RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 PHF12Q96QT6 1004 aa21.75■■□□□ 1.07
CCDC47-204ENST00000582252 NT5DC2Q9H857 520 aa21.75■■□□□ 1.07
CCDC47-204ENST00000582252 MYNNQ9NPC7 610 aa21.75■■□□□ 1.07
CCDC47-204ENST00000582252 DCAF13Q9NV06 445 aaKnown RBP21.75■■□□□ 1.07
CCDC47-204ENST00000582252 ZNF282Q9UDV7 671 aaPredicted RBP21.75■■□□□ 1.07
CCDC47-204ENST00000582252 PCDHB11Q9Y5F2 797 aa21.75■■□□□ 1.07
CCDC47-204ENST00000582252 CFAP20Q9Y6A4 193 aaKnown RBP21.75■■□□□ 1.07
CCDC47-204ENST00000582252 AK5Q9Y6K8 562 aa21.75■■□□□ 1.07
CCDC47-204ENST00000582252 GABRR3A8MPY1 467 aa21.74■■□□□ 1.07
CCDC47-204ENST00000582252 RNASET2O00584 256 aaKnown RBP21.74■■□□□ 1.07
CCDC47-204ENST00000582252 CCNDBP1O95273 360 aa21.74■■□□□ 1.07
CCDC47-204ENST00000582252 HOXC4P09017 264 aaPredicted RBP21.74■■□□□ 1.07
CCDC47-204ENST00000582252 ACADMP11310 421 aa21.74■■□□□ 1.07
CCDC47-204ENST00000582252 ENGP17813 658 aa21.74■■□□□ 1.07
CCDC47-204ENST00000582252 RPL10P27635 214 aaKnown RBP21.74■■□□□ 1.07
CCDC47-204ENST00000582252 MEF2AQ02078 507 aaPredicted RBP21.74■■□□□ 1.07
CCDC47-204ENST00000582252 RBBP5Q15291 538 aaKnown RBP21.74■■□□□ 1.07
CCDC47-204ENST00000582252 SF1Q15637 639 aaKnown RBP21.74■■□□□ 1.07
CCDC47-204ENST00000582252 MRGPRX1Q96LB2 322 aa21.74■■□□□ 1.07
CCDC47-204ENST00000582252 ANKRD60Q9BZ19 345 aa21.74■■□□□ 1.07
CCDC47-204ENST00000582252 RHBGQ9H310 441 aa21.74■■□□□ 1.07
CCDC47-204ENST00000582252 ZNF696Q9H7X3 374 aa21.74■■□□□ 1.07
CCDC47-204ENST00000582252 UBAP1Q9NZ09 502 aa21.74■■□□□ 1.07
CCDC47-204ENST00000582252 SH3BP4Q9P0V3 963 aa21.74■■□□□ 1.07
CCDC47-204ENST00000582252 VPS4AQ9UN37 437 aa21.74■■□□□ 1.07
CCDC47-204ENST00000582252 SEMA3DO95025 777 aa21.73■■□□□ 1.07
CCDC47-204ENST00000582252 CEACAM5P06731 702 aa21.73■■□□□ 1.07
CCDC47-204ENST00000582252 ZNF23P17027 643 aa21.73■■□□□ 1.07
CCDC47-204ENST00000582252 GPX2P18283 190 aa21.73■■□□□ 1.07
CCDC47-204ENST00000582252 DGKEP52429 567 aa21.73■■□□□ 1.07
CCDC47-204ENST00000582252 KRT33BQ14525 404 aa21.73■■□□□ 1.07
CCDC47-204ENST00000582252 NHSL2Q5HYW2 709 aa21.73■■□□□ 1.07
CCDC47-204ENST00000582252 KRT80Q6KB66 452 aa21.73■■□□□ 1.07
CCDC47-204ENST00000582252 IKBIPQ70UQ0 350 aa21.73■■□□□ 1.07
CCDC47-204ENST00000582252 SYT13Q7L8C5 426 aa21.73■■□□□ 1.07
CCDC47-204ENST00000582252 CARM1Q86X55 608 aa21.73■■□□□ 1.07
CCDC47-204ENST00000582252 LMNTD1Q8N9Z9 388 aa21.73■■□□□ 1.07
CCDC47-204ENST00000582252 DENND6BQ8NEG7 585 aa21.73■■□□□ 1.07
CCDC47-204ENST00000582252 ABHD11Q8NFV4 315 aa21.73■■□□□ 1.07
CCDC47-204ENST00000582252 SDCCAG3Q96C92 435 aa21.73■■□□□ 1.07
CCDC47-204ENST00000582252 BTBD1Q9H0C5 482 aa21.73■■□□□ 1.07
CCDC47-204ENST00000582252 OR51B5Q9H339 312 aa21.73■■□□□ 1.07
CCDC47-204ENST00000582252 MVB12BQ9H7P6 319 aa21.73■■□□□ 1.07
CCDC47-204ENST00000582252 POLMQ9NP87 494 aaPredicted RBP21.73■■□□□ 1.07
CCDC47-204ENST00000582252 ZNF639Q9UID6 485 aa21.73■■□□□ 1.07
CCDC47-204ENST00000582252 MOSPD1Q9UJG1 213 aa21.73■■□□□ 1.07
CCDC47-204ENST00000582252 SAMD4AQ9UPU9 718 aaKnown RBP21.73■■□□□ 1.07
CCDC47-204ENST00000582252 GMEB1Q9Y692 573 aa21.73■■□□□ 1.07
CCDC47-204ENST00000582252 TCRBV21S2A2A0A5A6 115 aa21.72■■□□□ 1.07
CCDC47-204ENST00000582252 FAM170BA6NMN3 283 aa21.72■■□□□ 1.07
CCDC47-204ENST00000582252 DDX5P17844 614 aaKnown RBP21.72■■□□□ 1.07
CCDC47-204ENST00000582252 PYCR3Q53H96 274 aa21.72■■□□□ 1.07
CCDC47-204ENST00000582252 CPZQ66K79 652 aa21.72■■□□□ 1.07
CCDC47-204ENST00000582252 ARMCX6Q7L4S7 300 aa21.72■■□□□ 1.07
CCDC47-204ENST00000582252 GJD3Q8N144 294 aa21.72■■□□□ 1.07
CCDC47-204ENST00000582252 C2orf73Q8N5S3 287 aaPredicted RBP21.72■■□□□ 1.07
CCDC47-204ENST00000582252 TRAPPC9Q96Q05 1148 aa21.72■■□□□ 1.07
CCDC47-204ENST00000582252 INSM2Q96T92 566 aaPredicted RBP21.72■■□□□ 1.07
CCDC47-204ENST00000582252 MENTQ9BUN1 341 aa21.72■■□□□ 1.07
CCDC47-204ENST00000582252 ACAT2Q9BWD1 397 aa21.72■■□□□ 1.07
CCDC47-204ENST00000582252 SLC6A17Q9H1V8 727 aa21.72■■□□□ 1.07
CCDC47-204ENST00000582252 SPNS1Q9H2V7 528 aa21.72■■□□□ 1.07
CCDC47-204ENST00000582252 DNAJB9Q9UBS3 223 aa21.72■■□□□ 1.07
CCDC47-204ENST00000582252 PCDHGB4Q9UN71 923 aa21.72■■□□□ 1.07
CCDC47-204ENST00000582252 GPSM3Q9Y4H4 160 aa21.72■■□□□ 1.07
CCDC47-204ENST00000582252 HEBP2Q9Y5Z4 205 aa21.72■■□□□ 1.07
CCDC47-204ENST00000582252 PDLIM1O00151 329 aa21.72■■□□□ 1.07
CCDC47-204ENST00000582252 ACOX3O15254 700 aa21.72■■□□□ 1.07
CCDC47-204ENST00000582252 PRSS23O95084 383 aa21.72■■□□□ 1.07
CCDC47-204ENST00000582252 NDUFV2P19404 249 aa21.72■■□□□ 1.07
CCDC47-204ENST00000582252 KIAA1024LP59773 190 aa21.72■■□□□ 1.07
CCDC47-204ENST00000582252 REEP5Q00765 189 aa21.72■■□□□ 1.07
CCDC47-204ENST00000582252 PAGE2Q7Z2X7 111 aa21.72■■□□□ 1.07
CCDC47-204ENST00000582252 CLECL1Q8IZS7 167 aa21.72■■□□□ 1.07
CCDC47-204ENST00000582252 PGBD3Q8N328 593 aa21.72■■□□□ 1.07
CCDC47-204ENST00000582252 C16orf78Q8WTQ4 265 aa21.72■■□□□ 1.07
CCDC47-204ENST00000582252 TFAP2CQ92754 450 aa21.72■■□□□ 1.07
CCDC47-204ENST00000582252 PPCDCQ96CD2 204 aa21.72■■□□□ 1.07
CCDC47-204ENST00000582252 FOXQ1Q9C009 403 aa21.72■■□□□ 1.07
CCDC47-204ENST00000582252 SUFUQ9UMX1 484 aa21.72■■□□□ 1.07
CCDC47-204ENST00000582252 WBP11Q9Y2W2 641 aaKnown RBP21.72■■□□□ 1.07
CCDC47-204ENST00000582252 B3GALT4O96024 378 aa21.71■■□□□ 1.07
CCDC47-204ENST00000582252 SERPINA1P01009 418 aa21.71■■□□□ 1.07
CCDC47-204ENST00000582252 LINGO3P0C6S8 592 aa21.71■■□□□ 1.07
CCDC47-204ENST00000582252 MAT2AP31153 395 aaKnown RBP21.71■■□□□ 1.07
CCDC47-204ENST00000582252 RPS9P46781 194 aaKnown RBP21.71■■□□□ 1.07
CCDC47-204ENST00000582252 RAB28P51157 221 aa21.71■■□□□ 1.07
CCDC47-204ENST00000582252 C2orf80Q0P641 193 aa21.71■■□□□ 1.07
CCDC47-204ENST00000582252 ANKRD26P1Q6NSI1 321 aa21.71■■□□□ 1.07
CCDC47-204ENST00000582252 ENPP6Q6UWR7 440 aa21.71■■□□□ 1.07
CCDC47-204ENST00000582252 KIAA1324Q6UXG2 1013 aaKnown RBP21.71■■□□□ 1.07
CCDC47-204ENST00000582252 TRIML2Q8N7C3 387 aa21.71■■□□□ 1.07
CCDC47-204ENST00000582252 OR4A15Q8NGL6 344 aa21.71■■□□□ 1.07
CCDC47-204ENST00000582252 PUM2Q8TB72 1066 aaKnown RBP eCLIP21.71■■□□□ 1.07
CCDC47-204ENST00000582252 SCARF2Q96GP6 870 aaPredicted RBP21.71■■□□□ 1.07
CCDC47-204ENST00000582252 CAMK1GQ96NX5 476 aa21.71■■□□□ 1.07
CCDC47-204ENST00000582252 QRFPRQ96P65 431 aa21.71■■□□□ 1.07
CCDC47-204ENST00000582252 MRPS26Q9BYN8 205 aaKnown RBP21.71■■□□□ 1.07
CCDC47-204ENST00000582252 TBC1D17Q9HA65 648 aa21.71■■□□□ 1.07
CCDC47-204ENST00000582252 TPT1P8Q9HAU6 139 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms