RNA–Protein interactions for RNA: ENST00000616710.4

TNFRSF11A-205, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-205ENST00000616710 TSPEARQ8WU66 669 aa13.55□□□□□ -0.24
TNFRSF11A-205ENST00000616710 AARSD1Q9BTE6 412 aaKnown RBP13.55□□□□□ -0.24
TNFRSF11A-205ENST00000616710 ADGRE3Q9BY15 652 aa13.55□□□□□ -0.24
TNFRSF11A-205ENST00000616710 SLC25A51Q9H1U9 297 aa13.55□□□□□ -0.24
TNFRSF11A-205ENST00000616710 H2AFY2Q9P0M6 372 aaPredicted RBP13.55□□□□□ -0.24
TNFRSF11A-205ENST00000616710 PCDHGB3Q9Y5G1 929 aa13.55□□□□□ -0.24
TNFRSF11A-205ENST00000616710 M0R233 179 aa13.54□□□□□ -0.24
TNFRSF11A-205ENST00000616710 MAFKO60675 156 aa13.54□□□□□ -0.24
TNFRSF11A-205ENST00000616710 ARSBP15848 533 aa13.54□□□□□ -0.24
TNFRSF11A-205ENST00000616710 ALAS2P22557 587 aa13.54□□□□□ -0.24
TNFRSF11A-205ENST00000616710 GALNT1Q10472 559 aaPredicted RBP13.54□□□□□ -0.24
TNFRSF11A-205ENST00000616710 KCTD20Q7Z5Y7 419 aa13.54□□□□□ -0.24
TNFRSF11A-205ENST00000616710 ZMIZ2Q8NF64 920 aa13.54□□□□□ -0.24
TNFRSF11A-205ENST00000616710 RHBDF1Q96CC6 855 aa13.54□□□□□ -0.24
TNFRSF11A-205ENST00000616710 TREX1Q9NSU2 369 aa13.54□□□□□ -0.24
TNFRSF11A-205ENST00000616710 NDRG2Q9UN36 371 aaKnown RBP13.54□□□□□ -0.24
TNFRSF11A-205ENST00000616710 COL18A1P39060 1754 aa13.54□□□□□ -0.24
TNFRSF11A-205ENST00000616710 TLX2O43763 284 aaPredicted RBP13.54□□□□□ -0.24
TNFRSF11A-205ENST00000616710 HPGDSO60760 199 aa13.54□□□□□ -0.24
TNFRSF11A-205ENST00000616710 EGFRP00533 1210 aa13.54□□□□□ -0.24
TNFRSF11A-205ENST00000616710 ESR1P03372 595 aa13.54□□□□□ -0.24
TNFRSF11A-205ENST00000616710 CNR2P34972 360 aa13.54□□□□□ -0.24
TNFRSF11A-205ENST00000616710 CXCL9Q07325 125 aa13.54□□□□□ -0.24
TNFRSF11A-205ENST00000616710 MAD2L1Q13257 205 aaPredicted RBP13.54□□□□□ -0.24
TNFRSF11A-205ENST00000616710 MFSD10Q14728 455 aa13.54□□□□□ -0.24
TNFRSF11A-205ENST00000616710 EXOC3L2Q2M3D2 409 aa13.54□□□□□ -0.24
TNFRSF11A-205ENST00000616710 COQ5Q5HYK3 327 aa13.54□□□□□ -0.24
TNFRSF11A-205ENST00000616710 ATAT1Q5SQI0 421 aa13.54□□□□□ -0.24
TNFRSF11A-205ENST00000616710 FAM151BQ6UXP7 276 aa13.54□□□□□ -0.24
TNFRSF11A-205ENST00000616710 CPA6Q8N4T0 437 aa13.54□□□□□ -0.24
TNFRSF11A-205ENST00000616710 ZNF680Q8NEM1 530 aa13.54□□□□□ -0.24
TNFRSF11A-205ENST00000616710 SLC9A7Q96T83 725 aa13.54□□□□□ -0.24
TNFRSF11A-205ENST00000616710 NUSAP1Q9BXS6 441 aaKnown RBP13.54□□□□□ -0.24
TNFRSF11A-205ENST00000616710 CRLS1Q9UJA2 301 aa13.54□□□□□ -0.24
TNFRSF11A-205ENST00000616710 GJD2Q9UKL4 321 aa13.54□□□□□ -0.24
TNFRSF11A-205ENST00000616710 HCN2Q9UL51 889 aa13.54□□□□□ -0.24
TNFRSF11A-205ENST00000616710 SCN7AQ01118 1682 aa13.54□□□□□ -0.24
TNFRSF11A-205ENST00000616710 MAGEB17A8MXT2 336 aa13.54□□□□□ -0.24
TNFRSF11A-205ENST00000616710 SIGLEC5O15389 551 aa13.54□□□□□ -0.24
TNFRSF11A-205ENST00000616710 RFPL3O75679 317 aa13.54□□□□□ -0.24
TNFRSF11A-205ENST00000616710 BCKDHAP12694 445 aa13.54□□□□□ -0.24
TNFRSF11A-205ENST00000616710 TACR1P25103 407 aa13.54□□□□□ -0.24
TNFRSF11A-205ENST00000616710 CTBP2P56545 445 aa13.54□□□□□ -0.24
TNFRSF11A-205ENST00000616710 LILRA4P59901 499 aa13.54□□□□□ -0.24
TNFRSF11A-205ENST00000616710 SIGLEC14Q08ET2 396 aa13.54□□□□□ -0.24
TNFRSF11A-205ENST00000616710 PPIGQ13427 754 aaKnown RBP eCLIP13.54□□□□□ -0.24
TNFRSF11A-205ENST00000616710 IL20RBQ6UXL0 311 aa13.54□□□□□ -0.24
TNFRSF11A-205ENST00000616710 MICALL2Q8IY33 904 aa13.54□□□□□ -0.24
TNFRSF11A-205ENST00000616710 SRFBP1Q8NEF9 429 aaKnown RBP13.54□□□□□ -0.24
TNFRSF11A-205ENST00000616710 OR2T35Q8NGX2 323 aa13.54□□□□□ -0.24
TNFRSF11A-205ENST00000616710 TRAF4Q9BUZ4 470 aaPredicted RBP13.54□□□□□ -0.24
TNFRSF11A-205ENST00000616710 CIPCQ9C0C6 399 aa13.54□□□□□ -0.24
TNFRSF11A-205ENST00000616710 LINC00597Q9H2U6 94 aa13.54□□□□□ -0.24
TNFRSF11A-205ENST00000616710 MFSD1Q9H3U5 465 aa13.54□□□□□ -0.24
TNFRSF11A-205ENST00000616710 GORASP2Q9H8Y8 452 aa13.54□□□□□ -0.24
TNFRSF11A-205ENST00000616710 PAK6Q9NQU5 681 aaPredicted RBP13.54□□□□□ -0.24
TNFRSF11A-205ENST00000616710 SPATA6Q9NWH7 488 aaPredicted RBP13.54□□□□□ -0.24
TNFRSF11A-205ENST00000616710 PTGFRNQ9P2B2 879 aa13.54□□□□□ -0.24
TNFRSF11A-205ENST00000616710 ZNF639Q9UID6 485 aa13.54□□□□□ -0.24
TNFRSF11A-205ENST00000616710 SLC6A14Q9UN76 642 aa13.54□□□□□ -0.24
TNFRSF11A-205ENST00000616710 J3KTA2 159 aa13.53□□□□□ -0.24
TNFRSF11A-205ENST00000616710 MTRF1O75570 445 aaKnown RBP13.53□□□□□ -0.24
TNFRSF11A-205ENST00000616710 TBX18O95935 607 aa13.53□□□□□ -0.24
TNFRSF11A-205ENST00000616710 OR4Q2P0C623 313 aa13.53□□□□□ -0.24
TNFRSF11A-205ENST00000616710 NR2F6P10588 404 aa13.53□□□□□ -0.24
TNFRSF11A-205ENST00000616710 ACLYP53396 1101 aa13.53□□□□□ -0.24
TNFRSF11A-205ENST00000616710 TSPAN5P62079 268 aa13.53□□□□□ -0.24
TNFRSF11A-205ENST00000616710 TBCEQ15813 527 aaPredicted RBP13.53□□□□□ -0.24
TNFRSF11A-205ENST00000616710 PIK3R6Q5UE93 754 aa13.53□□□□□ -0.24
TNFRSF11A-205ENST00000616710 SAXO2Q658L1 398 aa13.53□□□□□ -0.24
TNFRSF11A-205ENST00000616710 CATSPERGQ6ZRH7 1159 aa13.53□□□□□ -0.24
TNFRSF11A-205ENST00000616710 PDZD3Q86UT5 571 aa13.53□□□□□ -0.24
TNFRSF11A-205ENST00000616710 FTMTQ8N4E7 242 aa13.53□□□□□ -0.24
TNFRSF11A-205ENST00000616710 DNAJA4Q8WW22 397 aaPredicted RBP13.53□□□□□ -0.24
TNFRSF11A-205ENST00000616710 GATAD2BQ8WXI9 593 aa13.53□□□□□ -0.24
TNFRSF11A-205ENST00000616710 ST8SIA4Q92187 359 aa13.53□□□□□ -0.24
TNFRSF11A-205ENST00000616710 SH3KBP1Q96B97 665 aa13.53□□□□□ -0.24
TNFRSF11A-205ENST00000616710 PPP1R2P1Q96PQ5 205 aa13.53□□□□□ -0.24
TNFRSF11A-205ENST00000616710 UBQLN2Q9UHD9 624 aa13.53□□□□□ -0.24
TNFRSF11A-205ENST00000616710 PCDHGA6Q9Y5G7 932 aa13.53□□□□□ -0.24
TNFRSF11A-205ENST00000616710 COL22A1Q8NFW1 1626 aaPredicted RBP13.53□□□□□ -0.24
TNFRSF11A-205ENST00000616710 TRIM64BA6NI03 449 aa13.53□□□□□ -0.24
TNFRSF11A-205ENST00000616710 CSF3P09919 207 aa13.53□□□□□ -0.24
TNFRSF11A-205ENST00000616710 BOP1Q14137 746 aaKnown RBP13.53□□□□□ -0.24
TNFRSF11A-205ENST00000616710 KEAP1Q14145 624 aa13.53□□□□□ -0.24
TNFRSF11A-205ENST00000616710 SLC27A1Q6PCB7 646 aa13.53□□□□□ -0.24
TNFRSF11A-205ENST00000616710 C11orf96Q7Z7L8 435 aa13.53□□□□□ -0.24
TNFRSF11A-205ENST00000616710 PGBD5Q8N414 524 aa13.53□□□□□ -0.24
TNFRSF11A-205ENST00000616710 KAT2AQ92830 837 aa13.53□□□□□ -0.24
TNFRSF11A-205ENST00000616710 LPPQ93052 612 aa13.53□□□□□ -0.24
TNFRSF11A-205ENST00000616710 KCTD7Q96MP8 289 aa13.53□□□□□ -0.24
TNFRSF11A-205ENST00000616710 NIPSNAP1Q9BPW8 284 aa13.53□□□□□ -0.24
TNFRSF11A-205ENST00000616710 POLR1EQ9GZS1 481 aaKnown RBP13.53□□□□□ -0.24
TNFRSF11A-205ENST00000616710 SAP130Q9H0E3 1048 aa13.53□□□□□ -0.24
TNFRSF11A-205ENST00000616710 PSORS1C1Q9UIG5 152 aa13.53□□□□□ -0.24
TNFRSF11A-205ENST00000616710 C2orf92A0A1B0GVN3 265 aa13.53□□□□□ -0.24
TNFRSF11A-205ENST00000616710 FFAR2O15552 330 aa13.53□□□□□ -0.24
TNFRSF11A-205ENST00000616710 EEF1E1O43324 174 aaKnown RBP13.53□□□□□ -0.24
TNFRSF11A-205ENST00000616710 VIPR1P32241 457 aa13.53□□□□□ -0.24
TNFRSF11A-205ENST00000616710 CRYZQ08257 329 aaKnown RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms