RNA–Protein interactions for RNA: ENST00000559974.5

RABGGTA-212, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,963 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-212ENST00000559974 LPCAT2Q7L5N7 544 aa13.91□□□□□ -0.18
RABGGTA-212ENST00000559974 HIPK1Q86Z02 1210 aa13.91□□□□□ -0.18
RABGGTA-212ENST00000559974 YAF2Q8IY57 180 aa13.91□□□□□ -0.18
RABGGTA-212ENST00000559974 LMNTD1Q8N9Z9 388 aa13.91□□□□□ -0.18
RABGGTA-212ENST00000559974 OR10Q1Q8NGQ4 319 aa13.91□□□□□ -0.18
RABGGTA-212ENST00000559974 MBOAT4Q96T53 435 aa13.91□□□□□ -0.18
RABGGTA-212ENST00000559974 SPATA9Q9BWV2 254 aa13.91□□□□□ -0.18
RABGGTA-212ENST00000559974 FAM118AQ9NWS6 357 aa13.91□□□□□ -0.18
RABGGTA-212ENST00000559974 CORO2BQ9UQ03 480 aa13.91□□□□□ -0.18
RABGGTA-212ENST00000559974 TMEM98Q9Y2Y6 226 aa13.91□□□□□ -0.18
RABGGTA-212ENST00000559974 PCYT1BQ9Y5K3 369 aaPredicted RBP13.91□□□□□ -0.18
RABGGTA-212ENST00000559974 GMEB1Q9Y692 573 aa13.91□□□□□ -0.18
RABGGTA-212ENST00000559974 PI15O43692 258 aa13.9□□□□□ -0.18
RABGGTA-212ENST00000559974 PPIBP23284 216 aaKnown RBP13.9□□□□□ -0.18
RABGGTA-212ENST00000559974 SLC5A2P31639 672 aa13.9□□□□□ -0.18
RABGGTA-212ENST00000559974 KDELR2P33947 212 aa13.9□□□□□ -0.18
RABGGTA-212ENST00000559974 SHMT2P34897 504 aa13.9□□□□□ -0.18
RABGGTA-212ENST00000559974 GJA4P35212 333 aa13.9□□□□□ -0.18
RABGGTA-212ENST00000559974 HLCSP50747 726 aa13.9□□□□□ -0.18
RABGGTA-212ENST00000559974 PPP1R8Q12972 351 aaKnown RBP13.9□□□□□ -0.18
RABGGTA-212ENST00000559974 RPA4Q13156 261 aa13.9□□□□□ -0.18
RABGGTA-212ENST00000559974 BIRC2Q13490 618 aa13.9□□□□□ -0.18
RABGGTA-212ENST00000559974 RUNX3Q13761 415 aa13.9□□□□□ -0.18
RABGGTA-212ENST00000559974 ZBED5Q49AG3 693 aa13.9□□□□□ -0.18
RABGGTA-212ENST00000559974 FAM46CQ5VWP2 391 aa13.9□□□□□ -0.18
RABGGTA-212ENST00000559974 COMMD6Q7Z4G1 85 aa13.9□□□□□ -0.18
RABGGTA-212ENST00000559974 PDZD3Q86UT5 571 aa13.9□□□□□ -0.18
RABGGTA-212ENST00000559974 HEATR4Q86WZ0 1026 aa13.9□□□□□ -0.18
RABGGTA-212ENST00000559974 CHPFQ8IZ52 775 aa13.9□□□□□ -0.18
RABGGTA-212ENST00000559974 C8orf59Q8N0T1 100 aaPredicted RBP13.9□□□□□ -0.18
RABGGTA-212ENST00000559974 ZNF555Q8NEP9 628 aa13.9□□□□□ -0.18
RABGGTA-212ENST00000559974 PNPT1Q8TCS8 783 aaKnown RBP13.9□□□□□ -0.18
RABGGTA-212ENST00000559974 SETD7Q8WTS6 366 aaKnown RBP13.9□□□□□ -0.18
RABGGTA-212ENST00000559974 RAD51AP1Q96B01 352 aa13.9□□□□□ -0.18
RABGGTA-212ENST00000559974 TBC1D20Q96BZ9 403 aa13.9□□□□□ -0.18
RABGGTA-212ENST00000559974 NPLQ9BXD5 320 aaPredicted RBP13.9□□□□□ -0.18
RABGGTA-212ENST00000559974 ING2Q9H160 280 aa13.9□□□□□ -0.18
RABGGTA-212ENST00000559974 IFT80Q9P2H3 777 aaPredicted RBP13.9□□□□□ -0.18
RABGGTA-212ENST00000559974 ATP6V1HQ9UI12 483 aa13.9□□□□□ -0.18
RABGGTA-212ENST00000559974 HCN2Q9UL51 889 aa13.9□□□□□ -0.18
RABGGTA-212ENST00000559974 ASF1AQ9Y294 204 aa13.9□□□□□ -0.18
RABGGTA-212ENST00000559974 PRKAB1Q9Y478 270 aa13.9□□□□□ -0.18
RABGGTA-212ENST00000559974 RNASET2O00584 256 aaKnown RBP13.89□□□□□ -0.19
RABGGTA-212ENST00000559974 HS6ST1O60243 411 aa13.89□□□□□ -0.19
RABGGTA-212ENST00000559974 SEMG1P04279 462 aa13.89□□□□□ -0.19
RABGGTA-212ENST00000559974 ELK4P28324 431 aa13.89□□□□□ -0.19
RABGGTA-212ENST00000559974 VEZF1Q14119 521 aa13.89□□□□□ -0.19
RABGGTA-212ENST00000559974 PRAMEF14Q5SWL7 426 aa13.89□□□□□ -0.19
RABGGTA-212ENST00000559974 PRAMEF13Q5VWM6 474 aa13.89□□□□□ -0.19
RABGGTA-212ENST00000559974 PNCKQ6P2M8 343 aa13.89□□□□□ -0.19
RABGGTA-212ENST00000559974 SHQ1Q6PI26 577 aaKnown RBP13.89□□□□□ -0.19
RABGGTA-212ENST00000559974 ARMCX6Q7L4S7 300 aa13.89□□□□□ -0.19
RABGGTA-212ENST00000559974 THAP5Q7Z6K1 395 aa13.89□□□□□ -0.19
RABGGTA-212ENST00000559974 AMZ2Q86W34 360 aa13.89□□□□□ -0.19
RABGGTA-212ENST00000559974 SYNPOQ8N3V7 929 aa13.89□□□□□ -0.19
RABGGTA-212ENST00000559974 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.89□□□□□ -0.19
RABGGTA-212ENST00000559974 ZFP90Q8TF47 636 aa13.89□□□□□ -0.19
RABGGTA-212ENST00000559974 UBE2E3Q969T4 207 aa13.89□□□□□ -0.19
RABGGTA-212ENST00000559974 DPH2Q9BQC3 489 aaPredicted RBP13.89□□□□□ -0.19
RABGGTA-212ENST00000559974 AMBRA1Q9C0C7 1298 aa13.89□□□□□ -0.19
RABGGTA-212ENST00000559974 BHLHE41Q9C0J9 482 aaPredicted RBP13.89□□□□□ -0.19
RABGGTA-212ENST00000559974 CHST8Q9H2A9 424 aa13.89□□□□□ -0.19
RABGGTA-212ENST00000559974 SPNS1Q9H2V7 528 aa13.89□□□□□ -0.19
RABGGTA-212ENST00000559974 REEP4Q9H6H4 257 aa13.89□□□□□ -0.19
RABGGTA-212ENST00000559974 IL1RAPQ9NPH3 570 aa13.89□□□□□ -0.19
RABGGTA-212ENST00000559974 SH3BP4Q9P0V3 963 aa13.89□□□□□ -0.19
RABGGTA-212ENST00000559974 ZNF282Q9UDV7 671 aaPredicted RBP13.89□□□□□ -0.19
RABGGTA-212ENST00000559974 C3orf18Q9UK00 162 aa13.89□□□□□ -0.19
RABGGTA-212ENST00000559974 FZD4Q9ULV1 537 aa13.89□□□□□ -0.19
RABGGTA-212ENST00000559974 VPS4AQ9UN37 437 aa13.89□□□□□ -0.19
RABGGTA-212ENST00000559974 EXO1Q9UQ84 846 aaKnown RBP13.89□□□□□ -0.19
RABGGTA-212ENST00000559974 PLXND1Q9Y4D7 1925 aa13.89□□□□□ -0.19
RABGGTA-212ENST00000559974 KAT7O95251 611 aa13.89□□□□□ -0.19
RABGGTA-212ENST00000559974 TGFB1P01137 390 aa13.89□□□□□ -0.19
RABGGTA-212ENST00000559974 PCCBP05166 539 aa13.89□□□□□ -0.19
RABGGTA-212ENST00000559974 KELP23276 732 aa13.89□□□□□ -0.19
RABGGTA-212ENST00000559974 PIK3CBP42338 1070 aa13.89□□□□□ -0.19
RABGGTA-212ENST00000559974 YAP1P46937 504 aaKnown RBP13.89□□□□□ -0.19
RABGGTA-212ENST00000559974 PHEXP78562 749 aa13.89□□□□□ -0.19
RABGGTA-212ENST00000559974 MEF2AQ02078 507 aaPredicted RBP13.89□□□□□ -0.19
RABGGTA-212ENST00000559974 KCNAB2Q13303 367 aa13.89□□□□□ -0.19
RABGGTA-212ENST00000559974 GAB1Q13480 694 aa13.89□□□□□ -0.19
RABGGTA-212ENST00000559974 EGFLAMQ63HQ2 1017 aa13.89□□□□□ -0.19
RABGGTA-212ENST00000559974 ANKRD34AQ69YU3 496 aa13.89□□□□□ -0.19
RABGGTA-212ENST00000559974 LCTLQ6UWM7 567 aa13.89□□□□□ -0.19
RABGGTA-212ENST00000559974 CBLL1Q75N03 491 aa13.89□□□□□ -0.19
RABGGTA-212ENST00000559974 DCUN1D3Q8IWE4 304 aa13.89□□□□□ -0.19
RABGGTA-212ENST00000559974 ARL10Q8N8L6 244 aa13.89□□□□□ -0.19
RABGGTA-212ENST00000559974 OR4A15Q8NGL6 344 aa13.89□□□□□ -0.19
RABGGTA-212ENST00000559974 OR5AR1Q8NGP9 310 aa13.89□□□□□ -0.19
RABGGTA-212ENST00000559974 IL17FQ96PD4 163 aa13.89□□□□□ -0.19
RABGGTA-212ENST00000559974 VNN3Q9NY84 501 aa13.89□□□□□ -0.19
RABGGTA-212ENST00000559974 ABCG2Q9UNQ0 655 aa13.89□□□□□ -0.19
RABGGTA-212ENST00000559974 TSC22D4Q9Y3Q8 395 aa13.89□□□□□ -0.19
RABGGTA-212ENST00000559974 U3KQV3 271 aa13.89□□□□□ -0.19
RABGGTA-212ENST00000559974 SHISA7A6NL88 538 aa13.88□□□□□ -0.19
RABGGTA-212ENST00000559974 TRMUO75648 421 aaKnown RBP13.88□□□□□ -0.19
RABGGTA-212ENST00000559974 ABCB1P08183 1280 aaPredicted RBP13.88□□□□□ -0.19
RABGGTA-212ENST00000559974 PRKACGP22612 351 aa13.88□□□□□ -0.19
RABGGTA-212ENST00000559974 PCSK6P29122 969 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms