RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 FAM120CQ9NX05 1096 aaKnown RBP19■□□□□ 0.63
TRIM47-204ENST00000587339 SLC25A37Q9NYZ2 338 aa19■□□□□ 0.63
TRIM47-204ENST00000587339 EGFL7Q9UHF1 273 aa19■□□□□ 0.63
TRIM47-204ENST00000587339 SNX7Q9UNH6 387 aa19■□□□□ 0.63
TRIM47-204ENST00000587339 PCDHB14Q9Y5E9 798 aa19■□□□□ 0.63
TRIM47-204ENST00000587339 A0A096LPI6 279 aa18.99■□□□□ 0.63
TRIM47-204ENST00000587339 TLR4O00206 839 aa18.99■□□□□ 0.63
TRIM47-204ENST00000587339 HAT1O14929 419 aa18.99■□□□□ 0.63
TRIM47-204ENST00000587339 CLEC3AO75596 197 aa18.99■□□□□ 0.63
TRIM47-204ENST00000587339 B3GALT4O96024 378 aa18.99■□□□□ 0.63
TRIM47-204ENST00000587339 CSF2P04141 144 aa18.99■□□□□ 0.63
TRIM47-204ENST00000587339 SERPIND1P05546 499 aa18.99■□□□□ 0.63
TRIM47-204ENST00000587339 CPTPQ5TA50 214 aa18.99■□□□□ 0.63
TRIM47-204ENST00000587339 CAMKMTQ7Z624 323 aa18.99■□□□□ 0.63
TRIM47-204ENST00000587339 FAM46DQ8NEK8 389 aa18.99■□□□□ 0.63
TRIM47-204ENST00000587339 NELL1Q92832 810 aa18.99■□□□□ 0.63
TRIM47-204ENST00000587339 INPP5KQ9BT40 448 aa18.99■□□□□ 0.63
TRIM47-204ENST00000587339 IER2Q9BTL4 223 aa18.99■□□□□ 0.63
TRIM47-204ENST00000587339 THUMPD3Q9BV44 507 aaKnown RBP18.99■□□□□ 0.63
TRIM47-204ENST00000587339 DUSP26Q9BV47 211 aa18.99■□□□□ 0.63
TRIM47-204ENST00000587339 SORBS1Q9BX66 1292 aaKnown RBP18.99■□□□□ 0.63
TRIM47-204ENST00000587339 TM9SF3Q9HD45 589 aa18.99■□□□□ 0.63
TRIM47-204ENST00000587339 VCANP13611 3396 aa18.99■□□□□ 0.63
TRIM47-204ENST00000587339 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.98■□□□□ 0.63
TRIM47-204ENST00000587339 H3BNX3 289 aa18.98■□□□□ 0.63
TRIM47-204ENST00000587339 LAMP1P11279 417 aa18.98■□□□□ 0.63
TRIM47-204ENST00000587339 PIM1P11309 404 aaPredicted RBP18.98■□□□□ 0.63
TRIM47-204ENST00000587339 GSTM2P28161 218 aa18.98■□□□□ 0.63
TRIM47-204ENST00000587339 BCL6P41182 706 aa18.98■□□□□ 0.63
TRIM47-204ENST00000587339 UBE2IP63279 158 aaKnown RBP18.98■□□□□ 0.63
TRIM47-204ENST00000587339 SELPLGQ14242 412 aa18.98■□□□□ 0.63
TRIM47-204ENST00000587339 ZNF425Q6IV72 752 aa18.98■□□□□ 0.63
TRIM47-204ENST00000587339 LRRC74BQ6ZQY2 392 aa18.98■□□□□ 0.63
TRIM47-204ENST00000587339 PAGE2Q7Z2X7 111 aa18.98■□□□□ 0.63
TRIM47-204ENST00000587339 SFTPA2Q8IWL1 248 aa18.98■□□□□ 0.63
TRIM47-204ENST00000587339 MSRB3Q8IXL7 192 aa18.98■□□□□ 0.63
TRIM47-204ENST00000587339 TMEFF1Q8IYR6 380 aa18.98■□□□□ 0.63
TRIM47-204ENST00000587339 OR10G6Q8NH81 332 aa18.98■□□□□ 0.63
TRIM47-204ENST00000587339 C16orf78Q8WTQ4 265 aa18.98■□□□□ 0.63
TRIM47-204ENST00000587339 GBP5Q96PP8 586 aa18.98■□□□□ 0.63
TRIM47-204ENST00000587339 PANX1Q96RD7 426 aa18.98■□□□□ 0.63
TRIM47-204ENST00000587339 ECSITQ9BQ95 431 aa18.98■□□□□ 0.63
TRIM47-204ENST00000587339 TACO1Q9BSH4 297 aaKnown RBP18.98■□□□□ 0.63
TRIM47-204ENST00000587339 REEP4Q9H6H4 257 aa18.98■□□□□ 0.63
TRIM47-204ENST00000587339 MYNNQ9NPC7 610 aa18.98■□□□□ 0.63
TRIM47-204ENST00000587339 SLC6A13Q9NSD5 602 aa18.98■□□□□ 0.63
TRIM47-204ENST00000587339 SH3BP4Q9P0V3 963 aa18.98■□□□□ 0.63
TRIM47-204ENST00000587339 ACTR3BQ9P1U1 418 aa18.98■□□□□ 0.63
TRIM47-204ENST00000587339 BTBD3Q9Y2F9 522 aa18.98■□□□□ 0.63
TRIM47-204ENST00000587339 TRBV5-3A0A0A0MS03 114 aa18.98■□□□□ 0.63
TRIM47-204ENST00000587339 OR6C74A6NCV1 312 aa18.98■□□□□ 0.63
TRIM47-204ENST00000587339 NME1P15531 152 aaKnown RBP18.98■□□□□ 0.63
TRIM47-204ENST00000587339 BCKDHBP21953 392 aa18.98■□□□□ 0.63
TRIM47-204ENST00000587339 GCKP35557 465 aa18.98■□□□□ 0.63
TRIM47-204ENST00000587339 WNT3P56703 355 aa18.98■□□□□ 0.63
TRIM47-204ENST00000587339 TAS2R50P59544 299 aa18.98■□□□□ 0.63
TRIM47-204ENST00000587339 RHDQ02161 417 aa18.98■□□□□ 0.63
TRIM47-204ENST00000587339 ELOCQ15369 112 aa18.98■□□□□ 0.63
TRIM47-204ENST00000587339 GTDC1Q4AE62 458 aa18.98■□□□□ 0.63
TRIM47-204ENST00000587339 RUNDC3AQ59EK9 446 aa18.98■□□□□ 0.63
TRIM47-204ENST00000587339 CCNYL2Q5T2Q4 361 aa18.98■□□□□ 0.63
TRIM47-204ENST00000587339 PTRH1Q86Y79 214 aaKnown RBP18.98■□□□□ 0.63
TRIM47-204ENST00000587339 VPS37AQ8NEZ2 397 aa18.98■□□□□ 0.63
TRIM47-204ENST00000587339 CREB3L4Q8TEY5 395 aa18.98■□□□□ 0.63
TRIM47-204ENST00000587339 ZUFSPQ96AP4 578 aa18.98■□□□□ 0.63
TRIM47-204ENST00000587339 SARGQ9BW04 601 aa18.98■□□□□ 0.63
TRIM47-204ENST00000587339 TRIM15Q9C019 465 aa18.98■□□□□ 0.63
TRIM47-204ENST00000587339 MUC13Q9H3R2 512 aa18.98■□□□□ 0.63
TRIM47-204ENST00000587339 PIF1Q9H611 641 aa18.98■□□□□ 0.63
TRIM47-204ENST00000587339 KLHL20Q9Y2M5 609 aa18.98■□□□□ 0.63
TRIM47-204ENST00000587339 ARHGAP10A1A4S6 786 aa18.97■□□□□ 0.63
TRIM47-204ENST00000587339 GSAPA4D1B5 854 aa18.97■□□□□ 0.63
TRIM47-204ENST00000587339 RTCAO00442 366 aaKnown RBP18.97■□□□□ 0.63
TRIM47-204ENST00000587339 NDUFS4O43181 175 aa18.97■□□□□ 0.63
TRIM47-204ENST00000587339 SCN2BO60939 215 aa18.97■□□□□ 0.63
TRIM47-204ENST00000587339 GSNP06396 782 aa18.97■□□□□ 0.63
TRIM47-204ENST00000587339 C8BP07358 591 aa18.97■□□□□ 0.63
TRIM47-204ENST00000587339 POLR2CP19387 275 aaPredicted RBP18.97■□□□□ 0.63
TRIM47-204ENST00000587339 TPP2P29144 1249 aaPredicted RBP18.97■□□□□ 0.63
TRIM47-204ENST00000587339 AHRP35869 848 aa18.97■□□□□ 0.63
TRIM47-204ENST00000587339 RPL3P39023 403 aaKnown RBP18.97■□□□□ 0.63
TRIM47-204ENST00000587339 CDKN2CP42773 168 aa18.97■□□□□ 0.63
TRIM47-204ENST00000587339 TRPC1P48995 793 aa18.97■□□□□ 0.63
TRIM47-204ENST00000587339 CYP4F3Q08477 520 aa18.97■□□□□ 0.63
TRIM47-204ENST00000587339 DUOXA1Q1HG43 343 aa18.97■□□□□ 0.63
TRIM47-204ENST00000587339 ZDHHC1Q8WTX9 485 aa18.97■□□□□ 0.63
TRIM47-204ENST00000587339 NRG4Q8WWG1 115 aa18.97■□□□□ 0.63
TRIM47-204ENST00000587339 RGMAQ96B86 450 aa18.97■□□□□ 0.63
TRIM47-204ENST00000587339 MIEF2Q96C03 454 aa18.97■□□□□ 0.63
TRIM47-204ENST00000587339 COQ8BQ96D53 544 aa18.97■□□□□ 0.63
TRIM47-204ENST00000587339 QRFPRQ96P65 431 aa18.97■□□□□ 0.63
TRIM47-204ENST00000587339 ZNF717Q9BY31 904 aaPredicted RBP18.97■□□□□ 0.63
TRIM47-204ENST00000587339 EXO1Q9UQ84 846 aaKnown RBP18.97■□□□□ 0.63
TRIM47-204ENST00000587339 PCDHGA2Q9Y5H1 932 aa18.97■□□□□ 0.63
TRIM47-204ENST00000587339 AP1M2Q9Y6Q5 423 aa18.97■□□□□ 0.63
TRIM47-204ENST00000587339 PLXND1Q9Y4D7 1925 aa18.97■□□□□ 0.63
TRIM47-204ENST00000587339 ARHGEF17Q96PE2 2063 aaPredicted RBP18.97■□□□□ 0.63
TRIM47-204ENST00000587339 HEATR5BQ9P2D3 2071 aa18.97■□□□□ 0.63
TRIM47-204ENST00000587339 PRSS51A0A1B0GVH4 220 aa18.96■□□□□ 0.63
TRIM47-204ENST00000587339 FAM221BA6H8Z2 402 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms