RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 KLHL31Q9H511 634 aa10.8□□□□□ -0.68
VMP1-207ENST00000588131 ASIC5Q9NY37 505 aa10.8□□□□□ -0.68
VMP1-207ENST00000588131 NOP53Q9NZM5 478 aaKnown RBP10.8□□□□□ -0.68
VMP1-207ENST00000588131 NCDNQ9UBB6 729 aa10.8□□□□□ -0.68
VMP1-207ENST00000588131 ATXN7L1Q9ULK2 861 aaPredicted RBP10.8□□□□□ -0.68
VMP1-207ENST00000588131 CAPN7Q9Y6W3 813 aa10.8□□□□□ -0.68
VMP1-207ENST00000588131 LRIT2A6NDA9 550 aa10.79□□□□□ -0.68
VMP1-207ENST00000588131 C4orf51C9J302 202 aa10.79□□□□□ -0.68
VMP1-207ENST00000588131 RTCAO00442 366 aaKnown RBP10.79□□□□□ -0.68
VMP1-207ENST00000588131 PLPP1O14494 284 aa10.79□□□□□ -0.68
VMP1-207ENST00000588131 ANKRD28O15084 1053 aa10.79□□□□□ -0.68
VMP1-207ENST00000588131 KLHL18O94889 574 aa10.79□□□□□ -0.68
VMP1-207ENST00000588131 CBX6O95503 412 aa10.79□□□□□ -0.68
VMP1-207ENST00000588131 LDOC1O95751 146 aaPredicted RBP10.79□□□□□ -0.68
VMP1-207ENST00000588131 LMNAP02545 664 aaKnown RBP10.79□□□□□ -0.68
VMP1-207ENST00000588131 RPLP0P05388 317 aaKnown RBP10.79□□□□□ -0.68
VMP1-207ENST00000588131 CTSBP07858 339 aa10.79□□□□□ -0.68
VMP1-207ENST00000588131 T-ENOLP0DO92 83 aa10.79□□□□□ -0.68
VMP1-207ENST00000588131 IDO1P14902 403 aa10.79□□□□□ -0.68
VMP1-207ENST00000588131 SDC1P18827 310 aa10.79□□□□□ -0.68
VMP1-207ENST00000588131 TGM1P22735 817 aa10.79□□□□□ -0.68
VMP1-207ENST00000588131 TACR1P25103 407 aa10.79□□□□□ -0.68
VMP1-207ENST00000588131 PTX3P26022 381 aaPredicted RBP10.79□□□□□ -0.68
VMP1-207ENST00000588131 MRPL19P49406 292 aaKnown RBP10.79□□□□□ -0.68
VMP1-207ENST00000588131 STX1BP61266 288 aa10.79□□□□□ -0.68
VMP1-207ENST00000588131 UFM1P61960 85 aa10.79□□□□□ -0.68
VMP1-207ENST00000588131 SNRPNP63162 240 aaKnown RBP10.79□□□□□ -0.68
VMP1-207ENST00000588131 RELAQ04206 551 aa10.79□□□□□ -0.68
VMP1-207ENST00000588131 ACSM2AQ08AH3 577 aa10.79□□□□□ -0.68
VMP1-207ENST00000588131 MAD2L1Q13257 205 aaPredicted RBP10.79□□□□□ -0.68
VMP1-207ENST00000588131 CUL3Q13618 768 aa10.79□□□□□ -0.68
VMP1-207ENST00000588131 KRT72Q14CN4 511 aa10.79□□□□□ -0.68
VMP1-207ENST00000588131 CSRP2Q16527 193 aa10.79□□□□□ -0.68
VMP1-207ENST00000588131 GSTA3Q16772 222 aa10.79□□□□□ -0.68
VMP1-207ENST00000588131 INAVAQ3KP66 663 aa10.79□□□□□ -0.68
VMP1-207ENST00000588131 PDCD4Q53EL6 469 aaKnown RBP10.79□□□□□ -0.68
VMP1-207ENST00000588131 TOR1AIP1Q5JTV8 583 aa10.79□□□□□ -0.68
VMP1-207ENST00000588131 SNAP47Q5SQN1 464 aa10.79□□□□□ -0.68
VMP1-207ENST00000588131 DEPDC1Q5TB30 811 aa10.79□□□□□ -0.68
VMP1-207ENST00000588131 ACSM2BQ68CK6 577 aa10.79□□□□□ -0.68
VMP1-207ENST00000588131 NOXRED1Q6NXP6 359 aa10.79□□□□□ -0.68
VMP1-207ENST00000588131 CYP20A1Q6UW02 462 aa10.79□□□□□ -0.68
VMP1-207ENST00000588131 GK5Q6ZS86 529 aa10.79□□□□□ -0.68
VMP1-207ENST00000588131 ZNF771Q7L3S4 317 aaPredicted RBP10.79□□□□□ -0.68
VMP1-207ENST00000588131 COMMD6Q7Z4G1 85 aa10.79□□□□□ -0.68
VMP1-207ENST00000588131 UBE3DQ7Z6J8 389 aa10.79□□□□□ -0.68
VMP1-207ENST00000588131 ASPGQ86U10 573 aa10.79□□□□□ -0.68
VMP1-207ENST00000588131 MIER2Q8N344 545 aa10.79□□□□□ -0.68
VMP1-207ENST00000588131 NT5CQ8TCD5 201 aa10.79□□□□□ -0.68
VMP1-207ENST00000588131 RHBDD1Q8TEB9 315 aa10.79□□□□□ -0.68
VMP1-207ENST00000588131 SLC13A3Q8WWT9 602 aa10.79□□□□□ -0.68
VMP1-207ENST00000588131 TM4SF19Q96DZ7 209 aa10.79□□□□□ -0.68
VMP1-207ENST00000588131 THAP11Q96EK4 314 aa10.79□□□□□ -0.68
VMP1-207ENST00000588131 TEX37Q96LM6 180 aa10.79□□□□□ -0.68
VMP1-207ENST00000588131 ZNF717Q9BY31 904 aaPredicted RBP10.79□□□□□ -0.68
VMP1-207ENST00000588131 BRINP2Q9C0B6 783 aa10.79□□□□□ -0.68
VMP1-207ENST00000588131 LRRN3Q9H3W5 708 aa10.79□□□□□ -0.68
VMP1-207ENST00000588131 ACTL8Q9H568 366 aa10.79□□□□□ -0.68
VMP1-207ENST00000588131 TMEM9BQ9NQ34 198 aa10.79□□□□□ -0.68
VMP1-207ENST00000588131 LHX9Q9NQ69 397 aa10.79□□□□□ -0.68
VMP1-207ENST00000588131 SDR39U1Q9NRG7 319 aaPredicted RBP10.79□□□□□ -0.68
VMP1-207ENST00000588131 NMRK1Q9NWW6 199 aa10.79□□□□□ -0.68
VMP1-207ENST00000588131 BAIAP2L1Q9UHR4 511 aa10.79□□□□□ -0.68
VMP1-207ENST00000588131 EIF3LQ9Y262 564 aaKnown RBP10.79□□□□□ -0.68
VMP1-207ENST00000588131 ADAMTS20P59510 1910 aa10.79□□□□□ -0.68
VMP1-207ENST00000588131 DMDP11532 3685 aa10.78□□□□□ -0.68
VMP1-207ENST00000588131 A0A0G2JN53 185 aa10.78□□□□□ -0.68
VMP1-207ENST00000588131 A8MU76 341 aa10.78□□□□□ -0.68
VMP1-207ENST00000588131 C9JVG2 144 aa10.78□□□□□ -0.68
VMP1-207ENST00000588131 H0YGG7 62 aa10.78□□□□□ -0.68
VMP1-207ENST00000588131 PSMD12O00232 456 aaPredicted RBP10.78□□□□□ -0.68
VMP1-207ENST00000588131 SLC22A2O15244 555 aa10.78□□□□□ -0.68
VMP1-207ENST00000588131 RASSF9O75901 435 aa10.78□□□□□ -0.68
VMP1-207ENST00000588131 SEMA3DO95025 777 aa10.78□□□□□ -0.68
VMP1-207ENST00000588131 GBAP04062 536 aa10.78□□□□□ -0.68
VMP1-207ENST00000588131 BCKDHAP12694 445 aa10.78□□□□□ -0.68
VMP1-207ENST00000588131 ACPPP15309 386 aa10.78□□□□□ -0.68
VMP1-207ENST00000588131 CKMT2P17540 419 aa10.78□□□□□ -0.68
VMP1-207ENST00000588131 IL12AP29459 219 aa10.78□□□□□ -0.68
VMP1-207ENST00000588131 TIA1P31483 386 aaKnown RBP eCLIP10.78□□□□□ -0.68
VMP1-207ENST00000588131 BSGP35613 385 aa10.78□□□□□ -0.68
VMP1-207ENST00000588131 ZFP36L2P47974 494 aaKnown RBP10.78□□□□□ -0.68
VMP1-207ENST00000588131 GABRA4P48169 554 aa10.78□□□□□ -0.68
VMP1-207ENST00000588131 DUSP3P51452 185 aaPredicted RBP10.78□□□□□ -0.68
VMP1-207ENST00000588131 ARF3P61204 181 aaPredicted RBP10.78□□□□□ -0.68
VMP1-207ENST00000588131 SQSTM1Q13501 440 aa10.78□□□□□ -0.68
VMP1-207ENST00000588131 COL9A2Q14055 689 aaPredicted RBP10.78□□□□□ -0.68
VMP1-207ENST00000588131 PTGR1Q14914 329 aa10.78□□□□□ -0.68
VMP1-207ENST00000588131 RPS6KA2Q15349 733 aa10.78□□□□□ -0.68
VMP1-207ENST00000588131 HKDC1Q2TB90 917 aa10.78□□□□□ -0.68
VMP1-207ENST00000588131 ADPRMQ3LIE5 342 aa10.78□□□□□ -0.68
VMP1-207ENST00000588131 AGKQ53H12 422 aa10.78□□□□□ -0.68
VMP1-207ENST00000588131 SPIN4Q56A73 249 aa10.78□□□□□ -0.68
VMP1-207ENST00000588131 CACHD1Q5VU97 1274 aa10.78□□□□□ -0.68
VMP1-207ENST00000588131 WDR74Q6RFH5 385 aaPredicted RBP10.78□□□□□ -0.68
VMP1-207ENST00000588131 ZNF574Q6ZN55 896 aaPredicted RBP10.78□□□□□ -0.68
VMP1-207ENST00000588131 CCDC121Q6ZUS5 278 aa10.78□□□□□ -0.68
VMP1-207ENST00000588131 PLXDC1Q8IUK5 500 aa10.78□□□□□ -0.68
VMP1-207ENST00000588131 FUNDC1Q8IVP5 155 aa10.78□□□□□ -0.68
VMP1-207ENST00000588131 DNAJC22Q8N4W6 341 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms