RNA–Protein interactions for RNA: ENST00000597453.1

TGFB1-202, Transcript of transforming growth factor beta 1, humanhuman

TSL 1 (best)

Gene TGFB1, Length 392 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-202ENST00000597453 VN1R1Q9GZP7 353 aa14.33□□□□□ -0.12
TGFB1-202ENST00000597453 L2HGDHQ9H9P8 463 aa14.33□□□□□ -0.12
TGFB1-202ENST00000597453 SMYD2Q9NRG4 433 aa14.33□□□□□ -0.12
TGFB1-202ENST00000597453 OLAHQ9NV23 265 aa14.33□□□□□ -0.12
TGFB1-202ENST00000597453 HCN3Q9P1Z3 774 aa14.33□□□□□ -0.12
TGFB1-202ENST00000597453 MTRF1LQ9UGC7 380 aaKnown RBP14.33□□□□□ -0.12
TGFB1-202ENST00000597453 CREBBPQ92793 2442 aa14.32□□□□□ -0.12
TGFB1-202ENST00000597453 TRAV17A0A0B4J275 112 aa14.32□□□□□ -0.12
TGFB1-202ENST00000597453 FAM159BA6NKW6 160 aa14.32□□□□□ -0.12
TGFB1-202ENST00000597453 SGK494L7N484 410 aa14.32□□□□□ -0.12
TGFB1-202ENST00000597453 WFS1O76024 890 aa14.32□□□□□ -0.12
TGFB1-202ENST00000597453 SEC24DO94855 1032 aaPredicted RBP14.32□□□□□ -0.12
TGFB1-202ENST00000597453 WDPCPO95876 746 aa14.32□□□□□ -0.12
TGFB1-202ENST00000597453 C8GP07360 202 aa14.32□□□□□ -0.12
TGFB1-202ENST00000597453 UQCRHP07919 91 aa14.32□□□□□ -0.12
TGFB1-202ENST00000597453 HRH2P25021 359 aa14.32□□□□□ -0.12
TGFB1-202ENST00000597453 STX2P32856 288 aa14.32□□□□□ -0.12
TGFB1-202ENST00000597453 BCL6P41182 706 aa14.32□□□□□ -0.12
TGFB1-202ENST00000597453 RGS4P49798 205 aa14.32□□□□□ -0.12
TGFB1-202ENST00000597453 TDGF1P3P51864 188 aa14.32□□□□□ -0.12
TGFB1-202ENST00000597453 PDAP1Q13442 181 aaKnown RBP14.32□□□□□ -0.12
TGFB1-202ENST00000597453 NAE1Q13564 534 aa14.32□□□□□ -0.12
TGFB1-202ENST00000597453 MINDY4Q4G0A6 757 aa14.32□□□□□ -0.12
TGFB1-202ENST00000597453 ZNF324BQ6AW86 544 aaPredicted RBP14.32□□□□□ -0.12
TGFB1-202ENST00000597453 PDSS2Q86YH6 399 aa14.32□□□□□ -0.12
TGFB1-202ENST00000597453 RELL1Q8IUW5 271 aa14.32□□□□□ -0.12
TGFB1-202ENST00000597453 BCORP1Q8N888 145 aa14.32□□□□□ -0.12
TGFB1-202ENST00000597453 KCT2Q8NC54 265 aa14.32□□□□□ -0.12
TGFB1-202ENST00000597453 OR51Q1Q8NH59 317 aa14.32□□□□□ -0.12
TGFB1-202ENST00000597453 ZCCHC10Q8TBK6 192 aa14.32□□□□□ -0.12
TGFB1-202ENST00000597453 ALKBH8Q96BT7 664 aaKnown RBP14.32□□□□□ -0.12
TGFB1-202ENST00000597453 TM4SF19Q96DZ7 209 aa14.32□□□□□ -0.12
TGFB1-202ENST00000597453 LINGO1Q96FE5 620 aa14.32□□□□□ -0.12
TGFB1-202ENST00000597453 FMO2Q99518 471 aa14.32□□□□□ -0.12
TGFB1-202ENST00000597453 TUBB6Q9BUF5 446 aa14.32□□□□□ -0.12
TGFB1-202ENST00000597453 SGPP1Q9BX95 441 aa14.32□□□□□ -0.12
TGFB1-202ENST00000597453 TSPYL1Q9H0U9 437 aa14.32□□□□□ -0.12
TGFB1-202ENST00000597453 RHOJQ9H4E5 214 aa14.32□□□□□ -0.12
TGFB1-202ENST00000597453 PARVBQ9HBI1 364 aa14.32□□□□□ -0.12
TGFB1-202ENST00000597453 VWA7Q9Y334 891 aa14.32□□□□□ -0.12
TGFB1-202ENST00000597453 MYO7BQ6PIF6 2116 aa14.32□□□□□ -0.12
TGFB1-202ENST00000597453 FAM95CA0A1B0GW59 222 aa14.31□□□□□ -0.12
TGFB1-202ENST00000597453 CXorf49A8MYA2 514 aaPredicted RBP14.31□□□□□ -0.12
TGFB1-202ENST00000597453 LCMT2O60294 686 aaKnown RBP14.31□□□□□ -0.12
TGFB1-202ENST00000597453 TSPAN12O95859 305 aa14.31□□□□□ -0.12
TGFB1-202ENST00000597453 C1QAP02745 245 aa14.31□□□□□ -0.12
TGFB1-202ENST00000597453 CDH1P12830 882 aa14.31□□□□□ -0.12
TGFB1-202ENST00000597453 NPPBP16860 134 aa14.31□□□□□ -0.12
TGFB1-202ENST00000597453 ECHS1P30084 290 aa14.31□□□□□ -0.12
TGFB1-202ENST00000597453 XCR1P46094 333 aa14.31□□□□□ -0.12
TGFB1-202ENST00000597453 SRSF11Q05519 484 aaKnown RBP14.31□□□□□ -0.12
TGFB1-202ENST00000597453 SP140Q13342 867 aa14.31□□□□□ -0.12
TGFB1-202ENST00000597453 MFSD4BQ5TF39 518 aa14.31□□□□□ -0.12
TGFB1-202ENST00000597453 LCTLQ6UWM7 567 aa14.31□□□□□ -0.12
TGFB1-202ENST00000597453 ASPGQ86U10 573 aa14.31□□□□□ -0.12
TGFB1-202ENST00000597453 C17orf64Q86WR6 236 aa14.31□□□□□ -0.12
TGFB1-202ENST00000597453 MYO1HQ8N1T3 1032 aa14.31□□□□□ -0.12
TGFB1-202ENST00000597453 CAMKVQ8NCB2 501 aa14.31□□□□□ -0.12
TGFB1-202ENST00000597453 IFT81Q8WYA0 676 aa14.31□□□□□ -0.12
TGFB1-202ENST00000597453 THAP11Q96EK4 314 aa14.31□□□□□ -0.12
TGFB1-202ENST00000597453 VPS39Q96JC1 886 aa14.31□□□□□ -0.12
TGFB1-202ENST00000597453 CYTH2Q99418 400 aa14.31□□□□□ -0.12
TGFB1-202ENST00000597453 OLFM1Q99784 485 aa14.31□□□□□ -0.12
TGFB1-202ENST00000597453 CPNE1Q99829 537 aa14.31□□□□□ -0.12
TGFB1-202ENST00000597453 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.31□□□□□ -0.12
TGFB1-202ENST00000597453 PCBD2Q9H0N5 130 aa14.31□□□□□ -0.12
TGFB1-202ENST00000597453 TXNDC16Q9P2K2 825 aa14.31□□□□□ -0.12
TGFB1-202ENST00000597453 SLC16A5O15375 505 aa14.3□□□□□ -0.12
TGFB1-202ENST00000597453 RDH16O75452 317 aa14.3□□□□□ -0.12
TGFB1-202ENST00000597453 PIAS1O75925 651 aa14.3□□□□□ -0.12
TGFB1-202ENST00000597453 GP5P40197 560 aa14.3□□□□□ -0.12
TGFB1-202ENST00000597453 KCNK10P57789 538 aa14.3□□□□□ -0.12
TGFB1-202ENST00000597453 ZNF33BQ06732 778 aa14.3□□□□□ -0.12
TGFB1-202ENST00000597453 NAB1Q13506 487 aa14.3□□□□□ -0.12
TGFB1-202ENST00000597453 CPEB2Q7Z5Q1 589 aaKnown RBP14.3□□□□□ -0.12
TGFB1-202ENST00000597453 FBF1Q8TES7 1133 aa14.3□□□□□ -0.12
TGFB1-202ENST00000597453 SLC13A3Q8WWT9 602 aa14.3□□□□□ -0.12
TGFB1-202ENST00000597453 METTL21AQ8WXB1 218 aa14.3□□□□□ -0.12
TGFB1-202ENST00000597453 NR4A3Q92570 626 aa14.3□□□□□ -0.12
TGFB1-202ENST00000597453 PYCR2Q96C36 320 aa14.3□□□□□ -0.12
TGFB1-202ENST00000597453 RBCK1Q9BYM8 510 aa14.3□□□□□ -0.12
TGFB1-202ENST00000597453 RNF32Q9H0A6 362 aa14.3□□□□□ -0.12
TGFB1-202ENST00000597453 ANKHQ9HCJ1 492 aa14.3□□□□□ -0.12
TGFB1-202ENST00000597453 NAALAD2Q9Y3Q0 740 aa14.3□□□□□ -0.12
TGFB1-202ENST00000597453 LRBAP50851 2863 aa14.29□□□□□ -0.12
TGFB1-202ENST00000597453 OR5H15A6NDH6 313 aa14.29□□□□□ -0.12
TGFB1-202ENST00000597453 ZNF860A6NHJ4 632 aa14.29□□□□□ -0.12
TGFB1-202ENST00000597453 A8MUI8 341 aa14.29□□□□□ -0.12
TGFB1-202ENST00000597453 DYNC1I1O14576 645 aa14.29□□□□□ -0.12
TGFB1-202ENST00000597453 ZG16O60844 167 aa14.29□□□□□ -0.12
TGFB1-202ENST00000597453 STSP08842 583 aa14.29□□□□□ -0.12
TGFB1-202ENST00000597453 ICAM2P13598 275 aa14.29□□□□□ -0.12
TGFB1-202ENST00000597453 ZNF37AP17032 561 aaPredicted RBP14.29□□□□□ -0.12
TGFB1-202ENST00000597453 CCND1P24385 295 aa14.29□□□□□ -0.12
TGFB1-202ENST00000597453 IL2P60568 153 aa14.29□□□□□ -0.12
TGFB1-202ENST00000597453 MEF2AQ02078 507 aaPredicted RBP14.29□□□□□ -0.12
TGFB1-202ENST00000597453 INAQ16352 499 aa14.29□□□□□ -0.12
TGFB1-202ENST00000597453 KBTBD12Q3ZCT8 623 aa14.29□□□□□ -0.12
TGFB1-202ENST00000597453 ABHD17BQ5VST6 288 aa14.29□□□□□ -0.12
TGFB1-202ENST00000597453 C1QL3Q5VWW1 255 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms