RNA–Protein interactions for RNA: ENST00000627002.1

PTP4A1-206, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5 BASIC

Gene PTP4A1, Length 447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-206ENST00000627002 ADAM29Q9UKF5 820 aa7.22□□□□□ -1.25
PTP4A1-206ENST00000627002 CROTQ9UKG9 612 aa7.22□□□□□ -1.25
PTP4A1-206ENST00000627002 WBP11Q9Y2W2 641 aaKnown RBP7.22□□□□□ -1.25
PTP4A1-206ENST00000627002 SNX11Q9Y5W9 270 aa7.22□□□□□ -1.25
PTP4A1-206ENST00000627002 PLXND1Q9Y4D7 1925 aa7.22□□□□□ -1.25
PTP4A1-206ENST00000627002 ZFC3H1O60293 1989 aaKnown RBP7.21□□□□□ -1.26
PTP4A1-206ENST00000627002 A0A088AWK7 358 aa7.21□□□□□ -1.26
PTP4A1-206ENST00000627002 C15orf38-AP3S2A0A0A6YYH1 394 aa7.21□□□□□ -1.26
PTP4A1-206ENST00000627002 ARHGAP10A1A4S6 786 aa7.21□□□□□ -1.26
PTP4A1-206ENST00000627002 OR2A25A4D2G3 310 aa7.21□□□□□ -1.26
PTP4A1-206ENST00000627002 RHPN2P1A8MT19 583 aa7.21□□□□□ -1.26
PTP4A1-206ENST00000627002 C9JVG2 144 aa7.21□□□□□ -1.26
PTP4A1-206ENST00000627002 PROB1E7EW31 1015 aa7.21□□□□□ -1.26
PTP4A1-206ENST00000627002 C3orf80F5H4A9 247 aa7.21□□□□□ -1.26
PTP4A1-206ENST00000627002 NDUFS4O43181 175 aa7.21□□□□□ -1.26
PTP4A1-206ENST00000627002 LCMT2O60294 686 aaKnown RBP7.21□□□□□ -1.26
PTP4A1-206ENST00000627002 NOBOXO60393 691 aa7.21□□□□□ -1.26
PTP4A1-206ENST00000627002 SDC3O75056 442 aa7.21□□□□□ -1.26
PTP4A1-206ENST00000627002 RASSF9O75901 435 aa7.21□□□□□ -1.26
PTP4A1-206ENST00000627002 UBXN7O94888 489 aa7.21□□□□□ -1.26
PTP4A1-206ENST00000627002 PGRP06401 933 aa7.21□□□□□ -1.26
PTP4A1-206ENST00000627002 ALPPL2P10696 532 aa7.21□□□□□ -1.26
PTP4A1-206ENST00000627002 DDX5P17844 614 aaKnown RBP7.21□□□□□ -1.26
PTP4A1-206ENST00000627002 TACR1P25103 407 aa7.21□□□□□ -1.26
PTP4A1-206ENST00000627002 S100A3P33764 101 aa7.21□□□□□ -1.26
PTP4A1-206ENST00000627002 BCL6P41182 706 aa7.21□□□□□ -1.26
PTP4A1-206ENST00000627002 TSFMP43897 325 aaKnown RBP7.21□□□□□ -1.26
PTP4A1-206ENST00000627002 ID4P47928 161 aa7.21□□□□□ -1.26
PTP4A1-206ENST00000627002 MTTPP55157 894 aa7.21□□□□□ -1.26
PTP4A1-206ENST00000627002 PSME3P61289 254 aa7.21□□□□□ -1.26
PTP4A1-206ENST00000627002 STXBP1P61764 594 aaKnown RBP7.21□□□□□ -1.26
PTP4A1-206ENST00000627002 TRA2BP62995 288 aaKnown RBP7.21□□□□□ -1.26
PTP4A1-206ENST00000627002 YBX1P67809 324 aaKnown RBP7.21□□□□□ -1.26
PTP4A1-206ENST00000627002 CYP4F2P78329 520 aa7.21□□□□□ -1.26
PTP4A1-206ENST00000627002 RAE1P78406 368 aaKnown RBP7.21□□□□□ -1.26
PTP4A1-206ENST00000627002 SRSF11Q05519 484 aaKnown RBP7.21□□□□□ -1.26
PTP4A1-206ENST00000627002 RGS1Q08116 209 aa7.21□□□□□ -1.26
PTP4A1-206ENST00000627002 TGM3Q08188 693 aa7.21□□□□□ -1.26
PTP4A1-206ENST00000627002 LRRC74AQ0VAA2 488 aa7.21□□□□□ -1.26
PTP4A1-206ENST00000627002 SRSF5Q13243 272 aaKnown RBP7.21□□□□□ -1.26
PTP4A1-206ENST00000627002 NFYCQ13952 458 aa7.21□□□□□ -1.26
PTP4A1-206ENST00000627002 TLR1Q15399 786 aa7.21□□□□□ -1.26
PTP4A1-206ENST00000627002 ZIC1Q15915 447 aa7.21□□□□□ -1.26
PTP4A1-206ENST00000627002 DUOXA1Q1HG43 343 aa7.21□□□□□ -1.26
PTP4A1-206ENST00000627002 DEFB133Q30KQ1 61 aa7.21□□□□□ -1.26
PTP4A1-206ENST00000627002 TRMT5Q32P41 509 aaKnown RBP7.21□□□□□ -1.26
PTP4A1-206ENST00000627002 FAM174BQ3ZCQ3 159 aa7.21□□□□□ -1.26
PTP4A1-206ENST00000627002 SPATS1Q496A3 300 aa7.21□□□□□ -1.26
PTP4A1-206ENST00000627002 TIGD2Q4W5G0 525 aa7.21□□□□□ -1.26
PTP4A1-206ENST00000627002 WASHC2DQ5SRD0 308 aa7.21□□□□□ -1.26
PTP4A1-206ENST00000627002 CCNYL2Q5T2Q4 361 aa7.21□□□□□ -1.26
PTP4A1-206ENST00000627002 C8orf82Q6P1X6 216 aaPredicted RBP7.21□□□□□ -1.26
PTP4A1-206ENST00000627002 CYB5D1Q6P9G0 228 aa7.21□□□□□ -1.26
PTP4A1-206ENST00000627002 PGM2L1Q6PCE3 622 aa7.21□□□□□ -1.26
PTP4A1-206ENST00000627002 FIGLAQ6QHK4 219 aa7.21□□□□□ -1.26
PTP4A1-206ENST00000627002 IKBIPQ70UQ0 350 aa7.21□□□□□ -1.26
PTP4A1-206ENST00000627002 R3HCC1LQ7Z5L2 792 aaKnown RBP7.21□□□□□ -1.26
PTP4A1-206ENST00000627002 NET1Q7Z628 596 aaPredicted RBP7.21□□□□□ -1.26
PTP4A1-206ENST00000627002 ARPINQ7Z6K5 226 aa7.21□□□□□ -1.26
PTP4A1-206ENST00000627002 RIMKLAQ8IXN7 391 aa7.21□□□□□ -1.26
PTP4A1-206ENST00000627002 FBXW8Q8N3Y1 598 aa7.21□□□□□ -1.26
PTP4A1-206ENST00000627002 MINDY1Q8N5J2 469 aa7.21□□□□□ -1.26
PTP4A1-206ENST00000627002 ARL10Q8N8L6 244 aa7.21□□□□□ -1.26
PTP4A1-206ENST00000627002 FAM13CQ8NE31 585 aa7.21□□□□□ -1.26
PTP4A1-206ENST00000627002 GPR156Q8NFN8 814 aa7.21□□□□□ -1.26
PTP4A1-206ENST00000627002 CLHC1Q8NHS4 586 aa7.21□□□□□ -1.26
PTP4A1-206ENST00000627002 NT5CQ8TCD5 201 aa7.21□□□□□ -1.26
PTP4A1-206ENST00000627002 CREB3L4Q8TEY5 395 aa7.21□□□□□ -1.26
PTP4A1-206ENST00000627002 SLC13A3Q8WWT9 602 aa7.21□□□□□ -1.26
PTP4A1-206ENST00000627002 PIGKQ92643 395 aa7.21□□□□□ -1.26
PTP4A1-206ENST00000627002 VPS33AQ96AX1 596 aa7.21□□□□□ -1.26
PTP4A1-206ENST00000627002 TMEM74Q96NL1 305 aa7.21□□□□□ -1.26
PTP4A1-206ENST00000627002 SLC38A3Q99624 504 aa7.21□□□□□ -1.26
PTP4A1-206ENST00000627002 DUSP23Q9BVJ7 150 aa7.21□□□□□ -1.26
PTP4A1-206ENST00000627002 EBPLQ9BY08 206 aa7.21□□□□□ -1.26
PTP4A1-206ENST00000627002 REXO4Q9GZR2 422 aaKnown RBP7.21□□□□□ -1.26
PTP4A1-206ENST00000627002 EPB41L1Q9H4G0 881 aa7.21□□□□□ -1.26
PTP4A1-206ENST00000627002 CAAP1Q9H8G2 361 aa7.21□□□□□ -1.26
PTP4A1-206ENST00000627002 SPAG4Q9NPE6 437 aa7.21□□□□□ -1.26
PTP4A1-206ENST00000627002 PLA2G2EQ9NZK7 142 aa7.21□□□□□ -1.26
PTP4A1-206ENST00000627002 MAP10Q9P2G4 905 aa7.21□□□□□ -1.26
PTP4A1-206ENST00000627002 BAIAP2L1Q9UHR4 511 aa7.21□□□□□ -1.26
PTP4A1-206ENST00000627002 POMT2Q9UKY4 750 aa7.21□□□□□ -1.26
PTP4A1-206ENST00000627002 PCDHGA7Q9Y5G6 932 aa7.21□□□□□ -1.26
PTP4A1-206ENST00000627002 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.21□□□□□ -1.26
PTP4A1-206ENST00000627002 A0A1B0GTQ1 180 aa7.2□□□□□ -1.26
PTP4A1-206ENST00000627002 ASPDHA6ND91 283 aa7.2□□□□□ -1.26
PTP4A1-206ENST00000627002 LRIT2A6NDA9 550 aa7.2□□□□□ -1.26
PTP4A1-206ENST00000627002 URADA6NGE7 173 aa7.2□□□□□ -1.26
PTP4A1-206ENST00000627002 SAP18O00422 153 aaKnown RBP7.2□□□□□ -1.26
PTP4A1-206ENST00000627002 TRIM38O00635 465 aa7.2□□□□□ -1.26
PTP4A1-206ENST00000627002 PLPP1O14494 284 aa7.2□□□□□ -1.26
PTP4A1-206ENST00000627002 SCAMP2O15127 329 aaKnown RBP7.2□□□□□ -1.26
PTP4A1-206ENST00000627002 PPM1DO15297 605 aa7.2□□□□□ -1.26
PTP4A1-206ENST00000627002 CAPN5O15484 640 aaPredicted RBP7.2□□□□□ -1.26
PTP4A1-206ENST00000627002 MAP3K7O43318 606 aa7.2□□□□□ -1.26
PTP4A1-206ENST00000627002 NUDT21O43809 227 aaKnown RBP7.2□□□□□ -1.26
PTP4A1-206ENST00000627002 SH3BGRLO75368 114 aa7.2□□□□□ -1.26
PTP4A1-206ENST00000627002 KCNH1O95259 989 aa7.2□□□□□ -1.26
PTP4A1-206ENST00000627002 SERPIND1P05546 499 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms