□ -1.95
VIM-210ENST00000637053 SLC12A4Q9UP95 1085 aa2.89□□□□□ -1.95
VIM-210ENST00000637053 POFUT2Q9Y2G5 429 aa2.89□□□□□ -1.95
VIM-210ENST00000637053 PKP3Q9Y446 797 aa2.89□□□□□ -1.95
VIM-210ENST00000637053 PCDHAC2Q9Y5I4 1007 aa2.89□□□□□ -1.95
VIM-210ENST00000637053 A0A087WUV0 522 aaPredicted RBP2.88□□□□□ -1.95
VIM-210ENST00000637053 A0A0A6YYK5 440 aaPredicted RBP2.88□□□□□ -1.95
VIM-210ENST00000637053 A0A0G2JLW4 131 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 LOC102723971A0A1B0GUV8 181 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 A0A1W2PQ72 361 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 A0A1W2PR77 199 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 LNP1A1A4G5 178 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 MBLAC1A4D2B0 266 aaPredicted RBP2.88□□□□□ -1.95
VIM-210ENST00000637053 MTMR11A4FU01 709 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 DPPA5A6NC42 116 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 C2orf78A6NCI8 922 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 SYCE1LA8MT33 242 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 A8MX80 341 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 GRXCR1A8MXD5 290 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 E5RI56 91 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 LRRN3E7EW58 273 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 H3BMM5 538 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 H7C4K7 107 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 FOXE1O00358 373 aaPredicted RBP2.88□□□□□ -1.95
VIM-210ENST00000637053 TOR1AO14656 332 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 BCKDKO14874 412 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 ATG13O75143 517 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 UNC5CO95185 931 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 LUC7L3O95232 432 aaKnown RBP2.88□□□□□ -1.95
VIM-210ENST00000637053 MOCS3O95396 460 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 FCER2P06734 321 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 ADH4P08319 380 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 KRT16P08779 473 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 GNAO1P09471 354 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 ALPIP09923 528 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 OR2T7P0C7T2 308 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 MCF2P10911 925 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 CHRNB1P11230 501 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 AKR1A1P14550 325 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 MMP9P14780 707 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 CPA3P15088 417 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 SYT1P21579 422 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 BMP5P22003 454 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 MGAT1P26572 445 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 HMOX2P30519 316 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 ADRA1AP35348 466 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 CHI3L1P36222 383 aaPredicted RBP2.88□□□□□ -1.95
VIM-210ENST00000637053 BCL6P41182 706 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 ARRB1P49407 418 aaPredicted RBP2.88□□□□□ -1.95
VIM-210ENST00000637053 CXCR3P49682 368 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 RGS4P49798 205 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 PLK1P53350 603 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 CDH4P55283 916 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 C21orf59P57076 290 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 AP3S2P59780 193 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 MRPS25P82663 173 aaKnown RBP2.88□□□□□ -1.95
VIM-210ENST00000637053 SHC2P98077 582 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 REEP5Q00765 189 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 CNTN2Q02246 1040 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 BDH1Q02338 343 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 KLC1Q07866 573 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 FOXM1Q08050 763 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 SIGLEC14Q08ET2 396 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 PMPCAQ10713 525 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 TSPAN31Q12999 210 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 SNTA1Q13424 505 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 TOP3AQ13472 1001 aaPredicted RBP2.88□□□□□ -1.95
VIM-210ENST00000637053 NFYCQ13952 458 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 PCOLCEQ15113 449 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 TGFBIQ15582 683 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 NPY5RQ15761 445 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 CAMK4Q16566 473 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 GSTA3Q16772 222 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 ME3Q16798 604 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 EXOC3L2Q2M3D2 409 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 GOLGA7BQ2TAP0 167 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 TBRG1Q3YBR2 411 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 CBWD6Q4V339 395 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 ZCWPW2Q504Y3 356 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 ACTBL2Q562R1 376 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 CBWD3Q5JTY5 395 aa2.88□□□□□ -1.95
VIM-210ENST00000637053 EPHA10Q5JZY3 1008 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms