RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 N4BP2L2Q92802 583 aaPredicted RBP17.26■□□□□ 0.35
COMMD4-208ENST00000563220 STMN2Q93045 179 aa17.26■□□□□ 0.35
COMMD4-208ENST00000563220 ACTR10Q9NZ32 417 aa17.26■□□□□ 0.35
COMMD4-208ENST00000563220 SUCOQ9UBS9 1254 aaKnown RBP17.26■□□□□ 0.35
COMMD4-208ENST00000563220 SNX7Q9UNH6 387 aa17.26■□□□□ 0.35
COMMD4-208ENST00000563220 PLXND1Q9Y4D7 1925 aa17.25■□□□□ 0.35
COMMD4-208ENST00000563220 BCAT2O15382 392 aaPredicted RBP17.25■□□□□ 0.35
COMMD4-208ENST00000563220 DFNA5O60443 496 aa17.25■□□□□ 0.35
COMMD4-208ENST00000563220 SCN2BO60939 215 aa17.25■□□□□ 0.35
COMMD4-208ENST00000563220 CLEC3AO75596 197 aa17.25■□□□□ 0.35
COMMD4-208ENST00000563220 BCAS2O75934 225 aaPredicted RBP17.25■□□□□ 0.35
COMMD4-208ENST00000563220 SEMA3DO95025 777 aa17.25■□□□□ 0.35
COMMD4-208ENST00000563220 KCNH1O95259 989 aa17.25■□□□□ 0.35
COMMD4-208ENST00000563220 STATHP02808 62 aa17.25■□□□□ 0.35
COMMD4-208ENST00000563220 LAMP1P11279 417 aa17.25■□□□□ 0.35
COMMD4-208ENST00000563220 PIM1P11309 404 aaPredicted RBP17.25■□□□□ 0.35
COMMD4-208ENST00000563220 COX7A2P14406 83 aa17.25■□□□□ 0.35
COMMD4-208ENST00000563220 UGT2B7P16662 529 aa17.25■□□□□ 0.35
COMMD4-208ENST00000563220 TPP2P29144 1249 aaPredicted RBP17.25■□□□□ 0.35
COMMD4-208ENST00000563220 GCKP35557 465 aa17.25■□□□□ 0.35
COMMD4-208ENST00000563220 KIR3DL1P43629 444 aa17.25■□□□□ 0.35
COMMD4-208ENST00000563220 SRSF11Q05519 484 aaKnown RBP17.25■□□□□ 0.35
COMMD4-208ENST00000563220 ZNF763Q0D2J5 394 aa17.25■□□□□ 0.35
COMMD4-208ENST00000563220 SELPLGQ14242 412 aa17.25■□□□□ 0.35
COMMD4-208ENST00000563220 FLOT2Q14254 428 aa17.25■□□□□ 0.35
COMMD4-208ENST00000563220 RCN1Q15293 331 aa17.25■□□□□ 0.35
COMMD4-208ENST00000563220 ZIC1Q15915 447 aa17.25■□□□□ 0.35
COMMD4-208ENST00000563220 WDR45BQ5MNZ6 344 aa17.25■□□□□ 0.35
COMMD4-208ENST00000563220 UBE3DQ7Z6J8 389 aa17.25■□□□□ 0.35
COMMD4-208ENST00000563220 GPR180Q86V85 440 aa17.25■□□□□ 0.35
COMMD4-208ENST00000563220 ANKRD46Q86W74 232 aa17.25■□□□□ 0.35
COMMD4-208ENST00000563220 PAQR7Q86WK9 346 aa17.25■□□□□ 0.35
COMMD4-208ENST00000563220 MSRB3Q8IXL7 192 aa17.25■□□□□ 0.35
COMMD4-208ENST00000563220 C16orf78Q8WTQ4 265 aa17.25■□□□□ 0.35
COMMD4-208ENST00000563220 ASB9Q96DX5 294 aa17.25■□□□□ 0.35
COMMD4-208ENST00000563220 MACROD1Q9BQ69 325 aa17.25■□□□□ 0.35
COMMD4-208ENST00000563220 INPP5KQ9BT40 448 aa17.25■□□□□ 0.35
COMMD4-208ENST00000563220 REXO4Q9GZR2 422 aaKnown RBP17.25■□□□□ 0.35
COMMD4-208ENST00000563220 LHX9Q9NQ69 397 aa17.25■□□□□ 0.35
COMMD4-208ENST00000563220 PRMT8Q9NR22 394 aaPredicted RBP17.25■□□□□ 0.35
COMMD4-208ENST00000563220 BATF3Q9NR55 127 aa17.25■□□□□ 0.35
COMMD4-208ENST00000563220 SLC6A13Q9NSD5 602 aa17.25■□□□□ 0.35
COMMD4-208ENST00000563220 AHSPQ9NZD4 102 aa17.25■□□□□ 0.35
COMMD4-208ENST00000563220 LRRC42Q9Y546 428 aa17.25■□□□□ 0.35
COMMD4-208ENST00000563220 EML5Q05BV3 1969 aa17.25■□□□□ 0.35
COMMD4-208ENST00000563220 GSAPA4D1B5 854 aa17.24■□□□□ 0.35
COMMD4-208ENST00000563220 SCAMP2O15127 329 aaKnown RBP17.24■□□□□ 0.35
COMMD4-208ENST00000563220 SERPIND1P05546 499 aa17.24■□□□□ 0.35
COMMD4-208ENST00000563220 BSGP35613 385 aa17.24■□□□□ 0.35
COMMD4-208ENST00000563220 MAZP56270 477 aaKnown RBP17.24■□□□□ 0.35
COMMD4-208ENST00000563220 CCDC6Q16204 474 aa17.24■□□□□ 0.35
COMMD4-208ENST00000563220 GTDC1Q4AE62 458 aa17.24■□□□□ 0.35
COMMD4-208ENST00000563220 PRR23BQ6ZRT6 265 aa17.24■□□□□ 0.35
COMMD4-208ENST00000563220 GKN2Q86XP6 184 aa17.24■□□□□ 0.35
COMMD4-208ENST00000563220 TTLQ8NG68 377 aa17.24■□□□□ 0.35
COMMD4-208ENST00000563220 SLC26A7Q8TE54 656 aa17.24■□□□□ 0.35
COMMD4-208ENST00000563220 PAIP1Q9H074 479 aaKnown RBP17.24■□□□□ 0.35
COMMD4-208ENST00000563220 SLC25A37Q9NYZ2 338 aa17.24■□□□□ 0.35
COMMD4-208ENST00000563220 SPASTQ9UBP0 616 aa17.24■□□□□ 0.35
COMMD4-208ENST00000563220 MAN2B2Q9Y2E5 1009 aa17.24■□□□□ 0.35
COMMD4-208ENST00000563220 TDRD6O60522 2096 aaKnown RBP17.24■□□□□ 0.35
COMMD4-208ENST00000563220 HEATR5BQ9P2D3 2071 aa17.24■□□□□ 0.35
COMMD4-208ENST00000563220 LRIT2A6NDA9 550 aa17.24■□□□□ 0.35
COMMD4-208ENST00000563220 PPM1DO15297 605 aa17.24■□□□□ 0.35
COMMD4-208ENST00000563220 DNAJA2O60884 412 aa17.24■□□□□ 0.35
COMMD4-208ENST00000563220 HSD17B1P14061 328 aa17.24■□□□□ 0.35
COMMD4-208ENST00000563220 TAS2R50P59544 299 aa17.24■□□□□ 0.35
COMMD4-208ENST00000563220 MC1RQ01726 317 aa17.24■□□□□ 0.35
COMMD4-208ENST00000563220 HYAL2Q12891 473 aa17.24■□□□□ 0.35
COMMD4-208ENST00000563220 SRSF5Q13243 272 aaKnown RBP17.24■□□□□ 0.35
COMMD4-208ENST00000563220 DPY19L1Q2PZI1 675 aa17.24■□□□□ 0.35
COMMD4-208ENST00000563220 DNAJC14Q6Y2X3 702 aaPredicted RBP17.24■□□□□ 0.35
COMMD4-208ENST00000563220 MFSD9Q8NBP5 474 aa17.24■□□□□ 0.35
COMMD4-208ENST00000563220 OR8J2Q8NGG1 315 aa17.24■□□□□ 0.35
COMMD4-208ENST00000563220 PYDC1Q8WXC3 89 aa17.24■□□□□ 0.35
COMMD4-208ENST00000563220 MIEF2Q96C03 454 aa17.24■□□□□ 0.35
COMMD4-208ENST00000563220 ZNF570Q96NI8 536 aa17.24■□□□□ 0.35
COMMD4-208ENST00000563220 FCRL4Q96PJ5 515 aa17.24■□□□□ 0.35
COMMD4-208ENST00000563220 KCNH6Q9H252 994 aa17.24■□□□□ 0.35
COMMD4-208ENST00000563220 KLHL31Q9H511 634 aa17.24■□□□□ 0.35
COMMD4-208ENST00000563220 HRASLS2Q9NWW9 162 aa17.24■□□□□ 0.35
COMMD4-208ENST00000563220 ERVK-11Q9UQG0 969 aa17.24■□□□□ 0.35
COMMD4-208ENST00000563220 PCDHGA4Q9Y5G9 962 aa17.24■□□□□ 0.35
COMMD4-208ENST00000563220 AP1M2Q9Y6Q5 423 aa17.24■□□□□ 0.35
COMMD4-208ENST00000563220 TRBV5-3A0A0A0MS03 114 aa17.23■□□□□ 0.35
COMMD4-208ENST00000563220 FAM221BA6H8Z2 402 aa17.23■□□□□ 0.35
COMMD4-208ENST00000563220 NDUFS4O43181 175 aa17.23■□□□□ 0.35
COMMD4-208ENST00000563220 TNFSF14O43557 240 aa17.23■□□□□ 0.35
COMMD4-208ENST00000563220 MAGP20916 626 aa17.23■□□□□ 0.35
COMMD4-208ENST00000563220 PTPN6P29350 595 aa17.23■□□□□ 0.35
COMMD4-208ENST00000563220 AHRP35869 848 aa17.23■□□□□ 0.35
COMMD4-208ENST00000563220 CDKN2CP42773 168 aa17.23■□□□□ 0.35
COMMD4-208ENST00000563220 LSSP48449 732 aa17.23■□□□□ 0.35
COMMD4-208ENST00000563220 AFF3P51826 1226 aaKnown RBP17.23■□□□□ 0.35
COMMD4-208ENST00000563220 C21orf59P57076 290 aa17.23■□□□□ 0.35
COMMD4-208ENST00000563220 MTPNP58546 118 aa17.23■□□□□ 0.35
COMMD4-208ENST00000563220 HNRNPKP61978 463 aaKnown RBP eCLIP17.23■□□□□ 0.35
COMMD4-208ENST00000563220 LIPEQ05469 1076 aa17.23■□□□□ 0.35
COMMD4-208ENST00000563220 CYP4F3Q08477 520 aa17.23■□□□□ 0.35
COMMD4-208ENST00000563220 TRAP1Q12931 704 aaKnown RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms