RNA–Protein interactions for RNA: ENST00000617185.4

TP53-222, Transcript of tumor protein p53, human

TSL 1 (best) BASIC

Gene TP53, Length 2,724 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TP53-222	ENST00000617185	CHPF	Q8IZ52	775 aa		11.18	□□□□□ -0.62
TP53-222	ENST00000617185	C19orf18	Q8NEA5	215 aa		11.18	□□□□□ -0.62
TP53-222	ENST00000617185	RNF139	Q8WU17	664 aa		11.18	□□□□□ -0.62
TP53-222	ENST00000617185	KIAA1143	Q96AT1	154 aa	Predicted RBP	11.18	□□□□□ -0.62
TP53-222	ENST00000617185	RBP7	Q96R05	134 aa		11.18	□□□□□ -0.62
TP53-222	ENST00000617185	ADAM2	Q99965	735 aa		11.18	□□□□□ -0.62
TP53-222	ENST00000617185	DPYSL5	Q9BPU6	564 aa		11.18	□□□□□ -0.62
TP53-222	ENST00000617185	SIK2	Q9H0K1	926 aa		11.18	□□□□□ -0.62
TP53-222	ENST00000617185	PRDM12	Q9H4Q4	367 aa		11.18	□□□□□ -0.62
TP53-222	ENST00000617185	MID1IP1	Q9NPA3	183 aa		11.18	□□□□□ -0.62
TP53-222	ENST00000617185	DDIT4	Q9NX09	232 aa		11.18	□□□□□ -0.62
TP53-222	ENST00000617185	KLHL8	Q9P2G9	620 aa	Predicted RBP	11.18	□□□□□ -0.62
TP53-222	ENST00000617185	SPAST	Q9UBP0	616 aa		11.18	□□□□□ -0.62
TP53-222	ENST00000617185	FZD10	Q9ULW2	581 aa		11.18	□□□□□ -0.62
TP53-222	ENST00000617185	UBA6	A0AVT1	1052 aa	Predicted RBP	11.17	□□□□□ -0.62
TP53-222	ENST00000617185	PIPSL	A2A3N6	862 aa		11.17	□□□□□ -0.62
TP53-222	ENST00000617185	FAM170B	A6NMN3	283 aa		11.17	□□□□□ -0.62
TP53-222	ENST00000617185	SLC30A4	O14863	429 aa		11.17	□□□□□ -0.62
TP53-222	ENST00000617185	CD3EAP	O15446	510 aa	Known RBP	11.17	□□□□□ -0.62
TP53-222	ENST00000617185	AOC2	O75106	756 aa		11.17	□□□□□ -0.62
TP53-222	ENST00000617185	TSPAN19	P0C672	248 aa		11.17	□□□□□ -0.62
TP53-222	ENST00000617185	PRKAR1A	P10644	381 aa		11.17	□□□□□ -0.62
TP53-222	ENST00000617185	CYBA	P13498	195 aa		11.17	□□□□□ -0.62
TP53-222	ENST00000617185	UNC50	Q53HI1	259 aa		11.17	□□□□□ -0.62
TP53-222	ENST00000617185	MLIP	Q5VWP3	458 aa		11.17	□□□□□ -0.62
TP53-222	ENST00000617185	LRRC66	Q68CR7	880 aa		11.17	□□□□□ -0.62
TP53-222	ENST00000617185	CCDC71	Q8IV32	467 aa	Predicted RBP	11.17	□□□□□ -0.62
TP53-222	ENST00000617185	ZZZ3	Q8IYH5	903 aa		11.17	□□□□□ -0.62
TP53-222	ENST00000617185	LRRC17	Q8N6Y2	441 aa		11.17	□□□□□ -0.62
TP53-222	ENST00000617185	EFHB	Q8N7U6	833 aa		11.17	□□□□□ -0.62
TP53-222	ENST00000617185	CENPI	Q92674	756 aa	Predicted RBP	11.17	□□□□□ -0.62
TP53-222	ENST00000617185	WBP1	Q96G27	269 aa		11.17	□□□□□ -0.62
TP53-222	ENST00000617185	PITX2	Q99697	317 aa		11.17	□□□□□ -0.62
TP53-222	ENST00000617185	P2RY13	Q9BPV8	354 aa		11.17	□□□□□ -0.62
TP53-222	ENST00000617185	REG4	Q9BYZ8	158 aa		11.17	□□□□□ -0.62
TP53-222	ENST00000617185	ZFP64	Q9NPA5	681 aa		11.17	□□□□□ -0.62
TP53-222	ENST00000617185	NLK	Q9UBE8	527 aa		11.17	□□□□□ -0.62
TP53-222	ENST00000617185	CDH23	Q9H251	3354 aa		11.17	□□□□□ -0.62
TP53-222	ENST00000617185	IQCM	A0A1B0GVH7	501 aa		11.17	□□□□□ -0.62
TP53-222	ENST00000617185	MFSD2B	A6NFX1	497 aa		11.17	□□□□□ -0.62
TP53-222	ENST00000617185	SCAMP3	O14828	347 aa	Known RBP	11.17	□□□□□ -0.62
TP53-222	ENST00000617185	B4GALT3	O60512	393 aa		11.17	□□□□□ -0.62
TP53-222	ENST00000617185	SCEL	O95171	688 aa		11.17	□□□□□ -0.62
TP53-222	ENST00000617185	APOL3	O95236	402 aa		11.17	□□□□□ -0.62
TP53-222	ENST00000617185	PTH	P01270	115 aa		11.17	□□□□□ -0.62
TP53-222	ENST00000617185	HLA-E	P13747	358 aa		11.17	□□□□□ -0.62
TP53-222	ENST00000617185	PRKAR2A	P13861	404 aa	Known RBP	11.17	□□□□□ -0.62
TP53-222	ENST00000617185	WARS	P23381	471 aa	Known RBP	11.17	□□□□□ -0.62
TP53-222	ENST00000617185	SP140	Q13342	867 aa		11.17	□□□□□ -0.62
TP53-222	ENST00000617185		Q3ZCU0	254 aa		11.17	□□□□□ -0.62
TP53-222	ENST00000617185	CYP27C1	Q4G0S4	372 aa		11.17	□□□□□ -0.62
TP53-222	ENST00000617185	METTL11B	Q5VVY1	283 aa		11.17	□□□□□ -0.62
TP53-222	ENST00000617185	KANK2	Q63ZY3	851 aa		11.17	□□□□□ -0.62
TP53-222	ENST00000617185	EIF3M	Q7L2H7	374 aa	Known RBP	11.17	□□□□□ -0.62
TP53-222	ENST00000617185	ZNF367	Q7RTV3	350 aa		11.17	□□□□□ -0.62
TP53-222	ENST00000617185	SNX20	Q7Z614	316 aa		11.17	□□□□□ -0.62
TP53-222	ENST00000617185	ADGRD2	Q7Z7M1	963 aa		11.17	□□□□□ -0.62
TP53-222	ENST00000617185	LRRTM3	Q86VH5	581 aa		11.17	□□□□□ -0.62
TP53-222	ENST00000617185	GLCCI1	Q86VQ1	547 aa		11.17	□□□□□ -0.62
TP53-222	ENST00000617185	SPNS2	Q8IVW8	549 aa		11.17	□□□□□ -0.62
TP53-222	ENST00000617185	OR8J3	Q8NGG0	315 aa		11.17	□□□□□ -0.62
TP53-222	ENST00000617185	GPR152	Q8TDT2	470 aa		11.17	□□□□□ -0.62
TP53-222	ENST00000617185	UPRT	Q96BW1	309 aa		11.17	□□□□□ -0.62
TP53-222	ENST00000617185	RADIL	Q96JH8	1075 aa		11.17	□□□□□ -0.62
TP53-222	ENST00000617185	MLPH	Q9BV36	600 aa	Predicted RBP	11.17	□□□□□ -0.62
TP53-222	ENST00000617185	BRINP2	Q9C0B6	783 aa		11.17	□□□□□ -0.62
TP53-222	ENST00000617185	TUBB1	Q9H4B7	451 aa		11.17	□□□□□ -0.62
TP53-222	ENST00000617185	FOLH1B	Q9HBA9	442 aa		11.17	□□□□□ -0.62
TP53-222	ENST00000617185	ZIM2	Q9NZV7	527 aa		11.17	□□□□□ -0.62
TP53-222	ENST00000617185	COPZ2	Q9P299	210 aa		11.17	□□□□□ -0.62
TP53-222	ENST00000617185	PRKAG2	Q9UGJ0	569 aa		11.17	□□□□□ -0.62
TP53-222	ENST00000617185	PCOLCE2	Q9UKZ9	415 aa		11.17	□□□□□ -0.62
TP53-222	ENST00000617185	ABCG2	Q9UNQ0	655 aa		11.17	□□□□□ -0.62
TP53-222	ENST00000617185	PQLC2L	A1A4F0	135 aa		11.16	□□□□□ -0.62
TP53-222	ENST00000617185	WWP2	O00308	870 aa		11.16	□□□□□ -0.62
TP53-222	ENST00000617185	HCN1	O60741	890 aa		11.16	□□□□□ -0.62
TP53-222	ENST00000617185	RHOBTB1	O94844	696 aa		11.16	□□□□□ -0.62
TP53-222	ENST00000617185	ECD	O95905	644 aa	Predicted RBP	11.16	□□□□□ -0.62
TP53-222	ENST00000617185	TPH1	P17752	444 aa		11.16	□□□□□ -0.62
TP53-222	ENST00000617185	HOXA9	P31269	272 aa		11.16	□□□□□ -0.62
TP53-222	ENST00000617185	CLCN4	P51793	760 aa		11.16	□□□□□ -0.62
TP53-222	ENST00000617185	HERVK_113	P63132	956 aa		11.16	□□□□□ -0.62
TP53-222	ENST00000617185	RPP38	P78345	283 aa	Known RBP	11.16	□□□□□ -0.62
TP53-222	ENST00000617185	CSTF3	Q12996	717 aa	Known RBP	11.16	□□□□□ -0.62
TP53-222	ENST00000617185	ETFDH	Q16134	617 aa		11.16	□□□□□ -0.62
TP53-222	ENST00000617185	ATP6AP1L	Q52LC2	224 aa		11.16	□□□□□ -0.62
TP53-222	ENST00000617185	ERICH5	Q6P6B1	374 aa		11.16	□□□□□ -0.62
TP53-222	ENST00000617185	DNAJC22	Q8N4W6	341 aa		11.16	□□□□□ -0.62
TP53-222	ENST00000617185	TOP6BL	Q8N6T0	577 aa		11.16	□□□□□ -0.62
TP53-222	ENST00000617185	CEP76	Q8TAP6	659 aa		11.16	□□□□□ -0.62
TP53-222	ENST00000617185	SOCS4	Q8WXH5	440 aa		11.16	□□□□□ -0.62
TP53-222	ENST00000617185	GGH	Q92820	318 aa		11.16	□□□□□ -0.62
TP53-222	ENST00000617185	POP5	Q969H6	163 aa	Known RBP	11.16	□□□□□ -0.62
TP53-222	ENST00000617185	TBC1D20	Q96BZ9	403 aa		11.16	□□□□□ -0.62
TP53-222	ENST00000617185	DIRAS2	Q96HU8	199 aa		11.16	□□□□□ -0.62
TP53-222	ENST00000617185	RTP3	Q9BQQ7	232 aa		11.16	□□□□□ -0.62
TP53-222	ENST00000617185	CNPPD1	Q9BV87	410 aa		11.16	□□□□□ -0.62
TP53-222	ENST00000617185	ERVK-6	Q9BXR3	956 aa		11.16	□□□□□ -0.62
TP53-222	ENST00000617185	TMEM45A	Q9NWC5	275 aa		11.16	□□□□□ -0.62
TP53-222	ENST00000617185	USP3	Q9Y6I4	520 aa		11.16	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 45 ms