RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 CRTC1Q6UUV9 634 aa12.76□□□□□ -0.37
VRK3-209ENST00000594948 HEATR4Q86WZ0 1026 aa12.76□□□□□ -0.37
VRK3-209ENST00000594948 SYTL1Q8IYJ3 562 aa12.76□□□□□ -0.37
VRK3-209ENST00000594948 SLC22A15Q8IZD6 547 aa12.76□□□□□ -0.37
VRK3-209ENST00000594948 UPF1Q92900 1129 aaKnown RBP eCLIP12.76□□□□□ -0.37
VRK3-209ENST00000594948 SH3KBP1Q96B97 665 aa12.76□□□□□ -0.37
VRK3-209ENST00000594948 ERLEC1Q96DZ1 483 aa12.76□□□□□ -0.37
VRK3-209ENST00000594948 SCRN2Q96FV2 425 aa12.76□□□□□ -0.37
VRK3-209ENST00000594948 MAPKAP1Q9BPZ7 522 aa12.76□□□□□ -0.37
VRK3-209ENST00000594948 OR2B2Q9GZK3 357 aa12.76□□□□□ -0.37
VRK3-209ENST00000594948 NUAK2Q9H093 628 aa12.76□□□□□ -0.37
VRK3-209ENST00000594948 OR51E2Q9H255 320 aa12.76□□□□□ -0.37
VRK3-209ENST00000594948 NEK6Q9HC98 313 aa12.76□□□□□ -0.37
VRK3-209ENST00000594948 RAD18Q9NS91 495 aa12.76□□□□□ -0.37
VRK3-209ENST00000594948 EHD3Q9NZN3 535 aa12.76□□□□□ -0.37
VRK3-209ENST00000594948 AFF4Q9UHB7 1163 aaKnown RBP12.76□□□□□ -0.37
VRK3-209ENST00000594948 PCDHB7Q9Y5E2 793 aa12.76□□□□□ -0.37
VRK3-209ENST00000594948 PLXNA2O75051 1894 aa12.76□□□□□ -0.37
VRK3-209ENST00000594948 COL4A6Q14031 1691 aa12.75□□□□□ -0.37
VRK3-209ENST00000594948 NPIPB15A6NHN6 443 aaPredicted RBP12.75□□□□□ -0.37
VRK3-209ENST00000594948 ZW10O43264 779 aa12.75□□□□□ -0.37
VRK3-209ENST00000594948 PTHP01270 115 aa12.75□□□□□ -0.37
VRK3-209ENST00000594948 SRPRAP08240 638 aaKnown RBP12.75□□□□□ -0.37
VRK3-209ENST00000594948 CD72P21854 359 aa12.75□□□□□ -0.37
VRK3-209ENST00000594948 CTGFP29279 349 aa12.75□□□□□ -0.37
VRK3-209ENST00000594948 HMGA2P52926 109 aa12.75□□□□□ -0.37
VRK3-209ENST00000594948 PNLIPRP1P54315 467 aa12.75□□□□□ -0.37
VRK3-209ENST00000594948 ST3GAL4Q11206 333 aa12.75□□□□□ -0.37
VRK3-209ENST00000594948 SF3B4Q15427 424 aaKnown RBP eCLIP12.75□□□□□ -0.37
VRK3-209ENST00000594948 PRSS55Q6UWB4 352 aaPredicted RBP12.75□□□□□ -0.37
VRK3-209ENST00000594948 GDPGP1Q6ZNW5 385 aa12.75□□□□□ -0.37
VRK3-209ENST00000594948 Q6ZPB1 254 aaPredicted RBP12.75□□□□□ -0.37
VRK3-209ENST00000594948 LGI4Q8N135 537 aa12.75□□□□□ -0.37
VRK3-209ENST00000594948 ST13P5Q8NFI4 369 aaPredicted RBP12.75□□□□□ -0.37
VRK3-209ENST00000594948 SPPL2AQ8TCT8 520 aa12.75□□□□□ -0.37
VRK3-209ENST00000594948 TMCO6Q96DC7 493 aa12.75□□□□□ -0.37
VRK3-209ENST00000594948 ECHDC3Q96DC8 303 aa12.75□□□□□ -0.37
VRK3-209ENST00000594948 P2RY13Q9BPV8 354 aa12.75□□□□□ -0.37
VRK3-209ENST00000594948 MRPL9Q9BYD2 267 aaKnown RBP12.75□□□□□ -0.37
VRK3-209ENST00000594948 BHLHE41Q9C0J9 482 aaPredicted RBP12.75□□□□□ -0.37
VRK3-209ENST00000594948 ZNF556Q9HAH1 456 aa12.75□□□□□ -0.37
VRK3-209ENST00000594948 GPR83Q9NYM4 423 aa12.75□□□□□ -0.37
VRK3-209ENST00000594948 ATP6V1HQ9UI12 483 aa12.75□□□□□ -0.37
VRK3-209ENST00000594948 DUSP12Q9UNI6 340 aa12.75□□□□□ -0.37
VRK3-209ENST00000594948 DENND4CQ5VZ89 1909 aa12.75□□□□□ -0.37
VRK3-209ENST00000594948 LOC100506127A0A0U1RQW1 187 aa12.74□□□□□ -0.37
VRK3-209ENST00000594948 FAM172BPA6NC97 362 aa12.74□□□□□ -0.37
VRK3-209ENST00000594948 GABRR3A8MPY1 467 aa12.74□□□□□ -0.37
VRK3-209ENST00000594948 CCRL2O00421 344 aa12.74□□□□□ -0.37
VRK3-209ENST00000594948 HOXA2O43364 376 aa12.74□□□□□ -0.37
VRK3-209ENST00000594948 SMAD6O43541 496 aaKnown RBP12.74□□□□□ -0.37
VRK3-209ENST00000594948 TNFRSF21O75509 655 aa12.74□□□□□ -0.37
VRK3-209ENST00000594948 GALTP07902 379 aa12.74□□□□□ -0.37
VRK3-209ENST00000594948 NUDT7P0C024 238 aa12.74□□□□□ -0.37
VRK3-209ENST00000594948 IDSP22304 550 aa12.74□□□□□ -0.37
VRK3-209ENST00000594948 BMPR1AP36894 532 aa12.74□□□□□ -0.37
VRK3-209ENST00000594948 LIMS1P48059 325 aa12.74□□□□□ -0.37
VRK3-209ENST00000594948 RAE1P78406 368 aaKnown RBP12.74□□□□□ -0.37
VRK3-209ENST00000594948 ATP13A5Q4VNC0 1218 aa12.74□□□□□ -0.37
VRK3-209ENST00000594948 SPIN4Q56A73 249 aa12.74□□□□□ -0.37
VRK3-209ENST00000594948 Q6ZNB5 142 aa12.74□□□□□ -0.37
VRK3-209ENST00000594948 USP45Q70EL2 814 aa12.74□□□□□ -0.37
VRK3-209ENST00000594948 TSPAN33Q86UF1 283 aa12.74□□□□□ -0.37
VRK3-209ENST00000594948 RNF130Q86XS8 419 aa12.74□□□□□ -0.37
VRK3-209ENST00000594948 KRT73Q86Y46 540 aa12.74□□□□□ -0.37
VRK3-209ENST00000594948 OR6K2Q8NGY2 324 aa12.74□□□□□ -0.37
VRK3-209ENST00000594948 SNX18Q96RF0 628 aa12.74□□□□□ -0.37
VRK3-209ENST00000594948 MCCC1Q96RQ3 725 aaPredicted RBP12.74□□□□□ -0.37
VRK3-209ENST00000594948 CHCHD6Q9BRQ6 235 aa12.74□□□□□ -0.37
VRK3-209ENST00000594948 CENPOQ9BU64 300 aa12.74□□□□□ -0.37
VRK3-209ENST00000594948 TMEM38AQ9H6F2 299 aa12.74□□□□□ -0.37
VRK3-209ENST00000594948 NMRK2Q9NPI5 230 aa12.74□□□□□ -0.37
VRK3-209ENST00000594948 CCDC177Q9NQR7 707 aaPredicted RBP12.74□□□□□ -0.37
VRK3-209ENST00000594948 ABCB8Q9NUT2 735 aa12.74□□□□□ -0.37
VRK3-209ENST00000594948 TMEM184CQ9NVA4 438 aa12.74□□□□□ -0.37
VRK3-209ENST00000594948 IMPAD1Q9NX62 359 aa12.74□□□□□ -0.37
VRK3-209ENST00000594948 FBXL12Q9NXK8 326 aa12.74□□□□□ -0.37
VRK3-209ENST00000594948 QPCTLQ9NXS2 382 aa12.74□□□□□ -0.37
VRK3-209ENST00000594948 SPATA7Q9P0W8 599 aa12.74□□□□□ -0.37
VRK3-209ENST00000594948 BTBD3Q9Y2F9 522 aa12.74□□□□□ -0.37
VRK3-209ENST00000594948 PDZK1P1A8MUH7 402 aa12.74□□□□□ -0.37
VRK3-209ENST00000594948 PSMD11O00231 422 aa12.74□□□□□ -0.37
VRK3-209ENST00000594948 CAPN5O15484 640 aaPredicted RBP12.74□□□□□ -0.37
VRK3-209ENST00000594948 ADAM12O43184 909 aa12.74□□□□□ -0.37
VRK3-209ENST00000594948 KIAA0513O60268 411 aa12.74□□□□□ -0.37
VRK3-209ENST00000594948 UGT2B17O75795 530 aa12.74□□□□□ -0.37
VRK3-209ENST00000594948 CCNKO75909 580 aa12.74□□□□□ -0.37
VRK3-209ENST00000594948 EFEMP2O95967 443 aa12.74□□□□□ -0.37
VRK3-209ENST00000594948 IFNA14P01570 189 aa12.74□□□□□ -0.37
VRK3-209ENST00000594948 KRT8P05787 483 aa12.74□□□□□ -0.37
VRK3-209ENST00000594948 GSTM1P09488 218 aa12.74□□□□□ -0.37
VRK3-209ENST00000594948 TRAPPC2P0DI81 140 aa12.74□□□□□ -0.37
VRK3-209ENST00000594948 TRAPPC2BP0DI82 140 aa12.74□□□□□ -0.37
VRK3-209ENST00000594948 HLA-EP13747 358 aa12.74□□□□□ -0.37
VRK3-209ENST00000594948 ATP1B2P14415 290 aaPredicted RBP12.74□□□□□ -0.37
VRK3-209ENST00000594948 CD22P20273 847 aa12.74□□□□□ -0.37
VRK3-209ENST00000594948 ITPKAP23677 461 aa12.74□□□□□ -0.37
VRK3-209ENST00000594948 CHMP24386 653 aa12.74□□□□□ -0.37
VRK3-209ENST00000594948 IDH2P48735 452 aaKnown RBP12.74□□□□□ -0.37
VRK3-209ENST00000594948 CDC42P60953 191 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms