RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 ART4Q93070 314 aa17.3■□□□□ 0.36
CACNA1A-227ENST00000636549 GABRQQ9UN88 632 aa17.3■□□□□ 0.36
CACNA1A-227ENST00000636549 ICKQ9UPZ9 632 aa17.3■□□□□ 0.36
CACNA1A-227ENST00000636549 OR1A2Q9Y585 309 aa17.3■□□□□ 0.36
CACNA1A-227ENST00000636549 EFCAB9A8MZ26 197 aa17.3■□□□□ 0.36
CACNA1A-227ENST00000636549 ADAMTS3O15072 1205 aa17.3■□□□□ 0.36
CACNA1A-227ENST00000636549 PROM1O43490 865 aa17.3■□□□□ 0.36
CACNA1A-227ENST00000636549 PI15O43692 258 aa17.3■□□□□ 0.36
CACNA1A-227ENST00000636549 CILPO75339 1184 aa17.3■□□□□ 0.36
CACNA1A-227ENST00000636549 C6orf47O95873 294 aa17.3■□□□□ 0.36
CACNA1A-227ENST00000636549 AIF1P55008 147 aa17.3■□□□□ 0.36
CACNA1A-227ENST00000636549 MBOAT1Q6ZNC8 495 aa17.3■□□□□ 0.36
CACNA1A-227ENST00000636549 POLR2J3Q9H1A7 115 aaKnown RBP17.3■□□□□ 0.36
CACNA1A-227ENST00000636549 SLC32A1Q9H598 525 aa17.3■□□□□ 0.36
CACNA1A-227ENST00000636549 TAS2R1Q9NYW7 299 aa17.3■□□□□ 0.36
CACNA1A-227ENST00000636549 NLGN3Q9NZ94 848 aa17.3■□□□□ 0.36
CACNA1A-227ENST00000636549 STXBP5LQ9Y2K9 1186 aa17.3■□□□□ 0.36
CACNA1A-227ENST00000636549 SPATA31C1P0DKV0 1188 aa17.3■□□□□ 0.36
CACNA1A-227ENST00000636549 MAOBP27338 520 aa17.3■□□□□ 0.36
CACNA1A-227ENST00000636549 AFF1P51825 1210 aaKnown RBP17.3■□□□□ 0.36
CACNA1A-227ENST00000636549 KLF10Q13118 480 aa17.3■□□□□ 0.36
CACNA1A-227ENST00000636549 LASP1Q14847 261 aaKnown RBP17.3■□□□□ 0.36
CACNA1A-227ENST00000636549 ZC3HAV1LQ96H79 300 aaKnown RBP17.3■□□□□ 0.36
CACNA1A-227ENST00000636549 ATG5Q9H1Y0 275 aa17.3■□□□□ 0.36
CACNA1A-227ENST00000636549 SH2B3Q9UQQ2 575 aa17.3■□□□□ 0.36
CACNA1A-227ENST00000636549 FAM170BA6NMN3 283 aa17.3■□□□□ 0.36
CACNA1A-227ENST00000636549 CCNCP24863 283 aa17.3■□□□□ 0.36
CACNA1A-227ENST00000636549 RPS15P62841 145 aaKnown RBP17.3■□□□□ 0.36
CACNA1A-227ENST00000636549 CHRNEQ04844 493 aa17.3■□□□□ 0.36
CACNA1A-227ENST00000636549 SYPL2Q5VXT5 272 aa17.3■□□□□ 0.36
CACNA1A-227ENST00000636549 HAGHLQ6PII5 290 aaPredicted RBP17.3■□□□□ 0.36
CACNA1A-227ENST00000636549 GALNT12Q8IXK2 581 aa17.3■□□□□ 0.36
CACNA1A-227ENST00000636549 PRELID2Q8N945 189 aa17.3■□□□□ 0.36
CACNA1A-227ENST00000636549 CDH22Q9UJ99 828 aa17.3■□□□□ 0.36
CACNA1A-227ENST00000636549 GJD2Q9UKL4 321 aa17.3■□□□□ 0.36
CACNA1A-227ENST00000636549 ZC3H13Q5T200 1668 aaKnown RBP17.3■□□□□ 0.36
CACNA1A-227ENST00000636549 HAS3O00219 553 aa17.29■□□□□ 0.36
CACNA1A-227ENST00000636549 RAD1O60671 282 aa17.29■□□□□ 0.36
CACNA1A-227ENST00000636549 PPM1BO75688 479 aa17.29■□□□□ 0.36
CACNA1A-227ENST00000636549 CSNK2A2P19784 350 aaPredicted RBP17.29■□□□□ 0.36
CACNA1A-227ENST00000636549 PVALBP20472 110 aaPredicted RBP17.29■□□□□ 0.36
CACNA1A-227ENST00000636549 NUDT13Q86X67 352 aa17.29■□□□□ 0.36
CACNA1A-227ENST00000636549 TXNDC5Q8NBS9 432 aaKnown RBP17.29■□□□□ 0.36
CACNA1A-227ENST00000636549 SSX3Q99909 188 aa17.29■□□□□ 0.36
CACNA1A-227ENST00000636549 PCDHGC3Q9UN70 934 aa17.29■□□□□ 0.36
CACNA1A-227ENST00000636549 ZNF12P17014 697 aa17.29■□□□□ 0.36
CACNA1A-227ENST00000636549 NAA10P41227 235 aaPredicted RBP17.29■□□□□ 0.36
CACNA1A-227ENST00000636549 IRF5Q13568 498 aa17.29■□□□□ 0.36
CACNA1A-227ENST00000636549 MFSD13AQ14CX5 517 aa17.29■□□□□ 0.36
CACNA1A-227ENST00000636549 FIGNQ5HY92 759 aa17.29■□□□□ 0.36
CACNA1A-227ENST00000636549 PAQR3Q6TCH7 311 aa17.29■□□□□ 0.36
CACNA1A-227ENST00000636549 FAM234AQ9H0X4 552 aa17.29■□□□□ 0.36
CACNA1A-227ENST00000636549 PCDHAC1Q9H158 963 aa17.29■□□□□ 0.36
CACNA1A-227ENST00000636549 MAGEH1Q9H213 219 aa17.29■□□□□ 0.36
CACNA1A-227ENST00000636549 SLC2A6Q9UGQ3 507 aa17.29■□□□□ 0.36
CACNA1A-227ENST00000636549 NRXN1Q9ULB1 1477 aa17.29■□□□□ 0.36
CACNA1A-227ENST00000636549 TEX13CA0A0J9YWL9 993 aa17.29■□□□□ 0.36
CACNA1A-227ENST00000636549 H7BY64 318 aa17.29■□□□□ 0.36
CACNA1A-227ENST00000636549 ACTL6BO94805 426 aa17.29■□□□□ 0.36
CACNA1A-227ENST00000636549 STK19P49842 368 aaPredicted RBP17.29■□□□□ 0.36
CACNA1A-227ENST00000636549 TBRG1Q3YBR2 411 aa17.29■□□□□ 0.36
CACNA1A-227ENST00000636549 PLD5Q8N7P1 536 aa17.29■□□□□ 0.36
CACNA1A-227ENST00000636549 SLC22A17Q8WUG5 538 aa17.29■□□□□ 0.36
CACNA1A-227ENST00000636549 PRAP1Q96NZ9 151 aa17.29■□□□□ 0.36
CACNA1A-227ENST00000636549 EURLQ9NYK6 297 aa17.29■□□□□ 0.36
CACNA1A-227ENST00000636549 FBXW11Q9UKB1 542 aa17.29■□□□□ 0.36
CACNA1A-227ENST00000636549 ILVBLA1L0T0 632 aa17.29■□□□□ 0.36
CACNA1A-227ENST00000636549 ZNF850A8MQ14 1090 aa17.29■□□□□ 0.36
CACNA1A-227ENST00000636549 IFNGR1P15260 489 aa17.29■□□□□ 0.36
CACNA1A-227ENST00000636549 HMBOX1Q6NT76 420 aa17.29■□□□□ 0.36
CACNA1A-227ENST00000636549 SLC22A18Q96BI1 424 aa17.29■□□□□ 0.36
CACNA1A-227ENST00000636549 TRIM64CA6NLI5 447 aa17.29■□□□□ 0.36
CACNA1A-227ENST00000636549 H3BML4 177 aa17.29■□□□□ 0.36
CACNA1A-227ENST00000636549 CCR3P51677 355 aa17.29■□□□□ 0.36
CACNA1A-227ENST00000636549 EPHA4P54764 986 aa17.29■□□□□ 0.36
CACNA1A-227ENST00000636549 FANK1Q8TC84 345 aa17.29■□□□□ 0.36
CACNA1A-227ENST00000636549 RDH12Q96NR8 316 aa17.29■□□□□ 0.36
CACNA1A-227ENST00000636549 P2RY13Q9BPV8 354 aa17.29■□□□□ 0.36
CACNA1A-227ENST00000636549 HOPXQ9BPY8 73 aaPredicted RBP17.29■□□□□ 0.36
CACNA1A-227ENST00000636549 DEFB126Q9BYW3 111 aa17.29■□□□□ 0.36
CACNA1A-227ENST00000636549 C1orf109Q9NX04 203 aa17.29■□□□□ 0.36
CACNA1A-227ENST00000636549 PADI2Q9Y2J8 665 aa17.29■□□□□ 0.36
CACNA1A-227ENST00000636549 PCDHGA8Q9Y5G5 932 aa17.29■□□□□ 0.36
CACNA1A-227ENST00000636549 PITPNAQ00169 270 aa17.29■□□□□ 0.36
CACNA1A-227ENST00000636549 SCGB1C1Q8TD33 95 aa17.29■□□□□ 0.36
CACNA1A-227ENST00000636549 RASSF5Q8WWW0 418 aa17.29■□□□□ 0.36
CACNA1A-227ENST00000636549 PEX11GQ96HA9 241 aa17.29■□□□□ 0.36
CACNA1A-227ENST00000636549 RNF39Q9H2S5 420 aa17.29■□□□□ 0.36
CACNA1A-227ENST00000636549 LY6G5CQ5SRR4 150 aa17.28■□□□□ 0.36
CACNA1A-227ENST00000636549 CCDC80Q76M96 950 aa17.28■□□□□ 0.36
CACNA1A-227ENST00000636549 AQP11Q8NBQ7 271 aa17.28■□□□□ 0.36
CACNA1A-227ENST00000636549 OR10G2Q8NGC3 310 aa17.28■□□□□ 0.36
CACNA1A-227ENST00000636549 POLDIP3Q9BY77 421 aaKnown RBP17.28■□□□□ 0.36
CACNA1A-227ENST00000636549 SMURF2Q9HAU4 748 aa17.28■□□□□ 0.36
CACNA1A-227ENST00000636549 PRMT8Q9NR22 394 aaPredicted RBP17.28■□□□□ 0.36
CACNA1A-227ENST00000636549 CCRL2O00421 344 aa17.28■□□□□ 0.36
CACNA1A-227ENST00000636549 C4BPAP04003 597 aaKnown RBP17.28■□□□□ 0.36
CACNA1A-227ENST00000636549 HTR1AP08908 422 aa17.28■□□□□ 0.36
CACNA1A-227ENST00000636549 CCNFP41002 786 aa17.28■□□□□ 0.36
CACNA1A-227ENST00000636549 MLLT6P55198 1093 aaPredicted RBP17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms