RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 PTPN4P29074 926 aa12.76□□□□□ -0.37
CDH1-204ENST00000562118 DCDP81605 110 aaKnown RBP12.76□□□□□ -0.37
CDH1-204ENST00000562118 IRF8Q02556 426 aa12.76□□□□□ -0.37
CDH1-204ENST00000562118 DNASE1L3Q13609 305 aa12.76□□□□□ -0.37
CDH1-204ENST00000562118 DSG2Q14126 1118 aa12.76□□□□□ -0.37
CDH1-204ENST00000562118 PCLAFQ15004 111 aa12.76□□□□□ -0.37
CDH1-204ENST00000562118 NCF4Q15080 339 aa12.76□□□□□ -0.37
CDH1-204ENST00000562118 XKR6Q5GH73 641 aa12.76□□□□□ -0.37
CDH1-204ENST00000562118 PAGE2BQ5JRK9 111 aa12.76□□□□□ -0.37
CDH1-204ENST00000562118 CEP85LQ5SZL2 805 aa12.76□□□□□ -0.37
CDH1-204ENST00000562118 C10orf62Q5T681 223 aaPredicted RBP12.76□□□□□ -0.37
CDH1-204ENST00000562118 TTLL10Q6ZVT0 673 aa12.76□□□□□ -0.37
CDH1-204ENST00000562118 DTWD1Q8N5C7 304 aa12.76□□□□□ -0.37
CDH1-204ENST00000562118 IL22RA1Q8N6P7 574 aa12.76□□□□□ -0.37
CDH1-204ENST00000562118 OR52B6Q8NGF0 335 aa12.76□□□□□ -0.37
CDH1-204ENST00000562118 WDR20Q8TBZ3 569 aa12.76□□□□□ -0.37
CDH1-204ENST00000562118 ADAMTS17Q8TE56 1095 aa12.76□□□□□ -0.37
CDH1-204ENST00000562118 ZNF473Q8WTR7 871 aaKnown RBP12.76□□□□□ -0.37
CDH1-204ENST00000562118 SLC13A3Q8WWT9 602 aa12.76□□□□□ -0.37
CDH1-204ENST00000562118 UBE2E3Q969T4 207 aa12.76□□□□□ -0.37
CDH1-204ENST00000562118 TLCD1Q96CP7 247 aa12.76□□□□□ -0.37
CDH1-204ENST00000562118 MOCOSQ96EN8 888 aa12.76□□□□□ -0.37
CDH1-204ENST00000562118 PKNOX2Q96KN3 472 aa12.76□□□□□ -0.37
CDH1-204ENST00000562118 ZNF382Q96SR6 550 aa12.76□□□□□ -0.37
CDH1-204ENST00000562118 TGIF2Q9GZN2 237 aa12.76□□□□□ -0.37
CDH1-204ENST00000562118 DRC3Q9H069 523 aa12.76□□□□□ -0.37
CDH1-204ENST00000562118 GSTO2Q9H4Y5 243 aa12.76□□□□□ -0.37
CDH1-204ENST00000562118 PRORYQ9H606 182 aa12.76□□□□□ -0.37
CDH1-204ENST00000562118 IPPKQ9H8X2 491 aa12.76□□□□□ -0.37
CDH1-204ENST00000562118 VIPAS39Q9H9C1 493 aa12.76□□□□□ -0.37
CDH1-204ENST00000562118 OXSMQ9NWU1 459 aa12.76□□□□□ -0.37
CDH1-204ENST00000562118 IL17BQ9UHF5 180 aa12.76□□□□□ -0.37
CDH1-204ENST00000562118 KCND3Q9UK17 655 aa12.76□□□□□ -0.37
CDH1-204ENST00000562118 CACNA1GO43497 2377 aa12.76□□□□□ -0.37
CDH1-204ENST00000562118 LRIT2A6NDA9 550 aa12.75□□□□□ -0.37
CDH1-204ENST00000562118 C4orf51C9J302 202 aa12.75□□□□□ -0.37
CDH1-204ENST00000562118 NDUFS4O43181 175 aa12.75□□□□□ -0.37
CDH1-204ENST00000562118 H2AFYO75367 372 aaKnown RBP12.75□□□□□ -0.37
CDH1-204ENST00000562118 DHRS4L1P0CG22 281 aa12.75□□□□□ -0.37
CDH1-204ENST00000562118 PIK3CBP42338 1070 aa12.75□□□□□ -0.37
CDH1-204ENST00000562118 ARFIP1P53367 373 aa12.75□□□□□ -0.37
CDH1-204ENST00000562118 SLC18A1P54219 525 aa12.75□□□□□ -0.37
CDH1-204ENST00000562118 TMPRSS3P57727 454 aa12.75□□□□□ -0.37
CDH1-204ENST00000562118 ADNP2Q6IQ32 1131 aa12.75□□□□□ -0.37
CDH1-204ENST00000562118 NIPAL1Q6NVV3 410 aa12.75□□□□□ -0.37
CDH1-204ENST00000562118 FAM199XQ6PEV8 388 aaPredicted RBP12.75□□□□□ -0.37
CDH1-204ENST00000562118 LRRC69Q6ZNQ3 347 aa12.75□□□□□ -0.37
CDH1-204ENST00000562118 FRMD7Q6ZUT3 714 aa12.75□□□□□ -0.37
CDH1-204ENST00000562118 OVCH1Q7RTY7 1134 aa12.75□□□□□ -0.37
CDH1-204ENST00000562118 VASH2Q86V25 355 aa12.75□□□□□ -0.37
CDH1-204ENST00000562118 PDSS2Q86YH6 399 aa12.75□□□□□ -0.37
CDH1-204ENST00000562118 KCT2Q8NC54 265 aa12.75□□□□□ -0.37
CDH1-204ENST00000562118 OR7G3Q8NG95 312 aa12.75□□□□□ -0.37
CDH1-204ENST00000562118 UTP15Q8TED0 518 aaKnown RBP12.75□□□□□ -0.37
CDH1-204ENST00000562118 MAGEB10Q96LZ2 347 aaPredicted RBP12.75□□□□□ -0.37
CDH1-204ENST00000562118 SMC6Q96SB8 1091 aa12.75□□□□□ -0.37
CDH1-204ENST00000562118 RUFY1Q96T51 708 aa12.75□□□□□ -0.37
CDH1-204ENST00000562118 SPSB2Q99619 263 aa12.75□□□□□ -0.37
CDH1-204ENST00000562118 C12orf65Q9H3J6 166 aaKnown RBP12.75□□□□□ -0.37
CDH1-204ENST00000562118 NOL11Q9H8H0 719 aaKnown RBP12.75□□□□□ -0.37
CDH1-204ENST00000562118 CLK4Q9HAZ1 481 aaKnown RBP12.75□□□□□ -0.37
CDH1-204ENST00000562118 TMBIM4Q9HC24 238 aa12.75□□□□□ -0.37
CDH1-204ENST00000562118 TXLNGQ9NUQ3 528 aa12.75□□□□□ -0.37
CDH1-204ENST00000562118 ADGRE2Q9UHX3 823 aa12.75□□□□□ -0.37
CDH1-204ENST00000562118 MID2Q9UJV3 735 aa12.75□□□□□ -0.37
CDH1-204ENST00000562118 IGSF10Q6WRI0 2623 aa12.75□□□□□ -0.37
CDH1-204ENST00000562118 A0A1W2PQ72 361 aa12.74□□□□□ -0.37
CDH1-204ENST00000562118 FOXE1O00358 373 aaPredicted RBP12.74□□□□□ -0.37
CDH1-204ENST00000562118 PPP6CO00743 305 aa12.74□□□□□ -0.37
CDH1-204ENST00000562118 GALR3O60755 368 aaPredicted RBP12.74□□□□□ -0.37
CDH1-204ENST00000562118 SCELO95171 688 aa12.74□□□□□ -0.37
CDH1-204ENST00000562118 CLDN9O95484 217 aa12.74□□□□□ -0.37
CDH1-204ENST00000562118 OTCP00480 354 aa12.74□□□□□ -0.37
CDH1-204ENST00000562118 EIF2S1P05198 315 aaKnown RBP12.74□□□□□ -0.37
CDH1-204ENST00000562118 CYC1P08574 325 aa12.74□□□□□ -0.37
CDH1-204ENST00000562118 CD63P08962 238 aa12.74□□□□□ -0.37
CDH1-204ENST00000562118 MYL2P10916 166 aa12.74□□□□□ -0.37
CDH1-204ENST00000562118 TCN2P20062 427 aa12.74□□□□□ -0.37
CDH1-204ENST00000562118 AGXTP21549 392 aa12.74□□□□□ -0.37
CDH1-204ENST00000562118 HNRNPH1P31943 449 aaKnown RBP12.74□□□□□ -0.37
CDH1-204ENST00000562118 DLSTP36957 453 aa12.74□□□□□ -0.37
CDH1-204ENST00000562118 CLCQ05315 142 aa12.74□□□□□ -0.37
CDH1-204ENST00000562118 RGS1Q08116 209 aa12.74□□□□□ -0.37
CDH1-204ENST00000562118 LCP2Q13094 533 aa12.74□□□□□ -0.37
CDH1-204ENST00000562118 HERC3Q15034 1050 aa12.74□□□□□ -0.37
CDH1-204ENST00000562118 NDUFA9Q16795 377 aa12.74□□□□□ -0.37
CDH1-204ENST00000562118 BROXQ5VW32 411 aa12.74□□□□□ -0.37
CDH1-204ENST00000562118 LIPMQ5VYY2 423 aa12.74□□□□□ -0.37
CDH1-204ENST00000562118 LETMD1Q6P1Q0 360 aa12.74□□□□□ -0.37
CDH1-204ENST00000562118 MED27Q6P2C8 311 aa12.74□□□□□ -0.37
CDH1-204ENST00000562118 PRSS41Q7RTY9 318 aa12.74□□□□□ -0.37
CDH1-204ENST00000562118 SYVN1Q86TM6 617 aa12.74□□□□□ -0.37
CDH1-204ENST00000562118 TCP10LQ8TDR4 215 aa12.74□□□□□ -0.37
CDH1-204ENST00000562118 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.74□□□□□ -0.37
CDH1-204ENST00000562118 MR1Q95460 341 aa12.74□□□□□ -0.37
CDH1-204ENST00000562118 KIAA1143Q96AT1 154 aaPredicted RBP12.74□□□□□ -0.37
CDH1-204ENST00000562118 NACC2Q96BF6 587 aa12.74□□□□□ -0.37
CDH1-204ENST00000562118 MS4A6EQ96DS6 147 aa12.74□□□□□ -0.37
CDH1-204ENST00000562118 NAF1Q96HR8 494 aaKnown RBP12.74□□□□□ -0.37
CDH1-204ENST00000562118 QRFPRQ96P65 431 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms