RNA–Protein interactions for RNA: ENST00000600499.5

LTBP4-228, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 2

Gene LTBP4, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-228ENST00000600499 KIAA1143Q96AT1 154 aaPredicted RBP13.89□□□□□ -0.19
LTBP4-228ENST00000600499 MOCOSQ96EN8 888 aa13.89□□□□□ -0.19
LTBP4-228ENST00000600499 MAGEB10Q96LZ2 347 aaPredicted RBP13.89□□□□□ -0.19
LTBP4-228ENST00000600499 TMEM237Q96Q45 408 aa13.89□□□□□ -0.19
LTBP4-228ENST00000600499 SMC6Q96SB8 1091 aa13.89□□□□□ -0.19
LTBP4-228ENST00000600499 GPN2Q9H9Y4 310 aaPredicted RBP13.89□□□□□ -0.19
LTBP4-228ENST00000600499 CLK4Q9HAZ1 481 aaKnown RBP13.89□□□□□ -0.19
LTBP4-228ENST00000600499 OXSMQ9NWU1 459 aa13.89□□□□□ -0.19
LTBP4-228ENST00000600499 IRAK4Q9NWZ3 460 aa13.89□□□□□ -0.19
LTBP4-228ENST00000600499 ADGRE2Q9UHX3 823 aa13.89□□□□□ -0.19
LTBP4-228ENST00000600499 PPT2Q9UMR5 302 aa13.89□□□□□ -0.19
LTBP4-228ENST00000600499 CDC14AQ9UNH5 594 aa13.89□□□□□ -0.19
LTBP4-228ENST00000600499 FARSAQ9Y285 508 aaKnown RBP13.89□□□□□ -0.19
LTBP4-228ENST00000600499 ANGPTL3Q9Y5C1 460 aa13.89□□□□□ -0.19
LTBP4-228ENST00000600499 VSTM2BA6NLU5 285 aa13.88□□□□□ -0.19
LTBP4-228ENST00000600499 NDUFS4O43181 175 aa13.88□□□□□ -0.19
LTBP4-228ENST00000600499 KLF7O75840 302 aaPredicted RBP13.88□□□□□ -0.19
LTBP4-228ENST00000600499 MYL2P10916 166 aa13.88□□□□□ -0.19
LTBP4-228ENST00000600499 CPA3P15088 417 aa13.88□□□□□ -0.19
LTBP4-228ENST00000600499 CREB1P16220 341 aa13.88□□□□□ -0.19
LTBP4-228ENST00000600499 ALAS2P22557 587 aa13.88□□□□□ -0.19
LTBP4-228ENST00000600499 PTPN4P29074 926 aa13.88□□□□□ -0.19
LTBP4-228ENST00000600499 PIK3CBP42338 1070 aa13.88□□□□□ -0.19
LTBP4-228ENST00000600499 ETV4P43268 484 aa13.88□□□□□ -0.19
LTBP4-228ENST00000600499 TMPRSS3P57727 454 aa13.88□□□□□ -0.19
LTBP4-228ENST00000600499 CLCQ05315 142 aa13.88□□□□□ -0.19
LTBP4-228ENST00000600499 RGS1Q08116 209 aa13.88□□□□□ -0.19
LTBP4-228ENST00000600499 SRSF6Q13247 344 aaKnown RBP13.88□□□□□ -0.19
LTBP4-228ENST00000600499 DSG2Q14126 1118 aa13.88□□□□□ -0.19
LTBP4-228ENST00000600499 HERC3Q15034 1050 aa13.88□□□□□ -0.19
LTBP4-228ENST00000600499 NCF4Q15080 339 aa13.88□□□□□ -0.19
LTBP4-228ENST00000600499 RBBP5Q15291 538 aaKnown RBP13.88□□□□□ -0.19
LTBP4-228ENST00000600499 C10orf62Q5T681 223 aaPredicted RBP13.88□□□□□ -0.19
LTBP4-228ENST00000600499 NIPAL1Q6NVV3 410 aa13.88□□□□□ -0.19
LTBP4-228ENST00000600499 OVCH1Q7RTY7 1134 aa13.88□□□□□ -0.19
LTBP4-228ENST00000600499 VASH2Q86V25 355 aa13.88□□□□□ -0.19
LTBP4-228ENST00000600499 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.88□□□□□ -0.194e-7■■■■■ 240.2
LTBP4-228ENST00000600499 OR7G3Q8NG95 312 aa13.88□□□□□ -0.19
LTBP4-228ENST00000600499 OR52B6Q8NGF0 335 aa13.88□□□□□ -0.19
LTBP4-228ENST00000600499 ZNF473Q8WTR7 871 aaKnown RBP13.88□□□□□ -0.19
LTBP4-228ENST00000600499 NSUN5Q96P11 429 aaKnown RBP13.88□□□□□ -0.19
LTBP4-228ENST00000600499 AICDAQ9GZX7 198 aa13.88□□□□□ -0.19
LTBP4-228ENST00000600499 DRC3Q9H069 523 aa13.88□□□□□ -0.19
LTBP4-228ENST00000600499 NOL11Q9H8H0 719 aaKnown RBP13.88□□□□□ -0.19
LTBP4-228ENST00000600499 WDR54Q9H977 334 aa13.88□□□□□ -0.19
LTBP4-228ENST00000600499 VIPAS39Q9H9C1 493 aa13.88□□□□□ -0.19
LTBP4-228ENST00000600499 ZNF304Q9HCX3 659 aa13.88□□□□□ -0.19
LTBP4-228ENST00000600499 ARGLU1Q9NWB6 273 aaPredicted RBP13.88□□□□□ -0.19
LTBP4-228ENST00000600499 IL17BQ9UHF5 180 aa13.88□□□□□ -0.19
LTBP4-228ENST00000600499 ZNF225Q9UK10 706 aa13.88□□□□□ -0.19
LTBP4-228ENST00000600499 MRPS2Q9Y399 296 aaKnown RBP13.88□□□□□ -0.19
LTBP4-228ENST00000600499 PCDHGA11Q9Y5H2 935 aa13.88□□□□□ -0.19
LTBP4-228ENST00000600499 CFAP47Q6ZTR5 3102 aa13.87□□□□□ -0.19
LTBP4-228ENST00000600499 LRIT2A6NDA9 550 aa13.87□□□□□ -0.19
LTBP4-228ENST00000600499 URADA6NGE7 173 aa13.87□□□□□ -0.19
LTBP4-228ENST00000600499 AGPSO00116 658 aa13.87□□□□□ -0.19
LTBP4-228ENST00000600499 PRPF4O43172 522 aaKnown RBP eCLIP13.87□□□□□ -0.195e-6■□□□□ 8.1
LTBP4-228ENST00000600499 CNOT3O75175 753 aaKnown RBP13.87□□□□□ -0.19
LTBP4-228ENST00000600499 CLDN9O95484 217 aa13.87□□□□□ -0.19
LTBP4-228ENST00000600499 OTCP00480 354 aa13.87□□□□□ -0.19
LTBP4-228ENST00000600499 HPDP32754 393 aaPredicted RBP13.87□□□□□ -0.19
LTBP4-228ENST00000600499 ARFIP1P53367 373 aa13.87□□□□□ -0.19
LTBP4-228ENST00000600499 RPS15P62841 145 aaKnown RBP13.87□□□□□ -0.19
LTBP4-228ENST00000600499 VAC14Q08AM6 782 aa13.87□□□□□ -0.19
LTBP4-228ENST00000600499 C1orf189Q5VU69 101 aa13.87□□□□□ -0.19
LTBP4-228ENST00000600499 MED27Q6P2C8 311 aa13.87□□□□□ -0.19
LTBP4-228ENST00000600499 CCDC81Q6ZN84 652 aa13.87□□□□□ -0.19
LTBP4-228ENST00000600499 MED25Q71SY5 747 aa13.87□□□□□ -0.19
LTBP4-228ENST00000600499 AMER3Q8N944 861 aa13.87□□□□□ -0.19
LTBP4-228ENST00000600499 WDR20Q8TBZ3 569 aa13.87□□□□□ -0.19
LTBP4-228ENST00000600499 TCP10LQ8TDR4 215 aa13.87□□□□□ -0.19
LTBP4-228ENST00000600499 UTP15Q8TED0 518 aaKnown RBP13.87□□□□□ -0.19
LTBP4-228ENST00000600499 NACC2Q96BF6 587 aa13.87□□□□□ -0.19
LTBP4-228ENST00000600499 RNF31Q96EP0 1072 aa13.87□□□□□ -0.19
LTBP4-228ENST00000600499 ZNF382Q96SR6 550 aa13.87□□□□□ -0.19
LTBP4-228ENST00000600499 MACROD1Q9BQ69 325 aa13.87□□□□□ -0.19
LTBP4-228ENST00000600499 TGIF2Q9GZN2 237 aa13.87□□□□□ -0.19
LTBP4-228ENST00000600499 C12orf65Q9H3J6 166 aaKnown RBP13.87□□□□□ -0.19
LTBP4-228ENST00000600499 GSTO2Q9H4Y5 243 aa13.87□□□□□ -0.19
LTBP4-228ENST00000600499 PRORYQ9H606 182 aa13.87□□□□□ -0.19
LTBP4-228ENST00000600499 ACTR8Q9H981 624 aa13.87□□□□□ -0.19
LTBP4-228ENST00000600499 TMBIM4Q9HC24 238 aa13.87□□□□□ -0.19
LTBP4-228ENST00000600499 TCFL5Q9UL49 500 aa13.87□□□□□ -0.19
LTBP4-228ENST00000600499 STK38LQ9Y2H1 464 aa13.87□□□□□ -0.19
LTBP4-228ENST00000600499 RNF11Q9Y3C5 154 aa13.87□□□□□ -0.19
LTBP4-228ENST00000600499 MAP4K5Q9Y4K4 846 aa13.87□□□□□ -0.19
LTBP4-228ENST00000600499 ANKDD1BA6NHY2 528 aa13.86□□□□□ -0.19
LTBP4-228ENST00000600499 C9J4A7 227 aa13.86□□□□□ -0.19
LTBP4-228ENST00000600499 H3BQF6 201 aa13.86□□□□□ -0.19
LTBP4-228ENST00000600499 FOXE1O00358 373 aaPredicted RBP13.86□□□□□ -0.19
LTBP4-228ENST00000600499 PPP6CO00743 305 aa13.86□□□□□ -0.19
LTBP4-228ENST00000600499 GALR3O60755 368 aaPredicted RBP13.86□□□□□ -0.19
LTBP4-228ENST00000600499 CREG1O75629 220 aa13.86□□□□□ -0.19
LTBP4-228ENST00000600499 SUPT7LO94864 414 aa13.86□□□□□ -0.19
LTBP4-228ENST00000600499 MLYCDO95822 493 aa13.86□□□□□ -0.19
LTBP4-228ENST00000600499 MYZAPP0CAP1 466 aa13.86□□□□□ -0.19
LTBP4-228ENST00000600499 ALOX12P18054 663 aa13.86□□□□□ -0.19
LTBP4-228ENST00000600499 CCNG1P51959 295 aa13.86□□□□□ -0.19
LTBP4-228ENST00000600499 SLC18A1P54219 525 aa13.86□□□□□ -0.19
LTBP4-228ENST00000600499 CDH13P55290 713 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms