RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, human

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-231	ENST00000616390	PLAGL1	Q9UM63	463 aa		13.38	□□□□□ -0.27
CACNA1C-231	ENST00000616390	AP3M1	Q9Y2T2	418 aa		13.38	□□□□□ -0.27
CACNA1C-231	ENST00000616390	GMPPB	Q9Y5P6	360 aa		13.38	□□□□□ -0.27
CACNA1C-231	ENST00000616390	CARNS1	A5YM72	827 aa		13.37	□□□□□ -0.27
CACNA1C-231	ENST00000616390	TOR1B	O14657	336 aa		13.37	□□□□□ -0.27
CACNA1C-231	ENST00000616390	SEC14L2	O76054	403 aa		13.37	□□□□□ -0.27
CACNA1C-231	ENST00000616390	ARHGEF15	O94989	841 aa		13.37	□□□□□ -0.27
CACNA1C-231	ENST00000616390	TIMP1	P01033	207 aa		13.37	□□□□□ -0.27
CACNA1C-231	ENST00000616390	GSTT2	P0CG29	244 aa		13.37	□□□□□ -0.27
CACNA1C-231	ENST00000616390	GSTT2B	P0CG30	244 aa		13.37	□□□□□ -0.27
CACNA1C-231	ENST00000616390	ACPP	P15309	386 aa		13.37	□□□□□ -0.27
CACNA1C-231	ENST00000616390	CTNNB1	P35222	781 aa		13.37	□□□□□ -0.27
CACNA1C-231	ENST00000616390	OR1E2	P47887	323 aa		13.37	□□□□□ -0.27
CACNA1C-231	ENST00000616390	RAE1	P78406	368 aa	Known RBP	13.37	□□□□□ -0.27
CACNA1C-231	ENST00000616390	RAET1G	Q6H3X3	334 aa		13.37	□□□□□ -0.27
CACNA1C-231	ENST00000616390	ZNF852	Q6ZMS4	543 aa		13.37	□□□□□ -0.27
CACNA1C-231	ENST00000616390		Q6ZPB1	254 aa	Predicted RBP	13.37	□□□□□ -0.27
CACNA1C-231	ENST00000616390	SERPINA11	Q86U17	422 aa		13.37	□□□□□ -0.27
CACNA1C-231	ENST00000616390	C12orf40	Q86WS4	652 aa		13.37	□□□□□ -0.27
CACNA1C-231	ENST00000616390	PIK3C3	Q8NEB9	887 aa		13.37	□□□□□ -0.27
CACNA1C-231	ENST00000616390	SPPL2A	Q8TCT8	520 aa		13.37	□□□□□ -0.27
CACNA1C-231	ENST00000616390	TANK	Q92844	425 aa		13.37	□□□□□ -0.27
CACNA1C-231	ENST00000616390	ASPSCR1	Q9BZE9	553 aa		13.37	□□□□□ -0.27
CACNA1C-231	ENST00000616390	USE1	Q9NZ43	259 aa		13.37	□□□□□ -0.27
CACNA1C-231	ENST00000616390	CXXC1	Q9P0U4	656 aa	Predicted RBP	13.37	□□□□□ -0.27
CACNA1C-231	ENST00000616390	PLXND1	Q9Y4D7	1925 aa		13.37	□□□□□ -0.27
CACNA1C-231	ENST00000616390	SZT2	Q5T011	3432 aa		13.37	□□□□□ -0.27
CACNA1C-231	ENST00000616390	WASH3P	C4AMC7	463 aa		13.37	□□□□□ -0.27
CACNA1C-231	ENST00000616390	PRPH2	P23942	346 aa		13.37	□□□□□ -0.27
CACNA1C-231	ENST00000616390	GSTM2	P28161	218 aa		13.37	□□□□□ -0.27
CACNA1C-231	ENST00000616390	HTR1B	P28222	390 aa		13.37	□□□□□ -0.27
CACNA1C-231	ENST00000616390	IRS1	P35568	1242 aa		13.37	□□□□□ -0.27
CACNA1C-231	ENST00000616390	CLK3	P49761	638 aa	Known RBP	13.37	□□□□□ -0.27
CACNA1C-231	ENST00000616390	CSTF3	Q12996	717 aa	Known RBP	13.37	□□□□□ -0.27
CACNA1C-231	ENST00000616390	GAB1	Q13480	694 aa		13.37	□□□□□ -0.27
CACNA1C-231	ENST00000616390	SHQ1	Q6PI26	577 aa	Known RBP	13.37	□□□□□ -0.27
CACNA1C-231	ENST00000616390	PIWIL3	Q7Z3Z3	882 aa	Known RBP	13.37	□□□□□ -0.27
CACNA1C-231	ENST00000616390	TTC29	Q8NA56	475 aa	Predicted RBP	13.37	□□□□□ -0.27
CACNA1C-231	ENST00000616390	ZNF480	Q8WV37	535 aa		13.37	□□□□□ -0.27
CACNA1C-231	ENST00000616390	POF1B	Q8WVV4	589 aa		13.37	□□□□□ -0.27
CACNA1C-231	ENST00000616390	RDH12	Q96NR8	316 aa		13.37	□□□□□ -0.27
CACNA1C-231	ENST00000616390	LRRC3B	Q96PB8	259 aa		13.37	□□□□□ -0.27
CACNA1C-231	ENST00000616390	POLM	Q9NP87	494 aa	Predicted RBP	13.37	□□□□□ -0.27
CACNA1C-231	ENST00000616390	SPAST	Q9UBP0	616 aa		13.37	□□□□□ -0.27
CACNA1C-231	ENST00000616390	ACSL6	Q9UKU0	697 aa		13.37	□□□□□ -0.27
CACNA1C-231	ENST00000616390	PCDHGB3	Q9Y5G1	929 aa		13.37	□□□□□ -0.27
CACNA1C-231	ENST00000616390	KCNE2	Q9Y6J6	123 aa		13.37	□□□□□ -0.27
CACNA1C-231	ENST00000616390	TCF20	Q9UGU0	1960 aa	Known RBP	13.37	□□□□□ -0.27
CACNA1C-231	ENST00000616390	LRRK1	Q38SD2	2015 aa		13.37	□□□□□ -0.27
CACNA1C-231	ENST00000616390	PRSS47	A8MTI9	375 aa		13.36	□□□□□ -0.27
CACNA1C-231	ENST00000616390		M0QX08	132 aa		13.36	□□□□□ -0.27
CACNA1C-231	ENST00000616390	ZNF701	M0R085	212 aa	Predicted RBP	13.36	□□□□□ -0.27
CACNA1C-231	ENST00000616390	SCAMP2	O15127	329 aa	Known RBP	13.36	□□□□□ -0.27
CACNA1C-231	ENST00000616390	PCDH7	O60245	1069 aa		13.36	□□□□□ -0.27
CACNA1C-231	ENST00000616390	VIPR2	P41587	438 aa		13.36	□□□□□ -0.27
CACNA1C-231	ENST00000616390	DGKG	P49619	791 aa		13.36	□□□□□ -0.27
CACNA1C-231	ENST00000616390	ST8SIA6	P61647	398 aa		13.36	□□□□□ -0.27
CACNA1C-231	ENST00000616390	TBPL1	P62380	186 aa		13.36	□□□□□ -0.27
CACNA1C-231	ENST00000616390	MTAP	Q13126	283 aa		13.36	□□□□□ -0.27
CACNA1C-231	ENST00000616390	SPCS2	Q15005	226 aa		13.36	□□□□□ -0.27
CACNA1C-231	ENST00000616390	LAIR1	Q6GTX8	287 aa		13.36	□□□□□ -0.27
CACNA1C-231	ENST00000616390	ERAP2	Q6P179	960 aa		13.36	□□□□□ -0.27
CACNA1C-231	ENST00000616390	GALNT18	Q6P9A2	607 aa		13.36	□□□□□ -0.27
CACNA1C-231	ENST00000616390	TTC23L	Q6PF05	361 aa		13.36	□□□□□ -0.27
CACNA1C-231	ENST00000616390	SFTPA1	Q8IWL2	248 aa		13.36	□□□□□ -0.27
CACNA1C-231	ENST00000616390	ATL1	Q8WXF7	558 aa		13.36	□□□□□ -0.27
CACNA1C-231	ENST00000616390	CIDEC	Q96AQ7	238 aa	Predicted RBP	13.36	□□□□□ -0.27
CACNA1C-231	ENST00000616390	IL17F	Q96PD4	163 aa		13.36	□□□□□ -0.27
CACNA1C-231	ENST00000616390	KRT84	Q9NSB2	600 aa		13.36	□□□□□ -0.27
CACNA1C-231	ENST00000616390	SPATA6	Q9NWH7	488 aa	Predicted RBP	13.36	□□□□□ -0.27
CACNA1C-231	ENST00000616390	RPS6KA6	Q9UK32	745 aa		13.36	□□□□□ -0.27
CACNA1C-231	ENST00000616390	TESMIN	Q9Y4I5	508 aa		13.36	□□□□□ -0.27
CACNA1C-231	ENST00000616390	PCDHB11	Q9Y5F2	797 aa		13.36	□□□□□ -0.27
CACNA1C-231	ENST00000616390	CFAP20	Q9Y6A4	193 aa	Known RBP	13.36	□□□□□ -0.27
CACNA1C-231	ENST00000616390	MTCL1	Q9Y4B5	1905 aa	Known RBP	13.36	□□□□□ -0.27
CACNA1C-231	ENST00000616390	MMP20	O60882	483 aa		13.36	□□□□□ -0.27
CACNA1C-231	ENST00000616390	EMX1	Q04741	257 aa	Predicted RBP	13.36	□□□□□ -0.27
CACNA1C-231	ENST00000616390	ZNF385B	Q569K4	471 aa		13.36	□□□□□ -0.27
CACNA1C-231	ENST00000616390	COX20	Q5RI15	118 aa		13.36	□□□□□ -0.27
CACNA1C-231	ENST00000616390	GRHL2	Q6ISB3	625 aa		13.36	□□□□□ -0.27
CACNA1C-231	ENST00000616390	TECPR1	Q7Z6L1	1165 aa		13.36	□□□□□ -0.27
CACNA1C-231	ENST00000616390	GALNT6	Q8NCL4	622 aa		13.36	□□□□□ -0.27
CACNA1C-231	ENST00000616390	ZNF740	Q8NDX6	193 aa		13.36	□□□□□ -0.27
CACNA1C-231	ENST00000616390	VN1R2	Q8NFZ6	395 aa		13.36	□□□□□ -0.27
CACNA1C-231	ENST00000616390	GLMN	Q92990	594 aa		13.36	□□□□□ -0.27
CACNA1C-231	ENST00000616390	DOK1	Q99704	481 aa		13.36	□□□□□ -0.27
CACNA1C-231	ENST00000616390	TUBA1C	Q9BQE3	449 aa		13.36	□□□□□ -0.27
CACNA1C-231	ENST00000616390	SORBS1	Q9BX66	1292 aa	Known RBP	13.36	□□□□□ -0.27
CACNA1C-231	ENST00000616390	REEP1	Q9H902	201 aa		13.36	□□□□□ -0.27
CACNA1C-231	ENST00000616390	AMBN	Q9NP70	447 aa		13.36	□□□□□ -0.27
CACNA1C-231	ENST00000616390	SIRT5	Q9NXA8	310 aa		13.36	□□□□□ -0.27
CACNA1C-231	ENST00000616390	PNMA8B	Q9ULN7	279 aa	Predicted RBP	13.36	□□□□□ -0.27
CACNA1C-231	ENST00000616390	PTPRS	Q13332	1948 aa		13.36	□□□□□ -0.27
CACNA1C-231	ENST00000616390	ETFA	P13804	333 aa		13.35	□□□□□ -0.27
CACNA1C-231	ENST00000616390	CEBPB	P17676	345 aa		13.35	□□□□□ -0.27
CACNA1C-231	ENST00000616390	GPX2	P18283	190 aa		13.35	□□□□□ -0.27
CACNA1C-231	ENST00000616390	SLBP	Q14493	270 aa	Known RBP eCLIP	13.35	□□□□□ -0.27
CACNA1C-231	ENST00000616390	DHCR24	Q15392	516 aa		13.35	□□□□□ -0.27
CACNA1C-231	ENST00000616390	ZNF77	Q15935	545 aa		13.35	□□□□□ -0.27
CACNA1C-231	ENST00000616390	ZNF540	Q8NDQ6	660 aa		13.35	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms