RNA–Protein interactions for RNA: ENST00000556951.5

PSEN1-219, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-219ENST00000556951 PARP9Q8IXQ6 854 aa12.12□□□□□ -0.47
PSEN1-219ENST00000556951 CENPLQ8N0S6 344 aaPredicted RBP12.12□□□□□ -0.47
PSEN1-219ENST00000556951 NKAPQ8N5F7 415 aaKnown RBP12.12□□□□□ -0.47
PSEN1-219ENST00000556951 CCDC63Q8NA47 563 aa12.12□□□□□ -0.47
PSEN1-219ENST00000556951 CHDHQ8NE62 594 aaPredicted RBP12.12□□□□□ -0.47
PSEN1-219ENST00000556951 LRRC8CQ8TDW0 803 aa12.12□□□□□ -0.47
PSEN1-219ENST00000556951 LCN9Q8WX39 176 aa12.12□□□□□ -0.47
PSEN1-219ENST00000556951 ZNF75CPQ92670 426 aaPredicted RBP12.12□□□□□ -0.47
PSEN1-219ENST00000556951 NXNL1Q96CM4 212 aa12.12□□□□□ -0.47
PSEN1-219ENST00000556951 DCUN1D1Q96GG9 259 aa12.12□□□□□ -0.47
PSEN1-219ENST00000556951 CCDC120Q96HB5 630 aa12.12□□□□□ -0.47
PSEN1-219ENST00000556951 SCYL1Q96KG9 808 aa12.12□□□□□ -0.47
PSEN1-219ENST00000556951 ZNF317Q96PQ6 595 aaPredicted RBP12.12□□□□□ -0.47
PSEN1-219ENST00000556951 TAAR6Q96RI8 345 aa12.12□□□□□ -0.47
PSEN1-219ENST00000556951 MRPL57Q9BQC6 102 aaKnown RBP12.12□□□□□ -0.47
PSEN1-219ENST00000556951 SLC7A5P2Q9GIP4 190 aa12.12□□□□□ -0.47
PSEN1-219ENST00000556951 SRMSQ9H3Y6 488 aa12.12□□□□□ -0.47
PSEN1-219ENST00000556951 MANSC1Q9H8J5 431 aa12.12□□□□□ -0.47
PSEN1-219ENST00000556951 MCCC2Q9HCC0 563 aa12.12□□□□□ -0.47
PSEN1-219ENST00000556951 ZNF358Q9NW07 568 aa12.12□□□□□ -0.47
PSEN1-219ENST00000556951 IFT80Q9P2H3 777 aaPredicted RBP12.12□□□□□ -0.47
PSEN1-219ENST00000556951 KLHL42Q9P2K6 505 aa12.12□□□□□ -0.47
PSEN1-219ENST00000556951 DHCR7Q9UBM7 475 aaKnown RBP12.12□□□□□ -0.47
PSEN1-219ENST00000556951 TRMT6Q9UJA5 497 aaKnown RBP12.12□□□□□ -0.47
PSEN1-219ENST00000556951 FBXL4Q9UKA2 621 aa12.12□□□□□ -0.47
PSEN1-219ENST00000556951 DHRS7Q9Y394 339 aa12.12□□□□□ -0.47
PSEN1-219ENST00000556951 CCDC189A1A4V9 331 aa12.11□□□□□ -0.47
PSEN1-219ENST00000556951 GSAPA4D1B5 854 aa12.11□□□□□ -0.47
PSEN1-219ENST00000556951 E5RI56 91 aa12.11□□□□□ -0.47
PSEN1-219ENST00000556951 MATN2O00339 956 aa12.11□□□□□ -0.47
PSEN1-219ENST00000556951 WISP2O76076 250 aa12.11□□□□□ -0.47
PSEN1-219ENST00000556951 AP2A2O94973 939 aa12.11□□□□□ -0.47
PSEN1-219ENST00000556951 VIMP08670 466 aaKnown RBP12.11□□□□□ -0.47
PSEN1-219ENST00000556951 CD63P08962 238 aa12.11□□□□□ -0.47
PSEN1-219ENST00000556951 ATXN8OSP0DMR3 200 aa12.11□□□□□ -0.47
PSEN1-219ENST00000556951 RALBP11234 206 aa12.11□□□□□ -0.47
PSEN1-219ENST00000556951 GMPRP36959 345 aa12.11□□□□□ -0.47
PSEN1-219ENST00000556951 PGGT1BP53609 377 aa12.11□□□□□ -0.47
PSEN1-219ENST00000556951 SEC24CP53992 1094 aa12.11□□□□□ -0.47
PSEN1-219ENST00000556951 DLG1Q12959 904 aa12.11□□□□□ -0.47
PSEN1-219ENST00000556951 PRKAA1Q13131 559 aa12.11□□□□□ -0.47
PSEN1-219ENST00000556951 CSHL1Q14406 222 aa12.11□□□□□ -0.47
PSEN1-219ENST00000556951 CYP2A13Q16696 494 aa12.11□□□□□ -0.47
PSEN1-219ENST00000556951 NKAIN1Q4KMZ8 207 aa12.11□□□□□ -0.47
PSEN1-219ENST00000556951 ZNF658BQ4V348 819 aaPredicted RBP12.11□□□□□ -0.47
PSEN1-219ENST00000556951 LRRC8EQ6NSJ5 796 aa12.11□□□□□ -0.47
PSEN1-219ENST00000556951 PAQR3Q6TCH7 311 aa12.11□□□□□ -0.47
PSEN1-219ENST00000556951 KIRREL2Q6UWL6 708 aa12.11□□□□□ -0.47
PSEN1-219ENST00000556951 TMEM207Q6UWW9 146 aa12.11□□□□□ -0.47
PSEN1-219ENST00000556951 DET1Q7L5Y6 550 aa12.11□□□□□ -0.47
PSEN1-219ENST00000556951 PHC3Q8NDX5 983 aa12.11□□□□□ -0.47
PSEN1-219ENST00000556951 FLVCR1-AS1Q8TAF5 88 aa12.11□□□□□ -0.47
PSEN1-219ENST00000556951 RAB3IL1Q8TBN0 382 aa12.11□□□□□ -0.47
PSEN1-219ENST00000556951 ANKRD49Q8WVL7 239 aa12.11□□□□□ -0.47
PSEN1-219ENST00000556951 LINC00615Q96LM1 132 aaPredicted RBP12.11□□□□□ -0.47
PSEN1-219ENST00000556951 GPR21Q99679 349 aa12.11□□□□□ -0.47
PSEN1-219ENST00000556951 C17orf62Q9BQA9 187 aa12.11□□□□□ -0.47
PSEN1-219ENST00000556951 TFB2MQ9H5Q4 396 aaKnown RBP12.11□□□□□ -0.47
PSEN1-219ENST00000556951 OLAHQ9NV23 265 aa12.11□□□□□ -0.47
PSEN1-219ENST00000556951 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.11□□□□□ -0.47
PSEN1-219ENST00000556951 FAM8A1Q9UBU6 413 aa12.11□□□□□ -0.47
PSEN1-219ENST00000556951 GPN3Q9UHW5 284 aaPredicted RBP12.11□□□□□ -0.47
PSEN1-219ENST00000556951 MED16Q9Y2X0 877 aa12.11□□□□□ -0.47
PSEN1-219ENST00000556951 PCDHGB6Q9Y5F9 930 aa12.11□□□□□ -0.47
PSEN1-219ENST00000556951 PRSS21Q9Y6M0 314 aa12.11□□□□□ -0.47
PSEN1-219ENST00000556951 AP1M2Q9Y6Q5 423 aa12.11□□□□□ -0.47
PSEN1-219ENST00000556951 COLEC10Q9Y6Z7 277 aa12.11□□□□□ -0.47
PSEN1-219ENST00000556951 ABCA4P78363 2273 aa12.11□□□□□ -0.47
PSEN1-219ENST00000556951 NUP210LQ5VU65 1888 aa12.1□□□□□ -0.47
PSEN1-219ENST00000556951 C19orf84I3L1E1 186 aa12.1□□□□□ -0.47
PSEN1-219ENST00000556951 KLF11O14901 512 aa12.1□□□□□ -0.47
PSEN1-219ENST00000556951 NIPSNAP2O75323 286 aa12.1□□□□□ -0.47
PSEN1-219ENST00000556951 OR2B3O76000 313 aa12.1□□□□□ -0.47
PSEN1-219ENST00000556951 ONECUT2O95948 504 aa12.1□□□□□ -0.47
PSEN1-219ENST00000556951 OR56A5P0C7T3 313 aa12.1□□□□□ -0.47
PSEN1-219ENST00000556951 MYL2P10916 166 aa12.1□□□□□ -0.47
PSEN1-219ENST00000556951 ATP1B2P14415 290 aaPredicted RBP12.1□□□□□ -0.47
PSEN1-219ENST00000556951 MSH3P20585 1137 aa12.1□□□□□ -0.47
PSEN1-219ENST00000556951 DRD4P21917 467 aa12.1□□□□□ -0.47
PSEN1-219ENST00000556951 MMP11P24347 488 aa12.1□□□□□ -0.47
PSEN1-219ENST00000556951 ALDH3A1P30838 453 aa12.1□□□□□ -0.47
PSEN1-219ENST00000556951 CLCN7P51798 805 aa12.1□□□□□ -0.47
PSEN1-219ENST00000556951 PRKAA2P54646 552 aa12.1□□□□□ -0.47
PSEN1-219ENST00000556951 IL2P60568 153 aa12.1□□□□□ -0.47
PSEN1-219ENST00000556951 ATP6V0D1P61421 351 aa12.1□□□□□ -0.47
PSEN1-219ENST00000556951 TLR1Q15399 786 aa12.1□□□□□ -0.47
PSEN1-219ENST00000556951 CDSNQ15517 529 aa12.1□□□□□ -0.47
PSEN1-219ENST00000556951 DEFB110Q30KQ9 67 aa12.1□□□□□ -0.47
PSEN1-219ENST00000556951 BCL7AQ4VC05 210 aa12.1□□□□□ -0.47
PSEN1-219ENST00000556951 AGAP7PQ5VUJ5 663 aa12.1□□□□□ -0.47
PSEN1-219ENST00000556951 ATG16L1Q676U5 607 aa12.1□□□□□ -0.47
PSEN1-219ENST00000556951 FCRL6Q6DN72 434 aa12.1□□□□□ -0.47
PSEN1-219ENST00000556951 ZYG11AQ6WRX3 759 aa12.1□□□□□ -0.47
PSEN1-219ENST00000556951 Q71RC1 249 aaPredicted RBP12.1□□□□□ -0.47
PSEN1-219ENST00000556951 CPLX4Q7Z7G2 160 aa12.1□□□□□ -0.47
PSEN1-219ENST00000556951 TRIM73Q86UV7 250 aa12.1□□□□□ -0.47
PSEN1-219ENST00000556951 CFAP206Q8IYR0 622 aa12.1□□□□□ -0.47
PSEN1-219ENST00000556951 LRRC34Q8IZ02 419 aa12.1□□□□□ -0.47
PSEN1-219ENST00000556951 GPR135Q8IZ08 494 aa12.1□□□□□ -0.47
PSEN1-219ENST00000556951 SPATA6LQ8N4H0 392 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms