RNA–Protein interactions for RNA: ENST00000560834.1

CTDSPL2-210, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 571 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-210ENST00000560834 CPSF6Q16630 551 aaKnown RBP eCLIP6.71□□□□□ -1.34
CTDSPL2-210ENST00000560834 HKDC1Q2TB90 917 aa6.71□□□□□ -1.34
CTDSPL2-210ENST00000560834 PRTGQ2VWP7 1150 aa6.71□□□□□ -1.34
CTDSPL2-210ENST00000560834 ZC3H12BQ5HYM0 836 aaKnown RBP6.71□□□□□ -1.34
CTDSPL2-210ENST00000560834 C3orf38Q5JPI3 329 aa6.71□□□□□ -1.34
CTDSPL2-210ENST00000560834 PAGE2BQ5JRK9 111 aa6.71□□□□□ -1.34
CTDSPL2-210ENST00000560834 COX20Q5RI15 118 aa6.71□□□□□ -1.34
CTDSPL2-210ENST00000560834 SH2D4BQ5SQS7 431 aa6.71□□□□□ -1.34
CTDSPL2-210ENST00000560834 KANK2Q63ZY3 851 aa6.71□□□□□ -1.34
CTDSPL2-210ENST00000560834 CLEC6AQ6EIG7 209 aa6.71□□□□□ -1.34
CTDSPL2-210ENST00000560834 MED27Q6P2C8 311 aa6.71□□□□□ -1.34
CTDSPL2-210ENST00000560834 TMIGD1Q6UXZ0 262 aa6.71□□□□□ -1.34
CTDSPL2-210ENST00000560834 DGLUCYQ7Z3D6 616 aa6.71□□□□□ -1.34
CTDSPL2-210ENST00000560834 MILR1Q7Z6M3 343 aa6.71□□□□□ -1.34
CTDSPL2-210ENST00000560834 MYLK4Q86YV6 388 aaPredicted RBP6.71□□□□□ -1.34
CTDSPL2-210ENST00000560834 TRIM42Q8IWZ5 723 aa6.71□□□□□ -1.34
CTDSPL2-210ENST00000560834 ZNF295-AS1Q8N0V1 137 aa6.71□□□□□ -1.34
CTDSPL2-210ENST00000560834 OR4N4Q8N0Y3 316 aa6.71□□□□□ -1.34
CTDSPL2-210ENST00000560834 KRT78Q8N1N4 520 aa6.71□□□□□ -1.34
CTDSPL2-210ENST00000560834 GALNT15Q8N3T1 639 aa6.71□□□□□ -1.34
CTDSPL2-210ENST00000560834 CHCHD4Q8N4Q1 142 aa6.71□□□□□ -1.34
CTDSPL2-210ENST00000560834 ZNF781Q8N8C0 355 aa6.71□□□□□ -1.34
CTDSPL2-210ENST00000560834 CDYL2Q8N8U2 506 aa6.71□□□□□ -1.34
CTDSPL2-210ENST00000560834 OR7G3Q8NG95 312 aa6.71□□□□□ -1.34
CTDSPL2-210ENST00000560834 OR1L3Q8NH93 324 aa6.71□□□□□ -1.34
CTDSPL2-210ENST00000560834 PPP1R14CQ8TAE6 165 aa6.71□□□□□ -1.34
CTDSPL2-210ENST00000560834 FAM76AQ8TAV0 307 aa6.71□□□□□ -1.34
CTDSPL2-210ENST00000560834 NT5CQ8TCD5 201 aa6.71□□□□□ -1.34
CTDSPL2-210ENST00000560834 DYDC1Q8WWB3 177 aa6.71□□□□□ -1.34
CTDSPL2-210ENST00000560834 ZNF75CPQ92670 426 aaPredicted RBP6.71□□□□□ -1.34
CTDSPL2-210ENST00000560834 USP7Q93009 1102 aa6.71□□□□□ -1.34
CTDSPL2-210ENST00000560834 ATP6V1E2Q96A05 226 aa6.71□□□□□ -1.34
CTDSPL2-210ENST00000560834 TM4SF19Q96DZ7 209 aa6.71□□□□□ -1.34
CTDSPL2-210ENST00000560834 MAGEB10Q96LZ2 347 aaPredicted RBP6.71□□□□□ -1.34
CTDSPL2-210ENST00000560834 C10orf90Q96M02 699 aa6.71□□□□□ -1.34
CTDSPL2-210ENST00000560834 MAGEB18Q96M61 343 aa6.71□□□□□ -1.34
CTDSPL2-210ENST00000560834 OR6C1Q96RD1 312 aa6.71□□□□□ -1.34
CTDSPL2-210ENST00000560834 SLC29A3Q9BZD2 475 aa6.71□□□□□ -1.34
CTDSPL2-210ENST00000560834 STRADBQ9C0K7 418 aa6.71□□□□□ -1.34
CTDSPL2-210ENST00000560834 PITHD1Q9GZP4 211 aaPredicted RBP6.71□□□□□ -1.34
CTDSPL2-210ENST00000560834 RHBGQ9H310 441 aa6.71□□□□□ -1.34
CTDSPL2-210ENST00000560834 CCDC134Q9H6E4 229 aa6.71□□□□□ -1.34
CTDSPL2-210ENST00000560834 MANSC1Q9H8J5 431 aa6.71□□□□□ -1.34
CTDSPL2-210ENST00000560834 DMRT3Q9NQL9 472 aa6.71□□□□□ -1.34
CTDSPL2-210ENST00000560834 FGF21Q9NSA1 209 aa6.71□□□□□ -1.34
CTDSPL2-210ENST00000560834 FARSBQ9NSD9 589 aaKnown RBP6.71□□□□□ -1.34
CTDSPL2-210ENST00000560834 ZDHHC2Q9UIJ5 367 aa6.71□□□□□ -1.34
CTDSPL2-210ENST00000560834 ZFP69BQ9UJL9 534 aa6.71□□□□□ -1.34
CTDSPL2-210ENST00000560834 PLCL2Q9UPR0 1127 aa6.71□□□□□ -1.34
CTDSPL2-210ENST00000560834 SATB2Q9UPW6 733 aa6.71□□□□□ -1.34
CTDSPL2-210ENST00000560834 TIMM22Q9Y584 194 aa6.71□□□□□ -1.34
CTDSPL2-210ENST00000560834 AP1M2Q9Y6Q5 423 aa6.71□□□□□ -1.34
CTDSPL2-210ENST00000560834 FREM2Q5SZK8 3169 aa6.71□□□□□ -1.34
CTDSPL2-210ENST00000560834 FITM1A5D6W6 292 aa6.7□□□□□ -1.34
CTDSPL2-210ENST00000560834 MANBAO00462 879 aa6.7□□□□□ -1.34
CTDSPL2-210ENST00000560834 PLD2O14939 933 aa6.7□□□□□ -1.34
CTDSPL2-210ENST00000560834 AZIN1O14977 448 aa6.7□□□□□ -1.34
CTDSPL2-210ENST00000560834 ZSCAN9O15535 394 aaPredicted RBP6.7□□□□□ -1.34
CTDSPL2-210ENST00000560834 NDUFS4O43181 175 aa6.7□□□□□ -1.34
CTDSPL2-210ENST00000560834 CLEC3AO75596 197 aa6.7□□□□□ -1.34
CTDSPL2-210ENST00000560834 SNUPNO95149 360 aaKnown RBP6.7□□□□□ -1.34
CTDSPL2-210ENST00000560834 ETHE1O95571 254 aa6.7□□□□□ -1.34
CTDSPL2-210ENST00000560834 PDYNP01213 254 aa6.7□□□□□ -1.34
CTDSPL2-210ENST00000560834 JUNP05412 331 aaKnown RBP6.7□□□□□ -1.34
CTDSPL2-210ENST00000560834 UROSP10746 265 aa6.7□□□□□ -1.34
CTDSPL2-210ENST00000560834 PCNAP12004 261 aa6.7□□□□□ -1.34
CTDSPL2-210ENST00000560834 FGF5P12034 268 aa6.7□□□□□ -1.34
CTDSPL2-210ENST00000560834 NEFHP12036 1026 aa6.7□□□□□ -1.34
CTDSPL2-210ENST00000560834 CXCR2P25025 360 aa6.7□□□□□ -1.34
CTDSPL2-210ENST00000560834 HMOX2P30519 316 aa6.7□□□□□ -1.34
CTDSPL2-210ENST00000560834 HNRNPH1P31943 449 aaKnown RBP6.7□□□□□ -1.34
CTDSPL2-210ENST00000560834 GRK3P35626 688 aa6.7□□□□□ -1.34
CTDSPL2-210ENST00000560834 AHRP35869 848 aa6.7□□□□□ -1.34
CTDSPL2-210ENST00000560834 MDH1P40925 334 aaKnown RBP6.7□□□□□ -1.34
CTDSPL2-210ENST00000560834 ID4P47928 161 aa6.7□□□□□ -1.34
CTDSPL2-210ENST00000560834 ARL4DP49703 201 aa6.7□□□□□ -1.34
CTDSPL2-210ENST00000560834 NEK2P51955 445 aa6.7□□□□□ -1.34
CTDSPL2-210ENST00000560834 ITGA1P56199 1179 aa6.7□□□□□ -1.34
CTDSPL2-210ENST00000560834 VSX2P58304 361 aaPredicted RBP6.7□□□□□ -1.34
CTDSPL2-210ENST00000560834 GUCY1A3Q02108 690 aa6.7□□□□□ -1.34
CTDSPL2-210ENST00000560834 FOXC1Q12948 553 aa6.7□□□□□ -1.34
CTDSPL2-210ENST00000560834 DDX39BQ13838 428 aaKnown RBP6.7□□□□□ -1.34
CTDSPL2-210ENST00000560834 COL9A2Q14055 689 aaPredicted RBP6.7□□□□□ -1.34
CTDSPL2-210ENST00000560834 RBBP5Q15291 538 aaKnown RBP6.7□□□□□ -1.34
CTDSPL2-210ENST00000560834 ADPRMQ3LIE5 342 aa6.7□□□□□ -1.34
CTDSPL2-210ENST00000560834 UGT3A2Q3SY77 523 aa6.7□□□□□ -1.34
CTDSPL2-210ENST00000560834 TMTC4Q5T4D3 741 aa6.7□□□□□ -1.34
CTDSPL2-210ENST00000560834 FRG2Q64ET8 278 aa6.7□□□□□ -1.34
CTDSPL2-210ENST00000560834 ATG16L1Q676U5 607 aa6.7□□□□□ -1.34
CTDSPL2-210ENST00000560834 RNF165Q6ZSG1 346 aa6.7□□□□□ -1.34
CTDSPL2-210ENST00000560834 RAB11FIP2Q7L804 512 aa6.7□□□□□ -1.34
CTDSPL2-210ENST00000560834 ASPGQ86U10 573 aa6.7□□□□□ -1.34
CTDSPL2-210ENST00000560834 MCATQ8IVS2 390 aaKnown RBP6.7□□□□□ -1.34
CTDSPL2-210ENST00000560834 DTWD1Q8N5C7 304 aa6.7□□□□□ -1.34
CTDSPL2-210ENST00000560834 CSNK1A1LQ8N752 337 aa6.7□□□□□ -1.34
CTDSPL2-210ENST00000560834 TTLQ8NG68 377 aa6.7□□□□□ -1.34
CTDSPL2-210ENST00000560834 HUS1BQ8NHY5 278 aa6.7□□□□□ -1.34
CTDSPL2-210ENST00000560834 WDR36Q8NI36 951 aaKnown RBP6.7□□□□□ -1.34
CTDSPL2-210ENST00000560834 SNIP1Q8TAD8 396 aaKnown RBP6.7□□□□□ -1.34
CTDSPL2-210ENST00000560834 AGR3Q8TD06 166 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms